| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is 146301820
Identifier: 146301820
GI number: 146301820
Start: 4886574
End: 4887992
Strand: Reverse
Name: 146301820
Synonym: Fjoh_4084
Alternate gene names: NA
Gene position: 4887992-4886574 (Counterclockwise)
Preceding gene: 146301821
Following gene: 146301819
Centisome position: 80.17
GC content: 36.93
Gene sequence:
>1419_bases ATGAAAAAAATAAAATACATCTTCTTAGTTTCCATTTTTGCTTTGACATTTGCCAATGCGCAAAGCACTTCTGATACTAA TTTTAGAAAGCCAGTATCAGAAACATTGAAAAAAATAGAAACTCTTTTTAGTGTAACGATCAACGACGACAGAGGTTTAT TAAAAGGAAAAGAACTGGATTATTCCGATTGGAGAATTGAACCTGGAAATCTGCCACTTTCGCTGACTAATATTCTAGCG CCGTTTGAATTGATGTATTTTAAACAACCCGATGGAACCTACATCATACGCAAGTATGAAAACCATAAAGTTTCGGTAGA TAAAGGAAAGGAACGCTTGTTTTACTTAGAAAGCCTTTACTCAACCAAGGAAGAATGGGAAAAACGTAAAACGGAGTTAA AAGCTTGTATGATTGAATCATTTGGTTTGGATAAGGCGCCCCCTACACCAAAGTCTAAACCACTTTTAACTCCAAAAAGA ATTTATAAAGATTACAGTGTCGAAAATATTGCATTGGAAATTTTGCCTGGTGTTTATGCGACAGGATCGATTTACAAACC ATATCCGTTAAATAAAAAAGCAGCTGTTATTTTAACTCCTGACGGACATTTTGGCGACGGAAGATATAGAAAAGACGAAC AATATCGTTGTGCAATGATGGCAAAAATGGGCGCAATTGTGGTAGGTTACGATTTATTTGCTTGGGGAGAATCGTTACTA CAATTTCCAGAAGAAACACATAGAAACAGCATTGCATCTACGGTTCAGGTTTTAACTGGAATTCGTTTATTGGATTATTT GGCAACAGTTAAGGATGCTGATATGACAAGAGTTGGCGTTACTGGAGGTTCTGGTGGAGGATCGCACACGATGTTTTTAG CCGCAATTGATGACAGAGTAAAAGTTTCAGCTCCAGTTGTAATGGTTTCTTCTCATTTCTCAGGCGGTTGTCCATGCGAA AGTGGTCGTGGAATTCACCTTTGTGGAAACGGAACAAACAACGCCGAAATCTCTGCAATGATGGCGCCAAAACCACAATT GATTGTTTCTGATGGAAAAGACTGGACTTTGGCAGTTCCGGAATTGGAATTTCCTTTTATCCAAAGAACGTATGAATTAT ACGGAAAGAAAGATTTAGTCGAAAATGCACATTTTGGAAAAGAAGGCCATGATTTCGGAATCTCGAAACGTATGGCTTTG TATCCGTTTATGGCGAAATATTTAAATCTAGATTTGGATAAAGTGAAGAACGACAAAGGCGAAATCGACGAATCGACTTG TGTAATTGAACCAAAAGAAAAGTTGTTTGTTTTTGGAGATAAAGGTGAAAAACTGCCGAAAAACGCTTTGAAAGACATCA ACAAATTATATGAAATGTTTGGAGAAAAAAATCTGAAAGTTTACGAGGTTAAGAAGTAA
Upstream 100 bases:
>100_bases GATTTTTTTATTTGTTTTAGGGAAAAGAAAATCCGTTTTAATCCGCGTCTTTACGAAGTAAATCCGTTTCATCAGCGTAC CAACACACAACAATATTAAA
Downstream 100 bases:
>100_bases TAGAGTTTGCCACGAATTACACGAATTGGCACGAATTATTTTTTTACCACAGATTACACAGCTTAGAAGGATTTTTTTAT CTCCTTAATCTGCAAAATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 472; Mature: 472
Protein sequence:
>472_residues MKKIKYIFLVSIFALTFANAQSTSDTNFRKPVSETLKKIETLFSVTINDDRGLLKGKELDYSDWRIEPGNLPLSLTNILA PFELMYFKQPDGTYIIRKYENHKVSVDKGKERLFYLESLYSTKEEWEKRKTELKACMIESFGLDKAPPTPKSKPLLTPKR IYKDYSVENIALEILPGVYATGSIYKPYPLNKKAAVILTPDGHFGDGRYRKDEQYRCAMMAKMGAIVVGYDLFAWGESLL QFPEETHRNSIASTVQVLTGIRLLDYLATVKDADMTRVGVTGGSGGGSHTMFLAAIDDRVKVSAPVVMVSSHFSGGCPCE SGRGIHLCGNGTNNAEISAMMAPKPQLIVSDGKDWTLAVPELEFPFIQRTYELYGKKDLVENAHFGKEGHDFGISKRMAL YPFMAKYLNLDLDKVKNDKGEIDESTCVIEPKEKLFVFGDKGEKLPKNALKDINKLYEMFGEKNLKVYEVKK
Sequences:
>Translated_472_residues MKKIKYIFLVSIFALTFANAQSTSDTNFRKPVSETLKKIETLFSVTINDDRGLLKGKELDYSDWRIEPGNLPLSLTNILA PFELMYFKQPDGTYIIRKYENHKVSVDKGKERLFYLESLYSTKEEWEKRKTELKACMIESFGLDKAPPTPKSKPLLTPKR IYKDYSVENIALEILPGVYATGSIYKPYPLNKKAAVILTPDGHFGDGRYRKDEQYRCAMMAKMGAIVVGYDLFAWGESLL QFPEETHRNSIASTVQVLTGIRLLDYLATVKDADMTRVGVTGGSGGGSHTMFLAAIDDRVKVSAPVVMVSSHFSGGCPCE SGRGIHLCGNGTNNAEISAMMAPKPQLIVSDGKDWTLAVPELEFPFIQRTYELYGKKDLVENAHFGKEGHDFGISKRMAL YPFMAKYLNLDLDKVKNDKGEIDESTCVIEPKEKLFVFGDKGEKLPKNALKDINKLYEMFGEKNLKVYEVKK >Mature_472_residues MKKIKYIFLVSIFALTFANAQSTSDTNFRKPVSETLKKIETLFSVTINDDRGLLKGKELDYSDWRIEPGNLPLSLTNILA PFELMYFKQPDGTYIIRKYENHKVSVDKGKERLFYLESLYSTKEEWEKRKTELKACMIESFGLDKAPPTPKSKPLLTPKR IYKDYSVENIALEILPGVYATGSIYKPYPLNKKAAVILTPDGHFGDGRYRKDEQYRCAMMAKMGAIVVGYDLFAWGESLL QFPEETHRNSIASTVQVLTGIRLLDYLATVKDADMTRVGVTGGSGGGSHTMFLAAIDDRVKVSAPVVMVSSHFSGGCPCE SGRGIHLCGNGTNNAEISAMMAPKPQLIVSDGKDWTLAVPELEFPFIQRTYELYGKKDLVENAHFGKEGHDFGISKRMAL YPFMAKYLNLDLDKVKNDKGEIDESTCVIEPKEKLFVFGDKGEKLPKNALKDINKLYEMFGEKNLKVYEVKK
Specific function: Unknown
COG id: COG1073
COG function: function code R; Hydrolases of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53148; Mature: 53148
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIKYIFLVSIFALTFANAQSTSDTNFRKPVSETLKKIETLFSVTINDDRGLLKGKELD CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCCCCCCCCC YSDWRIEPGNLPLSLTNILAPFELMYFKQPDGTYIIRKYENHKVSVDKGKERLFYLESLY CCCCEECCCCCCEEHHHHHCCEEEEEEECCCCCEEEEEECCCEEEECCCCHHHHHHHHHH STKEEWEKRKTELKACMIESFGLDKAPPTPKSKPLLTPKRIYKDYSVENIALEILPGVYA CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEECCCCEE TGSIYKPYPLNKKAAVILTPDGHFGDGRYRKDEQYRCAMMAKMGAIVVGYDLFAWGESLL CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEHHHHHHHHHHH QFPEETHRNSIASTVQVLTGIRLLDYLATVKDADMTRVGVTGGSGGGSHTMFLAAIDDRV HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEEECCCE KVSAPVVMVSSHFSGGCPCESGRGIHLCGNGTNNAEISAMMAPKPQLIVSDGKDWTLAVP EECCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCEEEECCCCEEEECC ELEFPFIQRTYELYGKKDLVENAHFGKEGHDFGISKRMALYPFMAKYLNLDLDKVKNDKG CCCCHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCC EIDESTCVIEPKEKLFVFGDKGEKLPKNALKDINKLYEMFGEKNLKVYEVKK CCCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECC >Mature Secondary Structure MKKIKYIFLVSIFALTFANAQSTSDTNFRKPVSETLKKIETLFSVTINDDRGLLKGKELD CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCCCCCCCCC YSDWRIEPGNLPLSLTNILAPFELMYFKQPDGTYIIRKYENHKVSVDKGKERLFYLESLY CCCCEECCCCCCEEHHHHHCCEEEEEEECCCCCEEEEEECCCEEEECCCCHHHHHHHHHH STKEEWEKRKTELKACMIESFGLDKAPPTPKSKPLLTPKRIYKDYSVENIALEILPGVYA CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEECCCCEE TGSIYKPYPLNKKAAVILTPDGHFGDGRYRKDEQYRCAMMAKMGAIVVGYDLFAWGESLL CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEHHHHHHHHHHH QFPEETHRNSIASTVQVLTGIRLLDYLATVKDADMTRVGVTGGSGGGSHTMFLAAIDDRV HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEEECCCE KVSAPVVMVSSHFSGGCPCESGRGIHLCGNGTNNAEISAMMAPKPQLIVSDGKDWTLAVP EECCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCEEEECCCCEEEECC ELEFPFIQRTYELYGKKDLVENAHFGKEGHDFGISKRMALYPFMAKYLNLDLDKVKNDKG CCCCHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCC EIDESTCVIEPKEKLFVFGDKGEKLPKNALKDINKLYEMFGEKNLKVYEVKK CCCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA