Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301819

Identifier: 146301819

GI number: 146301819

Start: 4883848

End: 4886298

Strand: Reverse

Name: 146301819

Synonym: Fjoh_4083

Alternate gene names: NA

Gene position: 4886298-4883848 (Counterclockwise)

Preceding gene: 146301820

Following gene: 146301818

Centisome position: 80.14

GC content: 38.56

Gene sequence:

>2451_bases
ATGGGATTGAAAATTAAAATAACTGCGATTTGTTTTGGAATTTTTTCCTTGACAGCAACAGCACAAAGTGACCTAAAATT
ATGGTACGATAAACCCGCATCCATCTGGAACGAAGCTCTACCTTTAGGTAACGGACGTTTGGGCGCAATGGTTTTTGGAG
ATCCAGCGGTAGAACGTTTGCAATTGAACGAAGAAACGATTTGGGCAGGTTCTCCAAACGGCAATGCACATAATAAATCT
ATTAAAGCACTTCCAATTGTTCGTCAGTTAATTTTTGACGGAAAATTTGATGAAGCGCAGGATTTGGCAACGCAGGATAT
TATGTCGCAAACCAATGACGGTATGCCGTATCAGACTTTCGGAAGCGTTTATATTTCATTCGCAGGACATCAAAAATATG
CGGATTATTATCGTGATTTAGATATCAGCAATGCTACGGCAAAAGTAAAATACAAAGTAAATGGCGTTGAATTTACAAGA
GAAATTCTAACTGCATTTTCAGATCAGGTTATTGTGGTGAAACTTTCTGCTAGTCAGCCGGGACAGATTACTTGTAATGT
TTTCATGAACAGTCCAATTGATAAAACGGTGGCTTCGACAGAAGGAAACCAGATTATACTTTCAGGAGTTGGAACTAATT
TTGAAGGCGTAAAAGGAAAAGTAAAATTTCAAGGCCGATTAACGGCTAAAAACAAAGGCGGTGAAATCGATGCCAGCAAC
GGTGTTTTAAGTATCAACAAAGCCGATGAAGTGACTTTGTACATTTCGATTGCAACCAATTTCAAAAATTATCAGGATAT
TTCAGGAGATGAAATTGCAAAAAGCAAAGATTATTTGGCTAAAGCCGAAGTAAAAGATTTTGAAACGATTAAGAAAGCCC
ACGTTGATTATTACCAGAAATTCTTCAACAGAGTTTCTTTAAATTTAGGTTCAAATGATTTGGTTAAGAAACCCACAAAC
GAAAGAATCCGAGATTTCTCTAAACAATTTGATCCGCAATTGGCGAGTTTGTATTTCCAGTTTGGACGTTATCTTTTAAT
TTCAAGTTCGCAACCAGGTGGTCAGCCAGCCAATTTGCAAGGAATCTGGAACGATATGGTCACACCGCCTTGGGATAGTA
AATACACAACAAACATCAATGCCGAAATGAATTATTGGCCGGCACAAGTAACCAATTTGCAGGAAATGCATGAGCCTTTT
GTGCAAATGGCAAAAGAGTTAGCGGTAACTGGTGCAGAAACTGCCAAAACAATGTACAATGCCAGCGGTTGGGTTTTACA
TCACAACACTGATATTTGGCGTGTTACAGCTCCGGTAGATTCAGCTGCGTCGGGAATGTGGCCGACAGGTGGCGCTTGGG
TTTGTCAGGATTTATGGGAAAGATATTTATATACAGGAGACAAAAAGTATTTAGTAGAAATTTATCCAATCATGAAAGGT
GCGGCCGATTTCTTTTTGGATTTTATGGTTATTGATCCTAATACAAAATATTTAGTTGTTGTTCCTTCGAGTTCTCCTGA
AAACACACACGCAGGCGGAACAGGAAAAGCAACAATTGCATCAGGAACAACAATGGATAATCAGCTGGTTTTTGATTTGT
TTACACATGTTATCGAAGCTTCGGCTTTGGTTTCGCCAGATGTGGCTTATGCCAAAAAAGTGAGCGATGCTTTAGCTAAA
ATGCCTCCAATGAAAATTGGGAAATACAATCAGTTGCAGGAATGGCAGGACGATTGGGATAACCCAAAAGACAATCACAG
ACACGTTTCGCATTTGTACGGATTGTATCCAAGTAATCAGATTTCAGCAATTAAAACACCTGAATTATTTGAAGCTGCTA
AACAATCCTTGATTTACAGAACAGACGAATCTACTGGCTGGTCAATGGGGTGGAAAGTGAATTTGTGGGCGAGATTATTA
GACGGAAATCACGCTTATAAATTGATTCAGGATCAATTGCATTTGGTAACAGCGGATCAGAGAAAAGGTGGCGGAACGTA
TCCGAATATGTTAGACGCGCATCAGCCTTTTCAAATCGATGGAAATTTTGGATGTACAGCCGGTTTTGCTGAAATGCTGA
TGCAGAGTCAGGAAGAGGCGATTCATTTATTGCCAGCTTTGCCAACTGTATGGAAAGACGGAAGTATTAAAGGTTTGGTG
GCCAGAGGCGGATTTGTAATTGATATGACTTGGAAAAACAATAAAGTTTCGGAGTTAAAAATCTATTCGAAAATTGGAGG
AAACTGTAGATTAAAAGTAGAAAATACTTTAAAAGGTTCTTCGCTTAAAAAAGCAAAAGGAAAGAATCCGAATCCCTTGT
TTTACGATGTAGAAGTAAAGAAACCAATTATTTCTAAAGAAGCAAAATTGCCTAAAGTACAATTGCCAACTTACAATATT
TACGATGTGAATATGAAAGCAGGGCAGACTTATACTTTTTCGGGGAATTAA

Upstream 100 bases:

>100_bases
CCTTTTAATCTGTGGCAAAATAAATTAGAGAAATTGAAATAAAAATTAAAAAGGAATTAGTGCCAATTCGTGAAATTCGT
GGCGAGAAAAAAATATAAGT

Downstream 100 bases:

>100_bases
TTTTTTGAACCATATAAGTTATATAAGAAAATATAATAACACGTCATATTTGTCATTTCGACGAAGGAGAAATCTCCACA
AGTAACTCCGCAAAATGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: Glycoside Hydrolase Family; Large Secreted Protein; Fibronectin Type III Domain Protein; Twin-Arginine Translocation Pathway Signal; Glycoside Hydrolase Family Protein; Six-Hairpin Glycosidase; 1 2-Alpha-L-Fucosidase; Alpha/Beta Hydrolase Domain-Containing Protein; Alpha-Fucosidase; Trehalose And Maltose Hydrolase-Like Protein; Fibronectin Type III Domain-Containing Protein; 1 2-A-L-Fucosidase; Ricin B Lectin; Coagulation Factor 5/8 Type Domain-Containing Protein; Glycosyl Hydrolase; F5/8 Type C Domain-Containing Protein; Candidate Alpha-L-Fucosidase; Glycosyl Hydrolase Family Protein

Number of amino acids: Translated: 816; Mature: 815

Protein sequence:

>816_residues
MGLKIKITAICFGIFSLTATAQSDLKLWYDKPASIWNEALPLGNGRLGAMVFGDPAVERLQLNEETIWAGSPNGNAHNKS
IKALPIVRQLIFDGKFDEAQDLATQDIMSQTNDGMPYQTFGSVYISFAGHQKYADYYRDLDISNATAKVKYKVNGVEFTR
EILTAFSDQVIVVKLSASQPGQITCNVFMNSPIDKTVASTEGNQIILSGVGTNFEGVKGKVKFQGRLTAKNKGGEIDASN
GVLSINKADEVTLYISIATNFKNYQDISGDEIAKSKDYLAKAEVKDFETIKKAHVDYYQKFFNRVSLNLGSNDLVKKPTN
ERIRDFSKQFDPQLASLYFQFGRYLLISSSQPGGQPANLQGIWNDMVTPPWDSKYTTNINAEMNYWPAQVTNLQEMHEPF
VQMAKELAVTGAETAKTMYNASGWVLHHNTDIWRVTAPVDSAASGMWPTGGAWVCQDLWERYLYTGDKKYLVEIYPIMKG
AADFFLDFMVIDPNTKYLVVVPSSSPENTHAGGTGKATIASGTTMDNQLVFDLFTHVIEASALVSPDVAYAKKVSDALAK
MPPMKIGKYNQLQEWQDDWDNPKDNHRHVSHLYGLYPSNQISAIKTPELFEAAKQSLIYRTDESTGWSMGWKVNLWARLL
DGNHAYKLIQDQLHLVTADQRKGGGTYPNMLDAHQPFQIDGNFGCTAGFAEMLMQSQEEAIHLLPALPTVWKDGSIKGLV
ARGGFVIDMTWKNNKVSELKIYSKIGGNCRLKVENTLKGSSLKKAKGKNPNPLFYDVEVKKPIISKEAKLPKVQLPTYNI
YDVNMKAGQTYTFSGN

Sequences:

>Translated_816_residues
MGLKIKITAICFGIFSLTATAQSDLKLWYDKPASIWNEALPLGNGRLGAMVFGDPAVERLQLNEETIWAGSPNGNAHNKS
IKALPIVRQLIFDGKFDEAQDLATQDIMSQTNDGMPYQTFGSVYISFAGHQKYADYYRDLDISNATAKVKYKVNGVEFTR
EILTAFSDQVIVVKLSASQPGQITCNVFMNSPIDKTVASTEGNQIILSGVGTNFEGVKGKVKFQGRLTAKNKGGEIDASN
GVLSINKADEVTLYISIATNFKNYQDISGDEIAKSKDYLAKAEVKDFETIKKAHVDYYQKFFNRVSLNLGSNDLVKKPTN
ERIRDFSKQFDPQLASLYFQFGRYLLISSSQPGGQPANLQGIWNDMVTPPWDSKYTTNINAEMNYWPAQVTNLQEMHEPF
VQMAKELAVTGAETAKTMYNASGWVLHHNTDIWRVTAPVDSAASGMWPTGGAWVCQDLWERYLYTGDKKYLVEIYPIMKG
AADFFLDFMVIDPNTKYLVVVPSSSPENTHAGGTGKATIASGTTMDNQLVFDLFTHVIEASALVSPDVAYAKKVSDALAK
MPPMKIGKYNQLQEWQDDWDNPKDNHRHVSHLYGLYPSNQISAIKTPELFEAAKQSLIYRTDESTGWSMGWKVNLWARLL
DGNHAYKLIQDQLHLVTADQRKGGGTYPNMLDAHQPFQIDGNFGCTAGFAEMLMQSQEEAIHLLPALPTVWKDGSIKGLV
ARGGFVIDMTWKNNKVSELKIYSKIGGNCRLKVENTLKGSSLKKAKGKNPNPLFYDVEVKKPIISKEAKLPKVQLPTYNI
YDVNMKAGQTYTFSGN
>Mature_815_residues
GLKIKITAICFGIFSLTATAQSDLKLWYDKPASIWNEALPLGNGRLGAMVFGDPAVERLQLNEETIWAGSPNGNAHNKSI
KALPIVRQLIFDGKFDEAQDLATQDIMSQTNDGMPYQTFGSVYISFAGHQKYADYYRDLDISNATAKVKYKVNGVEFTRE
ILTAFSDQVIVVKLSASQPGQITCNVFMNSPIDKTVASTEGNQIILSGVGTNFEGVKGKVKFQGRLTAKNKGGEIDASNG
VLSINKADEVTLYISIATNFKNYQDISGDEIAKSKDYLAKAEVKDFETIKKAHVDYYQKFFNRVSLNLGSNDLVKKPTNE
RIRDFSKQFDPQLASLYFQFGRYLLISSSQPGGQPANLQGIWNDMVTPPWDSKYTTNINAEMNYWPAQVTNLQEMHEPFV
QMAKELAVTGAETAKTMYNASGWVLHHNTDIWRVTAPVDSAASGMWPTGGAWVCQDLWERYLYTGDKKYLVEIYPIMKGA
ADFFLDFMVIDPNTKYLVVVPSSSPENTHAGGTGKATIASGTTMDNQLVFDLFTHVIEASALVSPDVAYAKKVSDALAKM
PPMKIGKYNQLQEWQDDWDNPKDNHRHVSHLYGLYPSNQISAIKTPELFEAAKQSLIYRTDESTGWSMGWKVNLWARLLD
GNHAYKLIQDQLHLVTADQRKGGGTYPNMLDAHQPFQIDGNFGCTAGFAEMLMQSQEEAIHLLPALPTVWKDGSIKGLVA
RGGFVIDMTWKNNKVSELKIYSKIGGNCRLKVENTLKGSSLKKAKGKNPNPLFYDVEVKKPIISKEAKLPKVQLPTYNIY
DVNMKAGQTYTFSGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 90827; Mature: 90696

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLKIKITAICFGIFSLTATAQSDLKLWYDKPASIWNEALPLGNGRLGAMVFGDPAVERL
CCEEEEEHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHCCCCCCCCEEEEEECCCHHHHE
QLNEETIWAGSPNGNAHNKSIKALPIVRQLIFDGKFDEAQDLATQDIMSQTNDGMPYQTF
ECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEE
GSVYISFAGHQKYADYYRDLDISNATAKVKYKVNGVEFTREILTAFSDQVIVVKLSASQP
CEEEEEECCCHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHCCCCEEEEEECCCCC
GQITCNVFMNSPIDKTVASTEGNQIILSGVGTNFEGVKGKVKFQGRLTAKNKGGEIDASN
CEEEEEEEECCCCCHHHHCCCCCEEEEEECCCCCCCCEEEEEEEEEEEECCCCCEEECCC
GVLSINKADEVTLYISIATNFKNYQDISGDEIAKSKDYLAKAEVKDFETIKKAHVDYYQK
CEEEECCCCCEEEEEEEEECCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
FFNRVSLNLGSNDLVKKPTNERIRDFSKQFDPQLASLYFQFGRYLLISSSQPGGQPANLQ
HHHHEEECCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCEEEEECCCCCCCCCCCC
GIWNDMVTPPWDSKYTTNINAEMNYWPAQVTNLQEMHEPFVQMAKELAVTGAETAKTMYN
HHHHCCCCCCCCCCEEEEECCEEEECCHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHCC
ASGWVLHHNTDIWRVTAPVDSAASGMWPTGGAWVCQDLWERYLYTGDKKYLVEIYPIMKG
CCCEEEEECCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEHHHHC
AADFFLDFMVIDPNTKYLVVVPSSSPENTHAGGTGKATIASGTTMDNQLVFDLFTHVIEA
CHHEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHH
SALVSPDVAYAKKVSDALAKMPPMKIGKYNQLQEWQDDWDNPKDNHRHVSHLYGLYPSNQ
HHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCC
ISAIKTPELFEAAKQSLIYRTDESTGWSMGWKVNLWARLLDGNHAYKLIQDQLHLVTADQ
CCCCCCHHHHHHHHHHEEEEECCCCCCCCCEEEEEEEEEECCCHHHHHHHCCEEEEEECC
RKGGGTYPNMLDAHQPFQIDGNFGCTAGFAEMLMQSQEEAIHLLPALPTVWKDGSIKGLV
CCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCEEEEE
ARGGFVIDMTWKNNKVSELKIYSKIGGNCRLKVENTLKGSSLKKAKGKNPNPLFYDVEVK
ECCCEEEEEEECCCCCCEEEEEECCCCEEEEEECCCCCCCCCHHHCCCCCCCEEEEEEEC
KPIISKEAKLPKVQLPTYNIYDVNMKAGQTYTFSGN
CCHHCCCCCCCEEECCEEEEEEEEECCCCEEEECCC
>Mature Secondary Structure 
GLKIKITAICFGIFSLTATAQSDLKLWYDKPASIWNEALPLGNGRLGAMVFGDPAVERL
CEEEEEHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHCCCCCCCCEEEEEECCCHHHHE
QLNEETIWAGSPNGNAHNKSIKALPIVRQLIFDGKFDEAQDLATQDIMSQTNDGMPYQTF
ECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEE
GSVYISFAGHQKYADYYRDLDISNATAKVKYKVNGVEFTREILTAFSDQVIVVKLSASQP
CEEEEEECCCHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHCCCCEEEEEECCCCC
GQITCNVFMNSPIDKTVASTEGNQIILSGVGTNFEGVKGKVKFQGRLTAKNKGGEIDASN
CEEEEEEEECCCCCHHHHCCCCCEEEEEECCCCCCCCEEEEEEEEEEEECCCCCEEECCC
GVLSINKADEVTLYISIATNFKNYQDISGDEIAKSKDYLAKAEVKDFETIKKAHVDYYQK
CEEEECCCCCEEEEEEEEECCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
FFNRVSLNLGSNDLVKKPTNERIRDFSKQFDPQLASLYFQFGRYLLISSSQPGGQPANLQ
HHHHEEECCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCEEEEECCCCCCCCCCCC
GIWNDMVTPPWDSKYTTNINAEMNYWPAQVTNLQEMHEPFVQMAKELAVTGAETAKTMYN
HHHHCCCCCCCCCCEEEEECCEEEECCHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHCC
ASGWVLHHNTDIWRVTAPVDSAASGMWPTGGAWVCQDLWERYLYTGDKKYLVEIYPIMKG
CCCEEEEECCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEHHHHC
AADFFLDFMVIDPNTKYLVVVPSSSPENTHAGGTGKATIASGTTMDNQLVFDLFTHVIEA
CHHEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHH
SALVSPDVAYAKKVSDALAKMPPMKIGKYNQLQEWQDDWDNPKDNHRHVSHLYGLYPSNQ
HHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCC
ISAIKTPELFEAAKQSLIYRTDESTGWSMGWKVNLWARLLDGNHAYKLIQDQLHLVTADQ
CCCCCCHHHHHHHHHHEEEEECCCCCCCCCEEEEEEEEEECCCHHHHHHHCCEEEEEECC
RKGGGTYPNMLDAHQPFQIDGNFGCTAGFAEMLMQSQEEAIHLLPALPTVWKDGSIKGLV
CCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCEEEEE
ARGGFVIDMTWKNNKVSELKIYSKIGGNCRLKVENTLKGSSLKKAKGKNPNPLFYDVEVK
ECCCEEEEEEECCCCCCEEEEEECCCCEEEEEECCCCCCCCCHHHCCCCCCCEEEEEEEC
KPIISKEAKLPKVQLPTYNIYDVNMKAGQTYTFSGN
CCHHCCCCCCCEEECCEEEEEEEEECCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA