| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301785
Identifier: 146301785
GI number: 146301785
Start: 4828848
End: 4829978
Strand: Direct
Name: 146301785
Synonym: Fjoh_4049
Alternate gene names: NA
Gene position: 4828848-4829978 (Clockwise)
Preceding gene: 146301784
Following gene: 146301786
Centisome position: 79.2
GC content: 34.66
Gene sequence:
>1131_bases ATGAAAATAGCTTTACTCTTGCCCCGATCTGTCATTTACCCTTCTATTTCTTTTGATATAATGGATGGTTTAAAATCTTC CCTAAAAAAAATGGGAATTGATGAAAAACATGAAATTGTAACAGCAAGTATAGGACTTGGAGCTGACCATAAAGAAATAT ATTCCTGCTGTGAGCAATTACTGTTTAGTAATACGGATATTGTTGTTGCGTATATTAACCCTGAAGCTGCAGAATTTATT CAGCCTCTTTTTGAAAGTTCGGGTAAATTGCTTATCGTGCTGGATAGTGGTTATCATTTTCAAAATTTTGAGAAAAAAAT ATCCAATGTTTATTTTATTTCCTTAGAAAACAGCCTTTGTTCACGTTTAATTGTACGCAAAGCCATCGAAGAAGGCCAGC AGAATTTTGCCTTTACCTGCTCATTTTATGATGCCGGTTATCGCCCGCCTTATACTTTTGCTACTGCTCTTGAAGATAAA GGAGGATCAATACATTATAATCATGTTACACCTTTAAAAAAGGCCGATTTTAATTTAGGCCCTTTAGAGGAATTTCTGGA ACAAAATGATAATATTTCTGTATTAACTTCTTTTTGCGGCGATATGGCCGAAGATTTTTTTCGTGAATCAGCAAAAATAA AAAATATAGCTTCACGCAAAACTTACGGAAGCGGCTTTACTGCTGAAGAATCCTGGCTGAATAAAATTTCATATCCTGGG TATAATTGGAGCTGCGCTGTTCCATGGTCTGCCAATTTAAAAAATAAAGAAAACGAAGAATTTGCAGCTGTGATGCGAAA TATTCGCGAACAAAAAGCGAATGTTTTTTCTCTTTTAGGATGGGAAGCTGGTTTGTTTATCAGTAGTTCAAATGGTCAGT CATTAGACAACATCACAATTGATTCTCCTAGAGGAAAAGTACATATTAATCCCAATACTGGTTTTTCTGAAGCACCTTTA TATTATGCAACTGTTGCAAAAAATGAAGAAAACGGAAACTGCATTTTAGAAAACATAACTGAAATTACTGATTTAGAAGA AGAACGCATCCGTTTATATCAACATATTCTGGCAGTTCAAAATACGCCTTCTAATTCCTGGTTAAACTCTTATGCCTGTT TAGACTCATGA
Upstream 100 bases:
>100_bases TATGCCTTCAGGGAATTTTTCCTTCAAGGAATTAACAATCTATACCCATTAGAGTTTCTAATGGGTAGTTTGTTTTTAAA AATTATCTATAAAATTATTT
Downstream 100 bases:
>100_bases ATCCGATACGCGACATAGTAATTTTATGTAATAACCGTATGGCTTTTCCAGCTATACAAACTTTACATAGTCTTGGAAGA CTGCATACAATAGCTGTACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MKIALLLPRSVIYPSISFDIMDGLKSSLKKMGIDEKHEIVTASIGLGADHKEIYSCCEQLLFSNTDIVVAYINPEAAEFI QPLFESSGKLLIVLDSGYHFQNFEKKISNVYFISLENSLCSRLIVRKAIEEGQQNFAFTCSFYDAGYRPPYTFATALEDK GGSIHYNHVTPLKKADFNLGPLEEFLEQNDNISVLTSFCGDMAEDFFRESAKIKNIASRKTYGSGFTAEESWLNKISYPG YNWSCAVPWSANLKNKENEEFAAVMRNIREQKANVFSLLGWEAGLFISSSNGQSLDNITIDSPRGKVHINPNTGFSEAPL YYATVAKNEENGNCILENITEITDLEEERIRLYQHILAVQNTPSNSWLNSYACLDS
Sequences:
>Translated_376_residues MKIALLLPRSVIYPSISFDIMDGLKSSLKKMGIDEKHEIVTASIGLGADHKEIYSCCEQLLFSNTDIVVAYINPEAAEFI QPLFESSGKLLIVLDSGYHFQNFEKKISNVYFISLENSLCSRLIVRKAIEEGQQNFAFTCSFYDAGYRPPYTFATALEDK GGSIHYNHVTPLKKADFNLGPLEEFLEQNDNISVLTSFCGDMAEDFFRESAKIKNIASRKTYGSGFTAEESWLNKISYPG YNWSCAVPWSANLKNKENEEFAAVMRNIREQKANVFSLLGWEAGLFISSSNGQSLDNITIDSPRGKVHINPNTGFSEAPL YYATVAKNEENGNCILENITEITDLEEERIRLYQHILAVQNTPSNSWLNSYACLDS >Mature_376_residues MKIALLLPRSVIYPSISFDIMDGLKSSLKKMGIDEKHEIVTASIGLGADHKEIYSCCEQLLFSNTDIVVAYINPEAAEFI QPLFESSGKLLIVLDSGYHFQNFEKKISNVYFISLENSLCSRLIVRKAIEEGQQNFAFTCSFYDAGYRPPYTFATALEDK GGSIHYNHVTPLKKADFNLGPLEEFLEQNDNISVLTSFCGDMAEDFFRESAKIKNIASRKTYGSGFTAEESWLNKISYPG YNWSCAVPWSANLKNKENEEFAAVMRNIREQKANVFSLLGWEAGLFISSSNGQSLDNITIDSPRGKVHINPNTGFSEAPL YYATVAKNEENGNCILENITEITDLEEERIRLYQHILAVQNTPSNSWLNSYACLDS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42251; Mature: 42251
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIALLLPRSVIYPSISFDIMDGLKSSLKKMGIDEKHEIVTASIGLGADHKEIYSCCEQL CEEEEECCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHH LFSNTDIVVAYINPEAAEFIQPLFESSGKLLIVLDSGYHFQNFEKKISNVYFISLENSLC HHCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCEEEEEECHHHH SRLIVRKAIEEGQQNFAFTCSFYDAGYRPPYTFATALEDKGGSIHYNHVTPLKKADFNLG HHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCEEEHCCCCCCEEEECCCCCHHHCCCCCC PLEEFLEQNDNISVLTSFCGDMAEDFFRESAKIKNIASRKTYGSGFTAEESWLNKISYPG HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCC YNWSCAVPWSANLKNKENEEFAAVMRNIREQKANVFSLLGWEAGLFISSSNGQSLDNITI CCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEE DSPRGKVHINPNTGFSEAPLYYATVAKNEENGNCILENITEITDLEEERIRLYQHILAVQ ECCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHC NTPSNSWLNSYACLDS CCCCCCHHHCCCCCCC >Mature Secondary Structure MKIALLLPRSVIYPSISFDIMDGLKSSLKKMGIDEKHEIVTASIGLGADHKEIYSCCEQL CEEEEECCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHH LFSNTDIVVAYINPEAAEFIQPLFESSGKLLIVLDSGYHFQNFEKKISNVYFISLENSLC HHCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCEEEEEECHHHH SRLIVRKAIEEGQQNFAFTCSFYDAGYRPPYTFATALEDKGGSIHYNHVTPLKKADFNLG HHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCEEEHCCCCCCEEEECCCCCHHHCCCCCC PLEEFLEQNDNISVLTSFCGDMAEDFFRESAKIKNIASRKTYGSGFTAEESWLNKISYPG HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCC YNWSCAVPWSANLKNKENEEFAAVMRNIREQKANVFSLLGWEAGLFISSSNGQSLDNITI CCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEE DSPRGKVHINPNTGFSEAPLYYATVAKNEENGNCILENITEITDLEEERIRLYQHILAVQ ECCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHC NTPSNSWLNSYACLDS CCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA