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The map label for this gene is 146301784

Identifier: 146301784

GI number: 146301784

Start: 4828243

End: 4828782

Strand: Direct

Name: 146301784

Synonym: Fjoh_4048

Alternate gene names: NA

Gene position: 4828243-4828782 (Clockwise)

Preceding gene: 146301783

Following gene: 146301785

Centisome position: 79.19

GC content: 40.56

Gene sequence:

>540_bases
ATGGAAGGAACAATATCCGAAATTCGATTATATGCACCTAACTTTGCTCCAAAATATTGGGCTTACTGTGCGGGTCAACT
ACTAAGTATAAATACAAACCAAGCCTTATTTAGTCTTTTAGGCACTACATACGGCGGTAATGGTACTACTAATTTTGCAT
TACCTGATTTTAGGGGAAGAACTGCCGTTGGAACTGGTACTCCTCAAGGAGTAGCTCAATTTGTATTGGGACAGGTAAGC
GGAACTAATACAGTAACTGCACTGCTTGGAAATCTTCCGGCACACACTCATGCAGCCACAGGAACATTTGCACTAAAAGC
ATATGCTGATACAGGAGATACTGCCGCACCGCAAAATGCTTATCTGGCTTCGGTTTCAAATCTTTACACCAGCCAAAACG
CAGATGGTGCTTTAAAACCAATTACACCAACAGTAACTGTAGGAACAACTGGAAGCAGCCAGCCAATTTCAATTCAGCAG
CCTTATTTAGGTATTAATTATATAATATGCCTTCAGGGAATTTTTCCTTCAAGGAATTAA

Upstream 100 bases:

>100_bases
GCAAGTCAGCCTTTCGATATCATTCAGCCTTCACTATCTACTAATTATATTATTTGTGTAGAAGGAATTTTCCCAACTAG
AAACTAAACCAAAACTAACC

Downstream 100 bases:

>100_bases
CAATCTATACCCATTAGAGTTTCTAATGGGTAGTTTGTTTTTAAAAATTATCTATAAAATTATTTATGAAAATAGCTTTA
CTCTTGCCCCGATCTGTCAT

Product: phage tail collar domain-containing protein

Products: NA

Alternate protein names: Phage Tail Collar; Tail Collar Domain-Containing Protein; Phage Tail Collar Domain-Containing Protein; Microcystin Dependent Protein; Microcystin-Dependent Protein; Phage Tail Collar Domain Protein; Microcystin Dependent Protein MdpB; Phage Tail Collar Domain Family; Microcystin Dependent; Phenylacrylic Acid Decarboxylase

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MEGTISEIRLYAPNFAPKYWAYCAGQLLSINTNQALFSLLGTTYGGNGTTNFALPDFRGRTAVGTGTPQGVAQFVLGQVS
GTNTVTALLGNLPAHTHAATGTFALKAYADTGDTAAPQNAYLASVSNLYTSQNADGALKPITPTVTVGTTGSSQPISIQQ
PYLGINYIICLQGIFPSRN

Sequences:

>Translated_179_residues
MEGTISEIRLYAPNFAPKYWAYCAGQLLSINTNQALFSLLGTTYGGNGTTNFALPDFRGRTAVGTGTPQGVAQFVLGQVS
GTNTVTALLGNLPAHTHAATGTFALKAYADTGDTAAPQNAYLASVSNLYTSQNADGALKPITPTVTVGTTGSSQPISIQQ
PYLGINYIICLQGIFPSRN
>Mature_179_residues
MEGTISEIRLYAPNFAPKYWAYCAGQLLSINTNQALFSLLGTTYGGNGTTNFALPDFRGRTAVGTGTPQGVAQFVLGQVS
GTNTVTALLGNLPAHTHAATGTFALKAYADTGDTAAPQNAYLASVSNLYTSQNADGALKPITPTVTVGTTGSSQPISIQQ
PYLGINYIICLQGIFPSRN

Specific function: Unknown

COG id: COG4675

COG function: function code S; Microcystin-dependent protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18655; Mature: 18655

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGTISEIRLYAPNFAPKYWAYCAGQLLSINTNQALFSLLGTTYGGNGTTNFALPDFRGR
CCCCCCCEEEECCCCCHHHHHHHCCEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
TAVGTGTPQGVAQFVLGQVSGTNTVTALLGNLPAHTHAATGTFALKAYADTGDTAAPQNA
EEECCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCH
YLASVSNLYTSQNADGALKPITPTVTVGTTGSSQPISIQQPYLGINYIICLQGIFPSRN
HHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCEEEEEEECCCCCCC
>Mature Secondary Structure
MEGTISEIRLYAPNFAPKYWAYCAGQLLSINTNQALFSLLGTTYGGNGTTNFALPDFRGR
CCCCCCCEEEECCCCCHHHHHHHCCEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
TAVGTGTPQGVAQFVLGQVSGTNTVTALLGNLPAHTHAATGTFALKAYADTGDTAAPQNA
EEECCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCH
YLASVSNLYTSQNADGALKPITPTVTVGTTGSSQPISIQQPYLGINYIICLQGIFPSRN
HHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA