| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is 146301757
Identifier: 146301757
GI number: 146301757
Start: 4800292
End: 4800876
Strand: Direct
Name: 146301757
Synonym: Fjoh_4019
Alternate gene names: NA
Gene position: 4800292-4800876 (Clockwise)
Preceding gene: 146301756
Following gene: 146301758
Centisome position: 78.73
GC content: 23.42
Gene sequence:
>585_bases ATGAAAAAAATAATTTTGTTAGCCTTTACAATTTGCACTATAAATTCCTGCAAAAAAAAAGAATACATTACCATTAAACA AATTGTTTCAGATCAAATAGTTACTATTACTCCAAATCTAAAAAAAATAGATGCAAAAGATAGTGTCTCAATTAATATTC CAGCAGAGTTTGAAATTGAAACATATGACTCTTCTTTAGAATCCATTAATTTATATTACGTAATTAATCAAAAGAATTTA ATGCAAATTTCAGAATTTGAAATGTTTATTAGTAATAATAAGCCAATAAATAATTTAAAGTTTTATTTATCAGTAGAAAA ACCACTTAGAATTATTCTTAGAGAAAAGAATCATTTAATATCAAAGAATTATGCTCGAGAATTATTAAAACGGTATAATA TAAATAAATCATTAGAAGATTTTAAATTAGGTGACACAATAAAATTAGTTTCTTACAATCAATTTCGAAAAGAAAACTCT TTCATTTTAAACGACTTGAGAAAAGTGGGGGATACTGTAATTATTACAACGAGAAAAAAGGGCGAGGAAATTTATAAACC AACAAAAATTAAAATCAATTGGTAA
Upstream 100 bases:
>100_bases CTCCCTCTTACATAATTTTTTATTACAAACAAAAACAAAAAGATTGAGATGAAGAAGCAACAATAATTGAATGCATATTT ATTAACTTATAAATAATAAA
Downstream 100 bases:
>100_bases AAAGCTATGTAAAATTTACCGCCCTACTAAACAGAATTAACAACAACAATTAAGCAAAATAAATTAGACTAAAAAATATG AAATTTATAGTTGCCTTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MKKIILLAFTICTINSCKKKEYITIKQIVSDQIVTITPNLKKIDAKDSVSINIPAEFEIETYDSSLESINLYYVINQKNL MQISEFEMFISNNKPINNLKFYLSVEKPLRIILREKNHLISKNYARELLKRYNINKSLEDFKLGDTIKLVSYNQFRKENS FILNDLRKVGDTVIITTRKKGEEIYKPTKIKINW
Sequences:
>Translated_194_residues MKKIILLAFTICTINSCKKKEYITIKQIVSDQIVTITPNLKKIDAKDSVSINIPAEFEIETYDSSLESINLYYVINQKNL MQISEFEMFISNNKPINNLKFYLSVEKPLRIILREKNHLISKNYARELLKRYNINKSLEDFKLGDTIKLVSYNQFRKENS FILNDLRKVGDTVIITTRKKGEEIYKPTKIKINW >Mature_194_residues MKKIILLAFTICTINSCKKKEYITIKQIVSDQIVTITPNLKKIDAKDSVSINIPAEFEIETYDSSLESINLYYVINQKNL MQISEFEMFISNNKPINNLKFYLSVEKPLRIILREKNHLISKNYARELLKRYNINKSLEDFKLGDTIKLVSYNQFRKENS FILNDLRKVGDTVIITTRKKGEEIYKPTKIKINW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22820; Mature: 22820
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIILLAFTICTINSCKKKEYITIKQIVSDQIVTITPNLKKIDAKDSVSINIPAEFEIE CCEEEEEEEEEHHCCCCCCCCEEEHHHHHCCCEEEECCCCEEECCCCCEEEECCCEEEEE TYDSSLESINLYYVINQKNLMQISEFEMFISNNKPINNLKFYLSVEKPLRIILREKNHLI ECCCCCCEEEEEEEECCCCCEEHEEEEEEECCCCCCCCEEEEEEECCCCEEEHHCCCCHH SKNYARELLKRYNINKSLEDFKLGDTIKLVSYNQFRKENSFILNDLRKVGDTVIITTRKK HHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECHHHHCCCHHHHHHHHHCCCEEEEEECCC GEEIYKPTKIKINW CCCCCCCEEEEEEC >Mature Secondary Structure MKKIILLAFTICTINSCKKKEYITIKQIVSDQIVTITPNLKKIDAKDSVSINIPAEFEIE CCEEEEEEEEEHHCCCCCCCCEEEHHHHHCCCEEEECCCCEEECCCCCEEEECCCEEEEE TYDSSLESINLYYVINQKNLMQISEFEMFISNNKPINNLKFYLSVEKPLRIILREKNHLI ECCCCCCEEEEEEEECCCCCEEHEEEEEEECCCCCCCCEEEEEEECCCCEEEHHCCCCHH SKNYARELLKRYNINKSLEDFKLGDTIKLVSYNQFRKENSFILNDLRKVGDTVIITTRKK HHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECHHHHCCCHHHHHHHHHCCCEEEEEECCC GEEIYKPTKIKINW CCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA