| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301758
Identifier: 146301758
GI number: 146301758
Start: 4800954
End: 4801325
Strand: Direct
Name: 146301758
Synonym: Fjoh_4020
Alternate gene names: NA
Gene position: 4800954-4801325 (Clockwise)
Preceding gene: 146301757
Following gene: 146301759
Centisome position: 78.74
GC content: 27.42
Gene sequence:
>372_bases ATGAAATTTATAGTTGCCTTTGTGCTTTTAACACAACAGTTCGTTTTCTCTCAAGAAAAAAATATTGAATATTTACCTTT AAATAAAGAGAATTTTCAGGTTAAACCTAATTCAGTAACTTTTAAATTTTCTGTTGTAGCCACTAAATATAAAAACCGCT ATGATCTTGCCCGAGACACAATATTAAAAGAAGGGAATTATATAATTAAATACGATGATTTTTTTACAAAATTTTCAGTA AATAAGGCTGGCAAAATTGACGGAAAACTTGATGAAAAGTTTATAAAGCGTGGTGAAATATTTACAACTAAATACCTCGT TAGAGATGGATTTATATATAAAGCTACTATGTACGATTCAACTGTAATCTAA
Upstream 100 bases:
>100_bases CAAAAATTAAAATCAATTGGTAAAAAGCTATGTAAAATTTACCGCCCTACTAAACAGAATTAACAACAACAATTAAGCAA AATAAATTAGACTAAAAAAT
Downstream 100 bases:
>100_bases TTACCGATAGTGATGTTTATTATTGTGGAAACACTATTGAAGTAGTATTGATTACAGCAAATGGTGAAAAAAAAATAACA ATTGAAACTCCTGCTAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MKFIVAFVLLTQQFVFSQEKNIEYLPLNKENFQVKPNSVTFKFSVVATKYKNRYDLARDTILKEGNYIIKYDDFFTKFSV NKAGKIDGKLDEKFIKRGEIFTTKYLVRDGFIYKATMYDSTVI
Sequences:
>Translated_123_residues MKFIVAFVLLTQQFVFSQEKNIEYLPLNKENFQVKPNSVTFKFSVVATKYKNRYDLARDTILKEGNYIIKYDDFFTKFSV NKAGKIDGKLDEKFIKRGEIFTTKYLVRDGFIYKATMYDSTVI >Mature_123_residues MKFIVAFVLLTQQFVFSQEKNIEYLPLNKENFQVKPNSVTFKFSVVATKYKNRYDLARDTILKEGNYIIKYDDFFTKFSV NKAGKIDGKLDEKFIKRGEIFTTKYLVRDGFIYKATMYDSTVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14518; Mature: 14518
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFIVAFVLLTQQFVFSQEKNIEYLPLNKENFQVKPNSVTFKFSVVATKYKNRYDLARDT CHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEECCCCEEEEEEEEEECCCCCHHHHHHH ILKEGNYIIKYDDFFTKFSVNKAGKIDGKLDEKFIKRGEIFTTKYLVRDGFIYKATMYDS HHHCCCEEEEECCCEEEEECCCCCCCCCCHHHHHHHCCCEEEEEEEECCCEEEEEEECCC TVI CCC >Mature Secondary Structure MKFIVAFVLLTQQFVFSQEKNIEYLPLNKENFQVKPNSVTFKFSVVATKYKNRYDLARDT CHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEECCCCEEEEEEEEEECCCCCHHHHHHH ILKEGNYIIKYDDFFTKFSVNKAGKIDGKLDEKFIKRGEIFTTKYLVRDGFIYKATMYDS HHHCCCEEEEECCCEEEEECCCCCCCCCCHHHHHHHCCCEEEEEEEECCCEEEEEEECCC TVI CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA