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The map label for this gene is yiaD [C]

Identifier: 146301688

GI number: 146301688

Start: 4711256

End: 4713217

Strand: Reverse

Name: yiaD [C]

Synonym: Fjoh_3950

Alternate gene names: 146301688

Gene position: 4713217-4711256 (Counterclockwise)

Preceding gene: 146301689

Following gene: 146301687

Centisome position: 77.31

GC content: 34.4

Gene sequence:

>1962_bases
ATGAAAATGAAAAAAATAGTATATACACTTTTTTTATCCTTCTTTTTCTTTAACGCAATAGCACAAAAAGCAGTTTTAGC
TAAAGCCGAAAAAGAATACAATGATTTCGCTTACGCGGATGCCATTGCCATTTACGAAAAGCTTGCAGCCAAAGGTTATG
AAGATGAAAAAATGTTCCAGAGATTAGGAAACGCTTATTATTTTAATGCCGAACTGCCAAAAGCCGCCGCTTGGTACGAT
AAGCTTTTTGCCTTAAATGCACAGCAGGAACCAGAATATTTATACCGTTATTCACAATCTCTAAAATCAATTGGAGATTA
TGCAAAAGCAGATAAAATGCTGGACGCCTTCAATAAAAAAACAAATACAGACAGCCGAGGGATTTTGTTCGAAAACAACA
AAAATTACTTAGAGCAGATTAAATTAAATTCTGGCCGATTTGATATTTCGAGTGCAAATGTAAACTCAGAAAGTTCAGAT
TTTGGAAGCGCTTTTTATAACAACAATTTAGTTTTCAGTTCAGCCAGAAAAATTGGTAAAGCAGAGGGAAAAACTTTTAA
ATGGACCAATAAATCTTTTACCAATTTATACATTGCTCCTATAAAAGCAGATGGAAATGTTTACAATCCGGTTCTTTTAA
ACAAAGAAATTAATTCTAAGTTCAACGAATCGACTCCGGTATTTACAAAAGATGGTAAAACAATGTATTTTACCCGAAAC
AACTATTTAGACGGAAAACGCGGTAAAAATGATAAAAATATCACTTTACTAAAATTATATAAAGCCACTCTTGTAGACGG
AAATTGGTCAAACATAACGGAACTTCCTTTTAACAGCGACCGTTACAGTACAGCACATCCTGCTTTAAGTTTAGACGAAA
AGAAATTATATTTCGCTTCAGATATGCCGGGAACTCTTGGACAGTCAGATTTGTACAGCGTTACTATTAATGCAGACGGA
ACATTCGGGAAACCACAAAATTTAGGCCCCTCAATTAATACGGAAGGAAGAGAAACTTTCCCTTTTATTTCTGGAGACAA
CGAATTGTATTTTGCAACCGACGGACGTCCGGGACTTGGCGGACTTGATATCGTAGTTTCTAAAATTTTAGAAAACGGAA
CATTCGATCAAGTACAAAATATTGGTGAACCAATAAACACAAAATTTGATGATTTCGCTTTTATCATAGACAGTCAGACA
CGCAAAGGATATTTTTCTTCAAATAAAAAAGGCGGTGTTGGCAACGATGATATTTACAAATTTACAGAAACCAAAAAACT
GGTTTGCGAAAGAACTTTAACCGGAACTATTTTCGACAGCAGAGCCAGCGAAAAAATAGAAGGAGCAAAAGTTATTTTGT
TTGATGAAAACCATCAGCAGATTGAAGAAGTAACCACAGCACAAGACGGATCGTATTCTTTTAAAGTAAACTGTAACAAG
AAATATTTTGTTAGAGTTGAAAGAAAACAATATCCGGCAAAAGAAAGCAGTTTTGCGGTTACAACTAGTATCGATAACAA
GTTAGATTTTACTTTAGAAAAAGAAAAAATCGCAGCTATCGAAATTCCGGAAATAAAAGCCATCAAAATTGGAACAGATT
TAGGTAAAACCCTAAACATCTCGATGATTTATTTTGATCTTGGAAAATGGAATATTACAGATGCAGCTGCAGTTGAATTA
GGAAAGATTTTAGCAGTAATGCAGGAATATCCAAAAATGAGAATCGATATACGTTCGCATACAGACAGCAGATCATCGGC
AAAATCAAATTTGGTTTTATCAGATAAAAGAGCAAAATCTATTATGGCGTGGCTGGTAAGCAAAGGAATCGATGCCAAAC
GTTTGAGAGGAAAAGGATATGGAGAAAGCCAATTGCTAAACAGATGTAAGGACGGCGTTAAATGTTCTGAAGAAGAACAT
TTAAAAAACAGAAGAAGCGAATTTATGATTATTTCTATATAA

Upstream 100 bases:

>100_bases
CCAAGTTAAACAATTACAATTCCGGCTCGCATGAAATCTTCCTGCGTTTTGAATTTATGAAAGGTTATAATCGAATTACA
TCACCAAGATTTTTCTAATT

Downstream 100 bases:

>100_bases
CAAAGTTCATTTTTTAAATTTTTAGTTTTAATTAAAAACCGGCAGTTTATACTGTCGGTTTTTTTATTTAATACACAAAT
GAATCATATTTTATGTAAAT

Product: OmpA/MotB domain-containing protein

Products: NA

Alternate protein names: Ompa/Motb Domain Protein; OmpA Family Protein; Outer Membrane Protein; OmpA/MotB Domain-Containing Protein; OmpA Family Outer Membrane Protein; OmpA/MotB Family Outer Membrane Protein; Wd40-Like Beta Propeller Containing Protein; WD40 Domain-Containing Protein Beta Propeller; WD40 Domain-Containing Protein; Outer Membrane Protein OmpA Family Protein; WD40 Domain Protein Beta Propeller; OmpA-Family Protein; Beta Propeller Repeat-Containing Protein; WD-40-Like Beta Propeller Repeat-Containing Protein; Outer Membrane Protein OmpA; Peptidoglycan-Associated Lipoprotein; Outer Membrane Protein A; Outer Membrane Protein Porin F; Outer Membrane A; Peptidoglycan-Associated Outer Membrane Protein; OmpA Family Peptidoglycan-Associated Lipoprotein

Number of amino acids: Translated: 653; Mature: 653

Protein sequence:

>653_residues
MKMKKIVYTLFLSFFFFNAIAQKAVLAKAEKEYNDFAYADAIAIYEKLAAKGYEDEKMFQRLGNAYYFNAELPKAAAWYD
KLFALNAQQEPEYLYRYSQSLKSIGDYAKADKMLDAFNKKTNTDSRGILFENNKNYLEQIKLNSGRFDISSANVNSESSD
FGSAFYNNNLVFSSARKIGKAEGKTFKWTNKSFTNLYIAPIKADGNVYNPVLLNKEINSKFNESTPVFTKDGKTMYFTRN
NYLDGKRGKNDKNITLLKLYKATLVDGNWSNITELPFNSDRYSTAHPALSLDEKKLYFASDMPGTLGQSDLYSVTINADG
TFGKPQNLGPSINTEGRETFPFISGDNELYFATDGRPGLGGLDIVVSKILENGTFDQVQNIGEPINTKFDDFAFIIDSQT
RKGYFSSNKKGGVGNDDIYKFTETKKLVCERTLTGTIFDSRASEKIEGAKVILFDENHQQIEEVTTAQDGSYSFKVNCNK
KYFVRVERKQYPAKESSFAVTTSIDNKLDFTLEKEKIAAIEIPEIKAIKIGTDLGKTLNISMIYFDLGKWNITDAAAVEL
GKILAVMQEYPKMRIDIRSHTDSRSSAKSNLVLSDKRAKSIMAWLVSKGIDAKRLRGKGYGESQLLNRCKDGVKCSEEEH
LKNRRSEFMIISI

Sequences:

>Translated_653_residues
MKMKKIVYTLFLSFFFFNAIAQKAVLAKAEKEYNDFAYADAIAIYEKLAAKGYEDEKMFQRLGNAYYFNAELPKAAAWYD
KLFALNAQQEPEYLYRYSQSLKSIGDYAKADKMLDAFNKKTNTDSRGILFENNKNYLEQIKLNSGRFDISSANVNSESSD
FGSAFYNNNLVFSSARKIGKAEGKTFKWTNKSFTNLYIAPIKADGNVYNPVLLNKEINSKFNESTPVFTKDGKTMYFTRN
NYLDGKRGKNDKNITLLKLYKATLVDGNWSNITELPFNSDRYSTAHPALSLDEKKLYFASDMPGTLGQSDLYSVTINADG
TFGKPQNLGPSINTEGRETFPFISGDNELYFATDGRPGLGGLDIVVSKILENGTFDQVQNIGEPINTKFDDFAFIIDSQT
RKGYFSSNKKGGVGNDDIYKFTETKKLVCERTLTGTIFDSRASEKIEGAKVILFDENHQQIEEVTTAQDGSYSFKVNCNK
KYFVRVERKQYPAKESSFAVTTSIDNKLDFTLEKEKIAAIEIPEIKAIKIGTDLGKTLNISMIYFDLGKWNITDAAAVEL
GKILAVMQEYPKMRIDIRSHTDSRSSAKSNLVLSDKRAKSIMAWLVSKGIDAKRLRGKGYGESQLLNRCKDGVKCSEEEH
LKNRRSEFMIISI
>Mature_653_residues
MKMKKIVYTLFLSFFFFNAIAQKAVLAKAEKEYNDFAYADAIAIYEKLAAKGYEDEKMFQRLGNAYYFNAELPKAAAWYD
KLFALNAQQEPEYLYRYSQSLKSIGDYAKADKMLDAFNKKTNTDSRGILFENNKNYLEQIKLNSGRFDISSANVNSESSD
FGSAFYNNNLVFSSARKIGKAEGKTFKWTNKSFTNLYIAPIKADGNVYNPVLLNKEINSKFNESTPVFTKDGKTMYFTRN
NYLDGKRGKNDKNITLLKLYKATLVDGNWSNITELPFNSDRYSTAHPALSLDEKKLYFASDMPGTLGQSDLYSVTINADG
TFGKPQNLGPSINTEGRETFPFISGDNELYFATDGRPGLGGLDIVVSKILENGTFDQVQNIGEPINTKFDDFAFIIDSQT
RKGYFSSNKKGGVGNDDIYKFTETKKLVCERTLTGTIFDSRASEKIEGAKVILFDENHQQIEEVTTAQDGSYSFKVNCNK
KYFVRVERKQYPAKESSFAVTTSIDNKLDFTLEKEKIAAIEIPEIKAIKIGTDLGKTLNISMIYFDLGKWNITDAAAVEL
GKILAVMQEYPKMRIDIRSHTDSRSSAKSNLVLSDKRAKSIMAWLVSKGIDAKRLRGKGYGESQLLNRCKDGVKCSEEEH
LKNRRSEFMIISI

Specific function: Unknown

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73728; Mature: 73728

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMKKIVYTLFLSFFFFNAIAQKAVLAKAEKEYNDFAYADAIAIYEKLAAKGYEDEKMFQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHH
RLGNAYYFNAELPKAAAWYDKLFALNAQQEPEYLYRYSQSLKSIGDYAKADKMLDAFNKK
HHCCEEEEECCCCCHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TNTDSRGILFENNKNYLEQIKLNSGRFDISSANVNSESSDFGSAFYNNNLVFSSARKIGK
CCCCCCCEEEECCCCEEHHEEECCCEEEEECCCCCCCCCCCCHHHHCCCEEEHHHHHHHC
AEGKTFKWTNKSFTNLYIAPIKADGNVYNPVLLNKEINSKFNESTPVFTKDGKTMYFTRN
CCCCEEEECCCCCCEEEEEEEECCCCEECCEEECCHHCCCCCCCCCEEECCCCEEEEEEC
NYLDGKRGKNDKNITLLKLYKATLVDGNWSNITELPFNSDRYSTAHPALSLDEKKLYFAS
CCCCCCCCCCCCCEEEEEEEEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEC
DMPGTLGQSDLYSVTINADGTFGKPQNLGPSINTEGRETFPFISGDNELYFATDGRPGLG
CCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEECCEEECCCEEEEEECCCCCCC
GLDIVVSKILENGTFDQVQNIGEPINTKFDDFAFIIDSQTRKGYFSSNKKGGVGNDDIYK
HHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEE
FTETKKLVCERTLTGTIFDSRASEKIEGAKVILFDENHQQIEEVTTAQDGSYSFKVNCNK
EHHHHHHHHHHHHCCEEECCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCEEEEEECCC
KYFVRVERKQYPAKESSFAVTTSIDNKLDFTLEKEKIAAIEIPEIKAIKIGTDLGKTLNI
EEEEEEEHHCCCCCCCCEEEEEECCCCEEEEEECCCEEEEECCCEEEEEECCCCCCEEEE
SMIYFDLGKWNITDAAAVELGKILAVMQEYPKMRIDIRSHTDSRSSAKSNLVLSDKRAKS
EEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEECHHHHH
IMAWLVSKGIDAKRLRGKGYGESQLLNRCKDGVKCSEEEHLKNRRSEFMIISI
HHHHHHHCCCCHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEEC
>Mature Secondary Structure
MKMKKIVYTLFLSFFFFNAIAQKAVLAKAEKEYNDFAYADAIAIYEKLAAKGYEDEKMFQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHH
RLGNAYYFNAELPKAAAWYDKLFALNAQQEPEYLYRYSQSLKSIGDYAKADKMLDAFNKK
HHCCEEEEECCCCCHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TNTDSRGILFENNKNYLEQIKLNSGRFDISSANVNSESSDFGSAFYNNNLVFSSARKIGK
CCCCCCCEEEECCCCEEHHEEECCCEEEEECCCCCCCCCCCCHHHHCCCEEEHHHHHHHC
AEGKTFKWTNKSFTNLYIAPIKADGNVYNPVLLNKEINSKFNESTPVFTKDGKTMYFTRN
CCCCEEEECCCCCCEEEEEEEECCCCEECCEEECCHHCCCCCCCCCEEECCCCEEEEEEC
NYLDGKRGKNDKNITLLKLYKATLVDGNWSNITELPFNSDRYSTAHPALSLDEKKLYFAS
CCCCCCCCCCCCCEEEEEEEEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEC
DMPGTLGQSDLYSVTINADGTFGKPQNLGPSINTEGRETFPFISGDNELYFATDGRPGLG
CCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEECCEEECCCEEEEEECCCCCCC
GLDIVVSKILENGTFDQVQNIGEPINTKFDDFAFIIDSQTRKGYFSSNKKGGVGNDDIYK
HHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEE
FTETKKLVCERTLTGTIFDSRASEKIEGAKVILFDENHQQIEEVTTAQDGSYSFKVNCNK
EHHHHHHHHHHHHCCEEECCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCEEEEEECCC
KYFVRVERKQYPAKESSFAVTTSIDNKLDFTLEKEKIAAIEIPEIKAIKIGTDLGKTLNI
EEEEEEEHHCCCCCCCCEEEEEECCCCEEEEEECCCEEEEECCCEEEEEECCCCCCEEEE
SMIYFDLGKWNITDAAAVELGKILAVMQEYPKMRIDIRSHTDSRSSAKSNLVLSDKRAKS
EEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEECHHHHH
IMAWLVSKGIDAKRLRGKGYGESQLLNRCKDGVKCSEEEHLKNRRSEFMIISI
HHHHHHHCCCCHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA