| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301689
Identifier: 146301689
GI number: 146301689
Start: 4713220
End: 4714131
Strand: Reverse
Name: 146301689
Synonym: Fjoh_3951
Alternate gene names: NA
Gene position: 4714131-4713220 (Counterclockwise)
Preceding gene: 146301690
Following gene: 146301688
Centisome position: 77.32
GC content: 37.06
Gene sequence:
>912_bases ATGAAAAAAATAGCTTTAGTTTTATTGTTTTGTTCTGCCGTAGGATTCGCACAGCAGGATGCTCAGTATACACAATATAT GCATAATACCATAAACATAAATCCTGCTTACGCTGGTTCAAGGGGAGTTATGAGTATTTTTGGGTTATATCGTACACAAT GGGTTGGACTTGACGGAGCGCCCGAAACGAGTACTTTATCATTAAATACACCTATAAACAGTAGTAATGTAGGATTAGGA TTTTCATTGGTAAATGATAAAATCGGACCGACAACCGAGAACAATTTTTCGGTAGATTTCTCTTATTCTATTCAAACATC TGCAACAGCAAAACTTTCATTTGGTATCAAAGGATCTGCAAATATTTTCAACCTTGATCCAAACAAGTTAACGCCGGAAC ACCAGGGAGACCCGCAGTTTTCTGACTTTAAAAATAAGTTTTCACCAAACGTAGGGGCAGGGGTTTACTGGCATTCAGAT AAAGGATATATTGGTTTATCTGTACCAAATTTCATCCAGACCAATCGATATGATGATAACGATGTGGCCATTTTTAAAGA ACAAATCAATTACTATTTAATTGCAGGTTACGTATTCAATTTAGATCGTTACGAAACCATCAAATTCAAACCTGCAATTT TAGGGAAAATGGTCGAAGGTTCGCCGCTTCAGTTAGATGCTTCGGCAAACTTTATGTTCAACGACAAATTTGTTGTGGGA GTTTCATACCGTTGGAGCGCTGCTTTAAGTGCACTGGCAGGATTTCAAATCAACAAAAGCATGTACATTGGTTATGCTTA CGACCGCGAAACAACCAAGTTAAACAATTACAATTCCGGCTCGCATGAAATCTTCCTGCGTTTTGAATTTATGAAAGGTT ATAATCGAATTACATCACCAAGATTTTTCTAA
Upstream 100 bases:
>100_bases CCTAAACAGGAGGCAGGATATTTATATCTAATTAAATAATAGTCCAAATCAATAAAATGGCTTAGCCATTAGGTTAAGCC ATTATCTTAAAAATAAGTAA
Downstream 100 bases:
>100_bases TTATGAAAATGAAAAAAATAGTATATACACTTTTTTTATCCTTCTTTTTCTTTAACGCAATAGCACAAAAAGCAGTTTTA GCTAAAGCCGAAAAAGAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MKKIALVLLFCSAVGFAQQDAQYTQYMHNTININPAYAGSRGVMSIFGLYRTQWVGLDGAPETSTLSLNTPINSSNVGLG FSLVNDKIGPTTENNFSVDFSYSIQTSATAKLSFGIKGSANIFNLDPNKLTPEHQGDPQFSDFKNKFSPNVGAGVYWHSD KGYIGLSVPNFIQTNRYDDNDVAIFKEQINYYLIAGYVFNLDRYETIKFKPAILGKMVEGSPLQLDASANFMFNDKFVVG VSYRWSAALSALAGFQINKSMYIGYAYDRETTKLNNYNSGSHEIFLRFEFMKGYNRITSPRFF
Sequences:
>Translated_303_residues MKKIALVLLFCSAVGFAQQDAQYTQYMHNTININPAYAGSRGVMSIFGLYRTQWVGLDGAPETSTLSLNTPINSSNVGLG FSLVNDKIGPTTENNFSVDFSYSIQTSATAKLSFGIKGSANIFNLDPNKLTPEHQGDPQFSDFKNKFSPNVGAGVYWHSD KGYIGLSVPNFIQTNRYDDNDVAIFKEQINYYLIAGYVFNLDRYETIKFKPAILGKMVEGSPLQLDASANFMFNDKFVVG VSYRWSAALSALAGFQINKSMYIGYAYDRETTKLNNYNSGSHEIFLRFEFMKGYNRITSPRFF >Mature_303_residues MKKIALVLLFCSAVGFAQQDAQYTQYMHNTININPAYAGSRGVMSIFGLYRTQWVGLDGAPETSTLSLNTPINSSNVGLG FSLVNDKIGPTTENNFSVDFSYSIQTSATAKLSFGIKGSANIFNLDPNKLTPEHQGDPQFSDFKNKFSPNVGAGVYWHSD KGYIGLSVPNFIQTNRYDDNDVAIFKEQINYYLIAGYVFNLDRYETIKFKPAILGKMVEGSPLQLDASANFMFNDKFVVG VSYRWSAALSALAGFQINKSMYIGYAYDRETTKLNNYNSGSHEIFLRFEFMKGYNRITSPRFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33929; Mature: 33929
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIALVLLFCSAVGFAQQDAQYTQYMHNTININPAYAGSRGVMSIFGLYRTQWVGLDGA CCHHEEEHHHHHHCCCCHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHEEECCCCC PETSTLSLNTPINSSNVGLGFSLVNDKIGPTTENNFSVDFSYSIQTSATAKLSFGIKGSA CCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEECCCEEEEEECCCCCC NIFNLDPNKLTPEHQGDPQFSDFKNKFSPNVGAGVYWHSDKGYIGLSVPNFIQTNRYDDN EEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCEEEEECCCHHHCCCCCCC DVAIFKEQINYYLIAGYVFNLDRYETIKFKPAILGKMVEGSPLQLDASANFMFNDKFVVG CEEEEEECCCEEEEEEEEEECCCEEEEEECHHHHHHCCCCCCEEEECCCCEEECCEEEEE VSYRWSAALSALAGFQINKSMYIGYAYDRETTKLNNYNSGSHEIFLRFEFMKGYNRITSP EECHHHHHHHHHHCEEECCEEEEEEEECCCCEECCCCCCCCEEEEEEEEECCCCCCCCCC RFF CCC >Mature Secondary Structure MKKIALVLLFCSAVGFAQQDAQYTQYMHNTININPAYAGSRGVMSIFGLYRTQWVGLDGA CCHHEEEHHHHHHCCCCHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHEEECCCCC PETSTLSLNTPINSSNVGLGFSLVNDKIGPTTENNFSVDFSYSIQTSATAKLSFGIKGSA CCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEECCCEEEEEECCCCCC NIFNLDPNKLTPEHQGDPQFSDFKNKFSPNVGAGVYWHSDKGYIGLSVPNFIQTNRYDDN EEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCEEEEECCCHHHCCCCCCC DVAIFKEQINYYLIAGYVFNLDRYETIKFKPAILGKMVEGSPLQLDASANFMFNDKFVVG CEEEEEECCCEEEEEEEEEECCCEEEEEECHHHHHHCCCCCCEEEECCCCEEECCEEEEE VSYRWSAALSALAGFQINKSMYIGYAYDRETTKLNNYNSGSHEIFLRFEFMKGYNRITSP EECHHHHHHHHHHCEEECCEEEEEEEECCCCEECCCCCCCCEEEEEEEEECCCCCCCCCC RFF CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA