| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is tam [H]
Identifier: 146301677
GI number: 146301677
Start: 4693024
End: 4693791
Strand: Reverse
Name: tam [H]
Synonym: Fjoh_3939
Alternate gene names: 146301677
Gene position: 4693791-4693024 (Counterclockwise)
Preceding gene: 146301679
Following gene: 146301676
Centisome position: 76.99
GC content: 33.46
Gene sequence:
>768_bases ATGCCTTGGAATCCAGAAATATACAATACATTTAAAGACATTCGTTATAAACCATTTTATGATTTGGCTGATTTGATAAA GCCAGTCAAAAATAAGAAAGCCATTGATTTAGGATGCGGTACAGGCGAACAAACCGCTATTTTAGCAGATAAATTTAAAG AAGTCCATTTTCTTGGTGTTGATTCTTCGGCAGAAATGCTCGAAAAATCAAAAGCATTAGAAACAGAAAACCTGCATTTT CGCAGAGCATCAACCGAAGAAATGATTGAAAATGCCGAAAAATGGGATTTAATTTTTAGCAATGCCGCTTTGCAATGGTC GAATAATCATGAAATTTTGTTTCCTAAATTGATACACCTTCTTAATTCAAAAGGGCAGTTTGCAGTTCAAATGCCGATGC AACCAGAAAATAAACTCAACAAAATTTTAATCGAATTGGTTAACGAAGAACCTTTTAAAACGTATCTAAAAGGCTTTAAA AGAGATTCACCCGTTTTGAGTATTGATGAATATGCGCAGATACTATTTGACAGCGGACTCGAAGATATTCAAATCATGCA GAAAGTGTATCCCATAATTGCAAACGATCACGATACGTTGTATAATTTCATTTCAGGTTCAGCTTTAATTCCATACATGG AAAAACTTGAAGGCGGACAGAAAGAACTTTTTATAAAAACATACAAAGAAAGAATAGCAGAAAGTTTTCCTAAACTTCCG GCAATTTATTCTTTTAAAAGACTTTTGCTTTACGGAACAAAAGCATAA
Upstream 100 bases:
>100_bases AATTCTGAATGCTAAAACAAGCAGGAAATTTGTACTTTAGTAAAACACTTGCATTTAGTTAACGCTGTAAGTTGTTTTTT TAATATAAAAATTGATATAA
Downstream 100 bases:
>100_bases ATACTTATTTTCTAAACACATTACAATATGAAAGCATTAGTAATTGGGGCGACAGGCTCAACAGGAAAGTTTTTAACAGA AGAGCTTCTTAATGATAACG
Product: trans-aconitate 2-methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MPWNPEIYNTFKDIRYKPFYDLADLIKPVKNKKAIDLGCGTGEQTAILADKFKEVHFLGVDSSAEMLEKSKALETENLHF RRASTEEMIENAEKWDLIFSNAALQWSNNHEILFPKLIHLLNSKGQFAVQMPMQPENKLNKILIELVNEEPFKTYLKGFK RDSPVLSIDEYAQILFDSGLEDIQIMQKVYPIIANDHDTLYNFISGSALIPYMEKLEGGQKELFIKTYKERIAESFPKLP AIYSFKRLLLYGTKA
Sequences:
>Translated_255_residues MPWNPEIYNTFKDIRYKPFYDLADLIKPVKNKKAIDLGCGTGEQTAILADKFKEVHFLGVDSSAEMLEKSKALETENLHF RRASTEEMIENAEKWDLIFSNAALQWSNNHEILFPKLIHLLNSKGQFAVQMPMQPENKLNKILIELVNEEPFKTYLKGFK RDSPVLSIDEYAQILFDSGLEDIQIMQKVYPIIANDHDTLYNFISGSALIPYMEKLEGGQKELFIKTYKERIAESFPKLP AIYSFKRLLLYGTKA >Mature_254_residues PWNPEIYNTFKDIRYKPFYDLADLIKPVKNKKAIDLGCGTGEQTAILADKFKEVHFLGVDSSAEMLEKSKALETENLHFR RASTEEMIENAEKWDLIFSNAALQWSNNHEILFPKLIHLLNSKGQFAVQMPMQPENKLNKILIELVNEEPFKTYLKGFKR DSPVLSIDEYAQILFDSGLEDIQIMQKVYPIIANDHDTLYNFISGSALIPYMEKLEGGQKELFIKTYKERIAESFPKLPA IYSFKRLLLYGTKA
Specific function: Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate [H]
COG id: COG4106
COG function: function code R; Trans-aconitate methyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. Tam family [H]
Homologues:
Organism=Escherichia coli, GI1787798, Length=236, Percent_Identity=29.2372881355932, Blast_Score=118, Evalue=4e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 - InterPro: IPR023149 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: =2.1.1.144 [H]
Molecular weight: Translated: 29465; Mature: 29334
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPWNPEIYNTFKDIRYKPFYDLADLIKPVKNKKAIDLGCGTGEQTAILADKFKEVHFLGV CCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHEEEEEC DSSAEMLEKSKALETENLHFRRASTEEMIENAEKWDLIFSNAALQWSNNHEILFPKLIHL CCHHHHHHHHHCCCCCCCEEECCCHHHHHCCHHHHHEEEECCEEEECCCCCCHHHHHHHH LNSKGQFAVQMPMQPENKLNKILIELVNEEPFKTYLKGFKRDSPVLSIDEYAQILFDSGL HCCCCCEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC EDIQIMQKVYPIIANDHDTLYNFISGSALIPYMEKLEGGQKELFIKTYKERIAESFPKLP HHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCH AIYSFKRLLLYGTKA HHHHHHHHHHHCCCC >Mature Secondary Structure PWNPEIYNTFKDIRYKPFYDLADLIKPVKNKKAIDLGCGTGEQTAILADKFKEVHFLGV CCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHEEEEEC DSSAEMLEKSKALETENLHFRRASTEEMIENAEKWDLIFSNAALQWSNNHEILFPKLIHL CCHHHHHHHHHCCCCCCCEEECCCHHHHHCCHHHHHEEEECCEEEECCCCCCHHHHHHHH LNSKGQFAVQMPMQPENKLNKILIELVNEEPFKTYLKGFKRDSPVLSIDEYAQILFDSGL HCCCCCEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC EDIQIMQKVYPIIANDHDTLYNFISGSALIPYMEKLEGGQKELFIKTYKERIAESFPKLP HHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCH AIYSFKRLLLYGTKA HHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10567266 [H]