| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is katG
Identifier: 146301636
GI number: 146301636
Start: 4642311
End: 4644584
Strand: Reverse
Name: katG
Synonym: Fjoh_3897
Alternate gene names: 146301636
Gene position: 4644584-4642311 (Counterclockwise)
Preceding gene: 146301637
Following gene: 146301635
Centisome position: 76.18
GC content: 40.37
Gene sequence:
>2274_bases ATGGAGAATCAATCAAACGACATTAGCAAGTGCCCTTTTCATAATGGCAGTATGGATAATCAAGCCGCATCAGGTACAAA AAATAATGACTGGTGGCCTAAACAATTAAAGGTGAATATCCTGAGACAGAATTCATCTCTATCAAATCCTCTCAGCAAAG ATTTTGATTATGCAGAAGCTTTTAAAACTCTTGATCTTGAAGCTGTAAAAAAAGACCTTCATGTACTTATGACAGATTCA CAAGATTGGTGGCCGGCAGATTTTGGTCACTATGGAGGGCTTTTTATCCGTATGGCATGGCACAGTGCGGGAACTTACCG TGTACACGACGGGCGAGGCGGAGCAGGAGCGGGACAACAGCGTTTCGCACCTTTAAACAGCTGGCCTGATAATGTGAGTC TTGATAAAGCCAGAAGACTTCTTTGGCCCATAAAACAAAAATACGGACAAAAAATTTCGTGGGCTGATTTAATGATACTG ACAGGAAACGTGGCTCTTGAATCTATGGGTTTTAAAACTTTTGGATTTGCAGGAGGAAGAGCAGATGTATGGGAACCGGA CGAATCTGTTTACTGGGGTTCTGAAACAACATGGCTGGGAGGCGACGAACGTTATAATAATGGTTCTGATGGTGTGCCGA AAGATCATGGAGTTGTTTCTGCAGATGATGATGCCGACGGGAAAGTTCATTCAAGAAATTTAGAAAAACCTCTTGCAGCA GTTCAAATGGGACTTATATATGTAAATCCAGAAGGTCCTGACGGAAATCCTGATCCTATTTTAGCAGCAAAAGATATACG AGATACATTTGGCCGAATGGCTATGAATGATGAAGAAACGGTTGCTTTAATTGCCGGAGGCCATACTTTTGGTAAAACTC ACGGTGCCGCTTCATCTGATCACGTAGATAAAGAACCTGAAGCTGCTGGTTTAGAACTGCAGGGTTTTGGGTGGAAAAAT AGTTTTGGATCAGGTAAAGGTGCTGATGCTATTACAAGCGGACTTGAAGTTACATGGACCAAAACTCCAACACAATGGAG TAATAATTTCTTCGAAAACTTATTTGCTTTTGAATGGGAACTTTCTAAAAGTCCGGCAGGCGCGCACCAATGGGTTGCAA AAAATGCCGAAGCCATTATTCCTGATGCTTTTGACAGTACAAAAAAACATCTTCCAACAATGCTTACTACTGATTTATCT CTAAGGTTAGATCCAGAGTATGAAAAAATATCACGCCGCTTTTTAGAAAATCCTGATCAGTTTGCCGATGCCTTTTCCCG TGCCTGGTTTAAGTTAACACATCGTGACATGGGACCGCGTGCACGCTACCTTGGACCAGACGTTCCTCAGGAAGTATTGT TGTGGCAGGATCCTATTCCAGAAGTAAACCACAAATTAATAGACGAAAATGACATAAAACAGCTGAAAGAAAAAATACTA AATTCAGGATTAAGTATTTCTCAGTTAGTTGCCGCTGCTTGGGCTTCAGCATCTACTTTTAGAGGTTCTGACAAGCGAGG CGGTGCAAATGGAGCACGTGTAAGACTGGCTCCTCAAAAAGACTGGGAAGTAAATAACCCAGCCAAGCTTGCTCAGGTTT TAAGTAAATTAGAAACTATTCAAACAGAGTTTAATGCTTCGCAAAATGATGGTAAAAAAGTTTCTTTGGCTGATTTAATT GTTTTAGCAGGTTCTGCCGGAGTCGAAAAAGCGGCTAAAGATGCAGGAAGCTCAGTTACAGTGTCTTTTAATCCTGGTCG TATGGATGCATCTGCAGAAGAAACTGATGTTGAATCATTTGGATATCTGGAGCCAAAAGCAGATGGTTTTAGAAATTACA GAAAAACAAAATCAGCAGTTTCTACAGAGGAACTTCTTATTGATAAAGCGAATTTGCTGACTCTTACAGCACCTGAACTT ACGGTGCTATTAGGAGGTCTTCGTGTACTTGATATTAATGCAGACGGTTCAAAAAATGGTGTATTTACACATCGTCCGGG TCAATTGACCAATGATTTTTTTGTAAATCTGTTAGATATGAATACACAATGGCAGGCTGTTTCAAATGATAAAGAACTCT ATGCAGGAAATGACAGAAGCACAGGCCAGCCTAAATGGATTGCAACACGTGCAGATCTTGTTTTTGGATCTAATTCAGAA TTAAGAGCTGTTGCAGAAGTATACGCAAGCACTGATGCAAATGAAAAATTTGTAAATGATTTTATTAAGGCATGGACTAA AGTCATGAATCTGGATAGATTTGATTTAGCTTAA
Upstream 100 bases:
>100_bases CAATAAGTTTTATCTATCAGAAAAGAATTAGAAATGATAAATACTCAGGATTTTCTCTTTCTATACTTAGTAATTTAGTA AAAAATAAAAATTTCGAATT
Downstream 100 bases:
>100_bases TAGCTGAATATTTATAATTGTATATAAGACGCCATTAATTGGCGTCTTTTTTTTGATACAAGTCATCCTGATAAAAATTG ATTTCTATACTCACAGTTTG
Product: catalase/peroxidase HPI
Products: NA
Alternate protein names: CP; Peroxidase/catalase
Number of amino acids: Translated: 757; Mature: 757
Protein sequence:
>757_residues MENQSNDISKCPFHNGSMDNQAASGTKNNDWWPKQLKVNILRQNSSLSNPLSKDFDYAEAFKTLDLEAVKKDLHVLMTDS QDWWPADFGHYGGLFIRMAWHSAGTYRVHDGRGGAGAGQQRFAPLNSWPDNVSLDKARRLLWPIKQKYGQKISWADLMIL TGNVALESMGFKTFGFAGGRADVWEPDESVYWGSETTWLGGDERYNNGSDGVPKDHGVVSADDDADGKVHSRNLEKPLAA VQMGLIYVNPEGPDGNPDPILAAKDIRDTFGRMAMNDEETVALIAGGHTFGKTHGAASSDHVDKEPEAAGLELQGFGWKN SFGSGKGADAITSGLEVTWTKTPTQWSNNFFENLFAFEWELSKSPAGAHQWVAKNAEAIIPDAFDSTKKHLPTMLTTDLS LRLDPEYEKISRRFLENPDQFADAFSRAWFKLTHRDMGPRARYLGPDVPQEVLLWQDPIPEVNHKLIDENDIKQLKEKIL NSGLSISQLVAAAWASASTFRGSDKRGGANGARVRLAPQKDWEVNNPAKLAQVLSKLETIQTEFNASQNDGKKVSLADLI VLAGSAGVEKAAKDAGSSVTVSFNPGRMDASAEETDVESFGYLEPKADGFRNYRKTKSAVSTEELLIDKANLLTLTAPEL TVLLGGLRVLDINADGSKNGVFTHRPGQLTNDFFVNLLDMNTQWQAVSNDKELYAGNDRSTGQPKWIATRADLVFGSNSE LRAVAEVYASTDANEKFVNDFIKAWTKVMNLDRFDLA
Sequences:
>Translated_757_residues MENQSNDISKCPFHNGSMDNQAASGTKNNDWWPKQLKVNILRQNSSLSNPLSKDFDYAEAFKTLDLEAVKKDLHVLMTDS QDWWPADFGHYGGLFIRMAWHSAGTYRVHDGRGGAGAGQQRFAPLNSWPDNVSLDKARRLLWPIKQKYGQKISWADLMIL TGNVALESMGFKTFGFAGGRADVWEPDESVYWGSETTWLGGDERYNNGSDGVPKDHGVVSADDDADGKVHSRNLEKPLAA VQMGLIYVNPEGPDGNPDPILAAKDIRDTFGRMAMNDEETVALIAGGHTFGKTHGAASSDHVDKEPEAAGLELQGFGWKN SFGSGKGADAITSGLEVTWTKTPTQWSNNFFENLFAFEWELSKSPAGAHQWVAKNAEAIIPDAFDSTKKHLPTMLTTDLS LRLDPEYEKISRRFLENPDQFADAFSRAWFKLTHRDMGPRARYLGPDVPQEVLLWQDPIPEVNHKLIDENDIKQLKEKIL NSGLSISQLVAAAWASASTFRGSDKRGGANGARVRLAPQKDWEVNNPAKLAQVLSKLETIQTEFNASQNDGKKVSLADLI VLAGSAGVEKAAKDAGSSVTVSFNPGRMDASAEETDVESFGYLEPKADGFRNYRKTKSAVSTEELLIDKANLLTLTAPEL TVLLGGLRVLDINADGSKNGVFTHRPGQLTNDFFVNLLDMNTQWQAVSNDKELYAGNDRSTGQPKWIATRADLVFGSNSE LRAVAEVYASTDANEKFVNDFIKAWTKVMNLDRFDLA >Mature_757_residues MENQSNDISKCPFHNGSMDNQAASGTKNNDWWPKQLKVNILRQNSSLSNPLSKDFDYAEAFKTLDLEAVKKDLHVLMTDS QDWWPADFGHYGGLFIRMAWHSAGTYRVHDGRGGAGAGQQRFAPLNSWPDNVSLDKARRLLWPIKQKYGQKISWADLMIL TGNVALESMGFKTFGFAGGRADVWEPDESVYWGSETTWLGGDERYNNGSDGVPKDHGVVSADDDADGKVHSRNLEKPLAA VQMGLIYVNPEGPDGNPDPILAAKDIRDTFGRMAMNDEETVALIAGGHTFGKTHGAASSDHVDKEPEAAGLELQGFGWKN SFGSGKGADAITSGLEVTWTKTPTQWSNNFFENLFAFEWELSKSPAGAHQWVAKNAEAIIPDAFDSTKKHLPTMLTTDLS LRLDPEYEKISRRFLENPDQFADAFSRAWFKLTHRDMGPRARYLGPDVPQEVLLWQDPIPEVNHKLIDENDIKQLKEKIL NSGLSISQLVAAAWASASTFRGSDKRGGANGARVRLAPQKDWEVNNPAKLAQVLSKLETIQTEFNASQNDGKKVSLADLI VLAGSAGVEKAAKDAGSSVTVSFNPGRMDASAEETDVESFGYLEPKADGFRNYRKTKSAVSTEELLIDKANLLTLTAPEL TVLLGGLRVLDINADGSKNGVFTHRPGQLTNDFFVNLLDMNTQWQAVSNDKELYAGNDRSTGQPKWIATRADLVFGSNSE LRAVAEVYASTDANEKFVNDFIKAWTKVMNLDRFDLA
Specific function: Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
COG id: COG0376
COG function: function code P; Catalase (peroxidase I)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peroxidase family. Peroxidase/catalase subfamily
Homologues:
Organism=Escherichia coli, GI1790378, Length=748, Percent_Identity=63.5026737967914, Blast_Score=920, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6322919, Length=342, Percent_Identity=26.0233918128655, Blast_Score=92, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KATG_FLAJ1 (A5FD11)
Other databases:
- EMBL: CP000685 - RefSeq: YP_001196227.1 - ProteinModelPortal: A5FD11 - SMR: A5FD11 - STRING: A5FD11 - PeroxiBase: 3617 - GeneID: 5090128 - GenomeReviews: CP000685_GR - KEGG: fjo:Fjoh_3897 - eggNOG: COG0376 - HOGENOM: HBG285610 - OMA: FEWELTK - ProtClustDB: PRK15061 - BioCyc: FJOH376686:FJOH_3897-MONOMER - HAMAP: MF_01961 - InterPro: IPR000763 - InterPro: IPR010255 - InterPro: IPR002016 - InterPro: IPR019794 - InterPro: IPR019793 - PRINTS: PR00460 - PRINTS: PR00458 - TIGRFAMs: TIGR00198
Pfam domain/function: PF00141 peroxidase; SSF48113 Peroxidase_super
EC number: =1.11.1.6; =1.11.1.7
Molecular weight: Translated: 83446; Mature: 83446
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: PS00435 PEROXIDASE_1; PS00436 PEROXIDASE_2; PS50873 PEROXIDASE_4
Important sites: ACT_SITE 101-101
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENQSNDISKCPFHNGSMDNQAASGTKNNDWWPKQLKVNILRQNSSLSNPLSKDFDYAEA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHH FKTLDLEAVKKDLHVLMTDSQDWWPADFGHYGGLFIRMAWHSAGTYRVHDGRGGAGAGQQ HHHCCHHHHHHCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCC RFAPLNSWPDNVSLDKARRLLWPIKQKYGQKISWADLMILTGNVALESMGFKTFGFAGGR CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCEEHHHCCCEEEECCCCC ADVWEPDESVYWGSETTWLGGDERYNNGSDGVPKDHGVVSADDDADGKVHSRNLEKPLAA CCCCCCCCCEEECCCCEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCEECCCHHHHHHH VQMGLIYVNPEGPDGNPDPILAAKDIRDTFGRMAMNDEETVALIAGGHTFGKTHGAASSD HEEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCC HVDKEPEAAGLELQGFGWKNSFGSGKGADAITSGLEVTWTKTPTQWSNNFFENLFAFEWE CCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHCCCEEEEECCCCHHHHHHHHHHHEEEEE LSKSPAGAHQWVAKNAEAIIPDAFDSTKKHLPTMLTTDLSLRLDPEYEKISRRFLENPDQ CCCCCCCHHHHHHCCCCEECCCCHHHHHHHCCCEEECCEEEEECCCHHHHHHHHHCCHHH FADAFSRAWFKLTHRDMGPRARYLGPDVPQEVLLWQDPIPEVNHKLIDENDIKQLKEKIL HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHEECCCCCHHHHHHCCHHHHHHHHHHHH NSGLSISQLVAAAWASASTFRGSDKRGGANGARVRLAPQKDWEVNNPAKLAQVLSKLETI HCCCCHHHHHHHHHHCCHHCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHH QTEFNASQNDGKKVSLADLIVLAGSAGVEKAAKDAGSSVTVSFNPGRMDASAEETDVESF HHHHCCCCCCCCEEEHHHEEEECCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHC GYLEPKADGFRNYRKTKSAVSTEELLIDKANLLTLTAPELTVLLGGLRVLDINADGSKNG CCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCEEEEECCHHHHHCCCEEEEEECCCCCCCC VFTHRPGQLTNDFFVNLLDMNTQWQAVSNDKELYAGNDRSTGQPKWIATRADLVFGSNSE EEEECCCCCCCCCEEEEECCCCCEEEECCCCEEEECCCCCCCCCCEEEEEEEEEECCCCH LRAVAEVYASTDANEKFVNDFIKAWTKVMNLDRFDLA HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHCCC >Mature Secondary Structure MENQSNDISKCPFHNGSMDNQAASGTKNNDWWPKQLKVNILRQNSSLSNPLSKDFDYAEA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHH FKTLDLEAVKKDLHVLMTDSQDWWPADFGHYGGLFIRMAWHSAGTYRVHDGRGGAGAGQQ HHHCCHHHHHHCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCC RFAPLNSWPDNVSLDKARRLLWPIKQKYGQKISWADLMILTGNVALESMGFKTFGFAGGR CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCEEHHHCCCEEEECCCCC ADVWEPDESVYWGSETTWLGGDERYNNGSDGVPKDHGVVSADDDADGKVHSRNLEKPLAA CCCCCCCCCEEECCCCEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCEECCCHHHHHHH VQMGLIYVNPEGPDGNPDPILAAKDIRDTFGRMAMNDEETVALIAGGHTFGKTHGAASSD HEEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCC HVDKEPEAAGLELQGFGWKNSFGSGKGADAITSGLEVTWTKTPTQWSNNFFENLFAFEWE CCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHCCCEEEEECCCCHHHHHHHHHHHEEEEE LSKSPAGAHQWVAKNAEAIIPDAFDSTKKHLPTMLTTDLSLRLDPEYEKISRRFLENPDQ CCCCCCCHHHHHHCCCCEECCCCHHHHHHHCCCEEECCEEEEECCCHHHHHHHHHCCHHH FADAFSRAWFKLTHRDMGPRARYLGPDVPQEVLLWQDPIPEVNHKLIDENDIKQLKEKIL HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHEECCCCCHHHHHHCCHHHHHHHHHHHH NSGLSISQLVAAAWASASTFRGSDKRGGANGARVRLAPQKDWEVNNPAKLAQVLSKLETI HCCCCHHHHHHHHHHCCHHCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHH QTEFNASQNDGKKVSLADLIVLAGSAGVEKAAKDAGSSVTVSFNPGRMDASAEETDVESF HHHHCCCCCCCCEEEHHHEEEECCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHC GYLEPKADGFRNYRKTKSAVSTEELLIDKANLLTLTAPELTVLLGGLRVLDINADGSKNG CCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCEEEEECCHHHHHCCCEEEEEECCCCCCCC VFTHRPGQLTNDFFVNLLDMNTQWQAVSNDKELYAGNDRSTGQPKWIATRADLVFGSNSE EEEECCCCCCCCCEEEEECCCCCEEEECCCCEEEECCCCCCCCCCEEEEEEEEEECCCCH LRAVAEVYASTDANEKFVNDFIKAWTKVMNLDRFDLA HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA