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The map label for this gene is 146301635

Identifier: 146301635

GI number: 146301635

Start: 4641739

End: 4642197

Strand: Reverse

Name: 146301635

Synonym: Fjoh_3896

Alternate gene names: NA

Gene position: 4642197-4641739 (Counterclockwise)

Preceding gene: 146301636

Following gene: 146301634

Centisome position: 76.14

GC content: 35.08

Gene sequence:

>459_bases
ATGAGTGATAATTTTACAAACGAATATTTTGGCATAGGAATACAAAATGGTAAAACACCAGAAAACTTAGGTGTTTTGTG
GAGATCAGCACAAAATCTGGGTGCATCTTTTATATTTACCATAGGAAACCGATATGCCAAACAAGCCTGTGATACCCACG
ATGCAGTAAAAGCAATTCCTTATTTTCATTATGAAACTTTTGAGGCCTTTTTTGAAAATTTACCAAAAGGCGCACGTCTG
GTTGGAGTTGAATTATCTGAAAAAGCAGTCGATTTAGAAACCTTTGAACACCCAAGACGATGCGTTTATTTATTGGGAGC
AGAAGATCATGGTTTATCGAAAAAAGCAATGGATAAATGCCATCATTTAGTAAAATTTAAATCGGAAAAAAGTTTAAATG
TTGCTGTGGCGGGAACTGTTGTGATGTATGACAGGAATTTATCCAAACCAAGATCTTAA

Upstream 100 bases:

>100_bases
ATAATTGTATATAAGACGCCATTAATTGGCGTCTTTTTTTTGATACAAGTCATCCTGATAAAAATTGATTTCTATACTCA
CAGTTTGTACTTTTGCCCTT

Downstream 100 bases:

>100_bases
ACGAAAAATTTAATAATTTGTATTTCATAATAGTTAAAGAAAATTAGCAGATTTTTTTTATGATAAACGACTATAAAAAG
CATGATTTATATGGCATGAC

Product: tRNA/rRNA methyltransferase SpoU

Products: NA

Alternate protein names: RNA Methyltransferase; 23S RRNA Methyltransferase; RNA Methyltransferase TrmH Family; Cold-Shock RNA Methyltransferase; rRNA Methylase; TRNA/RRNA MethyltransferaU; rRNA Methyltransferase; TrmH Family RNA Methyltransferase; SpoU RRNA Methylase Family Protein; rRNA Methylase-Family Protein; SpoU Class RRNA Methylase

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MSDNFTNEYFGIGIQNGKTPENLGVLWRSAQNLGASFIFTIGNRYAKQACDTHDAVKAIPYFHYETFEAFFENLPKGARL
VGVELSEKAVDLETFEHPRRCVYLLGAEDHGLSKKAMDKCHHLVKFKSEKSLNVAVAGTVVMYDRNLSKPRS

Sequences:

>Translated_152_residues
MSDNFTNEYFGIGIQNGKTPENLGVLWRSAQNLGASFIFTIGNRYAKQACDTHDAVKAIPYFHYETFEAFFENLPKGARL
VGVELSEKAVDLETFEHPRRCVYLLGAEDHGLSKKAMDKCHHLVKFKSEKSLNVAVAGTVVMYDRNLSKPRS
>Mature_151_residues
SDNFTNEYFGIGIQNGKTPENLGVLWRSAQNLGASFIFTIGNRYAKQACDTHDAVKAIPYFHYETFEAFFENLPKGARLV
GVELSEKAVDLETFEHPRRCVYLLGAEDHGLSKKAMDKCHHLVKFKSEKSLNVAVAGTVVMYDRNLSKPRS

Specific function: Unknown

COG id: COG0219

COG function: function code J; Predicted rRNA methylase (SpoU class)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17106; Mature: 16974

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDNFTNEYFGIGIQNGKTPENLGVLWRSAQNLGASFIFTIGNRYAKQACDTHDAVKAIP
CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCHHHHHHHCC
YFHYETFEAFFENLPKGARLVGVELSEKAVDLETFEHPRRCVYLLGAEDHGLSKKAMDKC
CHHHHHHHHHHHHCCCCCEEEEEECCCHHCCHHHHCCCCEEEEEECCCCCCCCHHHHHHH
HHLVKFKSEKSLNVAVAGTVVMYDRNLSKPRS
HHHHHCCCCCCCEEEEEEEEEEEECCCCCCCC
>Mature Secondary Structure 
SDNFTNEYFGIGIQNGKTPENLGVLWRSAQNLGASFIFTIGNRYAKQACDTHDAVKAIP
CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCHHHHHHHCC
YFHYETFEAFFENLPKGARLVGVELSEKAVDLETFEHPRRCVYLLGAEDHGLSKKAMDKC
CHHHHHHHHHHHHCCCCCEEEEEECCCHHCCHHHHCCCCEEEEEECCCCCCCCHHHHHHH
HHLVKFKSEKSLNVAVAGTVVMYDRNLSKPRS
HHHHHCCCCCCCEEEEEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA