| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301447
Identifier: 146301447
GI number: 146301447
Start: 4397625
End: 4398080
Strand: Reverse
Name: 146301447
Synonym: Fjoh_3705
Alternate gene names: NA
Gene position: 4398080-4397625 (Counterclockwise)
Preceding gene: 146301448
Following gene: 146301446
Centisome position: 72.14
GC content: 26.54
Gene sequence:
>456_bases ATGAAGATAAAACAAACCTTGAGAATAATTAATGTCGTAATTGTTTTTTTTACTCTAACTTCATGTTTTGAAGATAATGC GACAGATTCGACATTTGAAAATTTAATTAAATCAACCTCAGTTGACATACAAAAAACTTATGAAATTAAATTGGATAAGA ACATTAAATTTGATTATGATAAATTATTTATTTTTGAAGGTCCTAGATTTCCTTCTGAAATAGAAGGAGTGACAAAGATT AAATATGATGATGTATTGGATGATGGTGACAGGTTATACCTTTATGTAAAAGGGAATATTATAACTAAAAAAGAAAAGTC AACTTCTAAAGATGTTAATATCCATCGCCTAATGAACGAGCAGGGATATACTGTTCTTTATCCTAATACTGTCATATTTG CCAAAAAGCAAAAAAATGGAGATGATTTTTATTATGATACTTTTATAAATAACTAG
Upstream 100 bases:
>100_bases AAAAACGGAAATATTTCAATATCCAGAAAAAAAATATCAGAAAAACAATATAATGCAAGTATGCAAATACTTAATAACTT AGATAGAAATGGATTCAGCG
Downstream 100 bases:
>100_bases TCTCTTAAATTTTTAGAAAGCCATTCCATAACGGAGTGGCTTTTGCTTTTATAGTAGTTTAAAGTGTACCAAACCGTTAA AATAGAACTCAGATTATCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MKIKQTLRIINVVIVFFTLTSCFEDNATDSTFENLIKSTSVDIQKTYEIKLDKNIKFDYDKLFIFEGPRFPSEIEGVTKI KYDDVLDDGDRLYLYVKGNIITKKEKSTSKDVNIHRLMNEQGYTVLYPNTVIFAKKQKNGDDFYYDTFINN
Sequences:
>Translated_151_residues MKIKQTLRIINVVIVFFTLTSCFEDNATDSTFENLIKSTSVDIQKTYEIKLDKNIKFDYDKLFIFEGPRFPSEIEGVTKI KYDDVLDDGDRLYLYVKGNIITKKEKSTSKDVNIHRLMNEQGYTVLYPNTVIFAKKQKNGDDFYYDTFINN >Mature_151_residues MKIKQTLRIINVVIVFFTLTSCFEDNATDSTFENLIKSTSVDIQKTYEIKLDKNIKFDYDKLFIFEGPRFPSEIEGVTKI KYDDVLDDGDRLYLYVKGNIITKKEKSTSKDVNIHRLMNEQGYTVLYPNTVIFAKKQKNGDDFYYDTFINN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17700; Mature: 17700
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKQTLRIINVVIVFFTLTSCFEDNATDSTFENLIKSTSVDIQKTYEIKLDKNIKFDYD CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCEECCE KLFIFEGPRFPSEIEGVTKIKYDDVLDDGDRLYLYVKGNIITKKEKSTSKDVNIHRLMNE EEEEEECCCCCHHCCCEEEEEECCCCCCCCEEEEEEECCEEECCCCCCCCCCEEEEECCC QGYTVLYPNTVIFAKKQKNGDDFYYDTFINN CCCEEECCCEEEEEEECCCCCCEEEEEEECC >Mature Secondary Structure MKIKQTLRIINVVIVFFTLTSCFEDNATDSTFENLIKSTSVDIQKTYEIKLDKNIKFDYD CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCEECCE KLFIFEGPRFPSEIEGVTKIKYDDVLDDGDRLYLYVKGNIITKKEKSTSKDVNIHRLMNE EEEEEECCCCCHHCCCEEEEEECCCCCCCCEEEEEEECCEEECCCCCCCCCCEEEEECCC QGYTVLYPNTVIFAKKQKNGDDFYYDTFINN CCCEEECCCEEEEEEECCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA