| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301448
Identifier: 146301448
GI number: 146301448
Start: 4398049
End: 4398861
Strand: Reverse
Name: 146301448
Synonym: Fjoh_3706
Alternate gene names: NA
Gene position: 4398861-4398049 (Counterclockwise)
Preceding gene: 146301449
Following gene: 146301447
Centisome position: 72.15
GC content: 33.21
Gene sequence:
>813_bases TTGAACTGGGACAGCTTTAAGTATAGAAATTATGATTACGCTATTGGAAGATTTATGAGTTTAGACCCGTTAGCGGAAAA GTATAATTTTCAATCACCTTATAATTTTTCTGAGAATAGAGTTGTTGATTCAAGAGAATTAGAAGGTTTAGAAGCAATTC GAATGACAGGAGTTGGTGGAGAAACAAGTTTAATGACAAGACCTGCTAATAGTAACTTACAGAAATCAGCTTCTGTGGCA TTTGCTTATTTTCATCCAATTGCCGCTAATTCTATTGGTTCAATAGAAAGAGGAAGTACAAATATTTCGAGTGTTAGTGG TCGTATTGCCAGACACATGACAGATAATGGAAATATGTCTGGAGGTATTGGTTCAGAGAGTAATGCATTTAGACACTCTT TATGGTCAGCGACTATGAGTACTAGATTTGGAGAAGAGATTGCTACTCAAGCTGGAAATGCGCATGAAGGAGCAAAGATT TTCACTTCTTTATCAATTGATTTTAATGAACCATTAGTTCAGAATGCAGATTATGCTGATTCTGTAGTAGATTTGTTAAA CAATGAAATAGGTCGTCAGATTTCAGAAGGAATAGGAAATGAGTTTACTAGTCAAACAGACATAGCTAAAGAGGTGTTAA ATGTGCAAAGAACAAAAGGTTTATGGGAAGTAAGTACAGATAAAAACGGAAATATTTCAATATCCAGAAAAAAAATATCA GAAAAACAATATAATGCAAGTATGCAAATACTTAATAACTTAGATAGAAATGGATTCAGCGATGAAGATAAAACAAACCT TGAGAATAATTAA
Upstream 100 bases:
>100_bases TATATTGAGATTTTTTACAAGGGTTTGTTTTGTATAAAAAAGGTTTACAGAACCCTATAAGTATAAGTTCCAAGGTCAAG AGCGTCAGGATGAGTTATCA
Downstream 100 bases:
>100_bases TGTCGTAATTGTTTTTTTTACTCTAACTTCATGTTTTGAAGATAATGCGACAGATTCGACATTTGAAAATTTAATTAAAT CAACCTCAGTTGACATACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MNWDSFKYRNYDYAIGRFMSLDPLAEKYNFQSPYNFSENRVVDSRELEGLEAIRMTGVGGETSLMTRPANSNLQKSASVA FAYFHPIAANSIGSIERGSTNISSVSGRIARHMTDNGNMSGGIGSESNAFRHSLWSATMSTRFGEEIATQAGNAHEGAKI FTSLSIDFNEPLVQNADYADSVVDLLNNEIGRQISEGIGNEFTSQTDIAKEVLNVQRTKGLWEVSTDKNGNISISRKKIS EKQYNASMQILNNLDRNGFSDEDKTNLENN
Sequences:
>Translated_270_residues MNWDSFKYRNYDYAIGRFMSLDPLAEKYNFQSPYNFSENRVVDSRELEGLEAIRMTGVGGETSLMTRPANSNLQKSASVA FAYFHPIAANSIGSIERGSTNISSVSGRIARHMTDNGNMSGGIGSESNAFRHSLWSATMSTRFGEEIATQAGNAHEGAKI FTSLSIDFNEPLVQNADYADSVVDLLNNEIGRQISEGIGNEFTSQTDIAKEVLNVQRTKGLWEVSTDKNGNISISRKKIS EKQYNASMQILNNLDRNGFSDEDKTNLENN >Mature_270_residues MNWDSFKYRNYDYAIGRFMSLDPLAEKYNFQSPYNFSENRVVDSRELEGLEAIRMTGVGGETSLMTRPANSNLQKSASVA FAYFHPIAANSIGSIERGSTNISSVSGRIARHMTDNGNMSGGIGSESNAFRHSLWSATMSTRFGEEIATQAGNAHEGAKI FTSLSIDFNEPLVQNADYADSVVDLLNNEIGRQISEGIGNEFTSQTDIAKEVLNVQRTKGLWEVSTDKNGNISISRKKIS EKQYNASMQILNNLDRNGFSDEDKTNLENN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29899; Mature: 29899
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWDSFKYRNYDYAIGRFMSLDPLAEKYNFQSPYNFSENRVVDSRELEGLEAIRMTGVGG CCCCCCEECCCHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCHHHHCCHHHHEEECCCC ETSLMTRPANSNLQKSASVAFAYFHPIAANSIGSIERGSTNISSVSGRIARHMTDNGNMS CCCEEECCCCCCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC GGIGSESNAFRHSLWSATMSTRFGEEIATQAGNAHEGAKIFTSLSIDFNEPLVQNADYAD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHCCCCHHH SVVDLLNNEIGRQISEGIGNEFTSQTDIAKEVLNVQRTKGLWEVSTDKNGNISISRKKIS HHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEHHHHH EKQYNASMQILNNLDRNGFSDEDKTNLENN HHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MNWDSFKYRNYDYAIGRFMSLDPLAEKYNFQSPYNFSENRVVDSRELEGLEAIRMTGVGG CCCCCCEECCCHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCHHHHCCHHHHEEECCCC ETSLMTRPANSNLQKSASVAFAYFHPIAANSIGSIERGSTNISSVSGRIARHMTDNGNMS CCCEEECCCCCCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC GGIGSESNAFRHSLWSATMSTRFGEEIATQAGNAHEGAKIFTSLSIDFNEPLVQNADYAD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHCCCCHHH SVVDLLNNEIGRQISEGIGNEFTSQTDIAKEVLNVQRTKGLWEVSTDKNGNISISRKKIS HHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEHHHHH EKQYNASMQILNNLDRNGFSDEDKTNLENN HHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA