| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301428
Identifier: 146301428
GI number: 146301428
Start: 4377531
End: 4378226
Strand: Reverse
Name: 146301428
Synonym: Fjoh_3686
Alternate gene names: NA
Gene position: 4378226-4377531 (Counterclockwise)
Preceding gene: 146301429
Following gene: 146301425
Centisome position: 71.81
GC content: 29.45
Gene sequence:
>696_bases ATGTCTGAATATGCTGTTACTGTTGATGGAGAATTACTTGATTCAAATTTGTTTGAAGAAAAATCTTGGGATCAATTAAA AAAAGATTACAAGATTGGCGATTTGAAAATGATATGCTGTGGAGCTAATGCCGTTCCTAAAACGAGTATTAAATACAATA GATTTTTTGCACATCAATCCATTGAATGTACTACTGCGCCAGAGACTATCTGGCATAAGACATCAAAAAAGATTATAGTG GAGGAATTTTCTAAATTAGGTTTTAGAGCAATTGAAGAGCAAATTGGGAATGGATGGATTGCGGATGTTTATGTGGAATT AGATGGTCGAAAAATTGCCATTGAACTTCAGCAATCTCCTCAAACACTTAAAGTTTATTTTGAAAGACAAAAAAAATATT CAGAATTTCAAATTGAAGCATATTGGCTATTATTTCCTCCTCGATATCTTACAATTATTAAAGCAATAAAACATTATCGA TTAAAAAATGAGTTCAATAATAAATGTCCTAATGCAGGTTTTTTTCCATCATTGAATAATCTTCCTGTTTTCTATATTGA TGATATTGAATATAAGATCAAAGGTGTAGGTTTATTCAACCACACAATAGAAGATTTTGTAATTAGTATTGTAAATAACA AACTATCTTATCTCAGTACTTGGTATATAGAAGGAAAAAAAACTTTACTAAAATAG
Upstream 100 bases:
>100_bases GTGATATTTACAACGATGACTGATCAGACTAATTTGACTAGAACTGTTTAAATAAAACGTTATTAGTAATTTTAATCAAT GAATTTTAAATAATTATAAT
Downstream 100 bases:
>100_bases TTTATCTATAGTATGGATGTACTAACGAAAATAGGAGACAAAGTTAAGGGTGTAATTTTACACCCTTAATTATTTTAAAT CCCTTTATAAAGACTTCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MSEYAVTVDGELLDSNLFEEKSWDQLKKDYKIGDLKMICCGANAVPKTSIKYNRFFAHQSIECTTAPETIWHKTSKKIIV EEFSKLGFRAIEEQIGNGWIADVYVELDGRKIAIELQQSPQTLKVYFERQKKYSEFQIEAYWLLFPPRYLTIIKAIKHYR LKNEFNNKCPNAGFFPSLNNLPVFYIDDIEYKIKGVGLFNHTIEDFVISIVNNKLSYLSTWYIEGKKTLLK
Sequences:
>Translated_231_residues MSEYAVTVDGELLDSNLFEEKSWDQLKKDYKIGDLKMICCGANAVPKTSIKYNRFFAHQSIECTTAPETIWHKTSKKIIV EEFSKLGFRAIEEQIGNGWIADVYVELDGRKIAIELQQSPQTLKVYFERQKKYSEFQIEAYWLLFPPRYLTIIKAIKHYR LKNEFNNKCPNAGFFPSLNNLPVFYIDDIEYKIKGVGLFNHTIEDFVISIVNNKLSYLSTWYIEGKKTLLK >Mature_230_residues SEYAVTVDGELLDSNLFEEKSWDQLKKDYKIGDLKMICCGANAVPKTSIKYNRFFAHQSIECTTAPETIWHKTSKKIIVE EFSKLGFRAIEEQIGNGWIADVYVELDGRKIAIELQQSPQTLKVYFERQKKYSEFQIEAYWLLFPPRYLTIIKAIKHYRL KNEFNNKCPNAGFFPSLNNLPVFYIDDIEYKIKGVGLFNHTIEDFVISIVNNKLSYLSTWYIEGKKTLLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26995; Mature: 26864
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEYAVTVDGELLDSNLFEEKSWDQLKKDYKIGDLKMICCGANAVPKTSIKYNRFFAHQS CCCEEEEECCHHHCCHHCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEECCCC IECTTAPETIWHKTSKKIIVEEFSKLGFRAIEEQIGNGWIADVYVELDGRKIAIELQQSP EEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCEEEEEEECCCC QTLKVYFERQKKYSEFQIEAYWLLFPPRYLTIIKAIKHYRLKNEFNNKCPNAGFFPSLNN CHHHHHHHHHHCCCEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC LPVFYIDDIEYKIKGVGLFNHTIEDFVISIVNNKLSYLSTWYIEGKKTLLK CCEEEECCCEEEEEEEEEHHHHHHHHHHHHHHCHHHEEEEEEECCCHHHCC >Mature Secondary Structure SEYAVTVDGELLDSNLFEEKSWDQLKKDYKIGDLKMICCGANAVPKTSIKYNRFFAHQS CCEEEEECCHHHCCHHCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEECCCC IECTTAPETIWHKTSKKIIVEEFSKLGFRAIEEQIGNGWIADVYVELDGRKIAIELQQSP EEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCEEEEEEECCCC QTLKVYFERQKKYSEFQIEAYWLLFPPRYLTIIKAIKHYRLKNEFNNKCPNAGFFPSLNN CHHHHHHHHHHCCCEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC LPVFYIDDIEYKIKGVGLFNHTIEDFVISIVNNKLSYLSTWYIEGKKTLLK CCEEEECCCEEEEEEEEEHHHHHHHHHHHHHHCHHHEEEEEEECCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA