Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301429

Identifier: 146301429

GI number: 146301429

Start: 4378411

End: 4380195

Strand: Reverse

Name: 146301429

Synonym: Fjoh_3687

Alternate gene names: NA

Gene position: 4380195-4378411 (Counterclockwise)

Preceding gene: 146301430

Following gene: 146301428

Centisome position: 71.84

GC content: 28.4

Gene sequence:

>1785_bases
ATGACTTCAGATAATTTTAAAATAGTAAGTGTTTCCTCAAGTTTTATAAAAATTGAAGTAATAGATCCTTCTTTATTTGA
AAATCAATTTAATATTGGAAGCTATATAAAGATCCCATACAAAAATATTGAAAATAAGTATGTGGTTGGTGTAATTGAAA
ATTATAATATAAAAGATAATAATATTTCGAAAGGAGATGGAATTGAGGAAACAATATCAAATGGACCATCTTTTGTTCTT
GAGGTTAAATTAACTGGTACAATGACTAAATTTAATGATTCAGATTTATTTGAAAGAGGCGGTCATGGTATACCCCTTCC
TCCAAATAACGGTATTGAATTGTTAAATGAGAAAGAATTGAATAATATATATTCAGGAAAATTAGTAGAGAATGATAAAT
TTTGTTTTTCTAAATTAGTTCAAAATGTAGAGATTGATGTACCAGTTAGTGGCAATAAATTTTTTAATAAACATTTTGCA
ATTGTTGGCTCGACCGGTTCAGGAAAATCTCACACTGTTGCTAAAATACTACAGGAGGCTTTAATTGCCAAAAAAGGAAG
CTATGAAGGTTTAAACAATTCTCATATTGTAATTTTTGATATTCACGGTGAATATAAAACAGCTTTTCCACAAGCAAACT
ATATTGATATACAGAACCTAGTATTGCCATACTGGCTTTTAAATAGTGAAGAATTGGAAGAATTGTTTATCGAAACCGAG
GCTAATGATCATAATCAAAGAAGTGCATTTCAAGAGGCTATTACATCAAATAAGAAATTAAAAAGCACATTAGATCCAAA
ATTGAAAGCAAAATTAAATTATGATTCTCCATCTTTTTTTGATTTAAATGAGATCTTAATATATTTTAAAAACAGGAATA
ATGAGCAAAAACAAAAATCAAATACTATAGAATGGTTTGACTTAAAAGGTGAAAAATTTATATTTAATGAAGAGACAAAT
CATAATTTATTTTCAGGAATATTAAAACCGGTTGACGGAGCAACTACTGGCACACAAAATGCCAGATTTATTAATTTTAT
AAATAGATTAGAAATTAAATTAAATGATAAACGTTTAGATTTTTTATTAGGTGATGCTTCAAAAAAAATAACTTTTATAG
ATACTATCAAGCAATTCATTGGTTATCCTTGTAAGGTACAAAATGAAGAAGGCGTAATCAACAAAGAAAAATCAAATATT
ACAATAATTGATTTAGGAGGTATACCTTTTGAAGTGCTTAGTATAACTGTCTCACTGATTTCTAGAATGCTCTTTGAATT
TGGTTATCATTCCACTAAACTTGCTAGTCATGAAGATGATTGTGAAGTGCCTTTGTTATTAGTATATGAAGAGGCACATA
AGTATGTTCCAAAATCTGACTTGGTAAAATTTAGAGCCTCTAAAAATGCGATTGAACGAATTGCTAAGGAAGGTAGAAAA
TATGGAGTTACATTATCGATTGTAAGCCAAAGACCTTCTGAAATTTCAGATACAATTTTTTCTCAATGTAATAATTTTGT
AACGATGAGGTTGACTAATCCAGAAGATCAAAATTATGTAAAAAAATTATTACCCGATACTTTAGGGAATTTAACAGACT
CTTTATCAACTCTTCAATCTGGAGAGGCTCTAATTATAGGAGAAGCAATTGCTTTGCCTTCATTAGTAAAGATAAATCGA
TGTGAACCAGAACCAAAATCTTCTGATATTAAATATTTTGAAATTTGGAAAGATCCTTGGATTGATGCTGAAATTCAAAA
GGTTATTGGTCTTTGGCAAAAATAA

Upstream 100 bases:

>100_bases
TTTCATGGAAGATTTGAATAATAAATTAGAAGAGAAATCTTTCATAAAAATAGATCAAATAGATACAAAACAAGTTCAAA
AACTTTTTAATACTTAAATC

Downstream 100 bases:

>100_bases
TCTTTTTTAAAAGTAATGTACGTAGTTTGTGCGAATTATTGTTTTTTATGTGATTTTAATTTCTATAAATTCCTCTTACT
TTTAGTGATATTTACAACGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 594; Mature: 593

Protein sequence:

>594_residues
MTSDNFKIVSVSSSFIKIEVIDPSLFENQFNIGSYIKIPYKNIENKYVVGVIENYNIKDNNISKGDGIEETISNGPSFVL
EVKLTGTMTKFNDSDLFERGGHGIPLPPNNGIELLNEKELNNIYSGKLVENDKFCFSKLVQNVEIDVPVSGNKFFNKHFA
IVGSTGSGKSHTVAKILQEALIAKKGSYEGLNNSHIVIFDIHGEYKTAFPQANYIDIQNLVLPYWLLNSEELEELFIETE
ANDHNQRSAFQEAITSNKKLKSTLDPKLKAKLNYDSPSFFDLNEILIYFKNRNNEQKQKSNTIEWFDLKGEKFIFNEETN
HNLFSGILKPVDGATTGTQNARFINFINRLEIKLNDKRLDFLLGDASKKITFIDTIKQFIGYPCKVQNEEGVINKEKSNI
TIIDLGGIPFEVLSITVSLISRMLFEFGYHSTKLASHEDDCEVPLLLVYEEAHKYVPKSDLVKFRASKNAIERIAKEGRK
YGVTLSIVSQRPSEISDTIFSQCNNFVTMRLTNPEDQNYVKKLLPDTLGNLTDSLSTLQSGEALIIGEAIALPSLVKINR
CEPEPKSSDIKYFEIWKDPWIDAEIQKVIGLWQK

Sequences:

>Translated_594_residues
MTSDNFKIVSVSSSFIKIEVIDPSLFENQFNIGSYIKIPYKNIENKYVVGVIENYNIKDNNISKGDGIEETISNGPSFVL
EVKLTGTMTKFNDSDLFERGGHGIPLPPNNGIELLNEKELNNIYSGKLVENDKFCFSKLVQNVEIDVPVSGNKFFNKHFA
IVGSTGSGKSHTVAKILQEALIAKKGSYEGLNNSHIVIFDIHGEYKTAFPQANYIDIQNLVLPYWLLNSEELEELFIETE
ANDHNQRSAFQEAITSNKKLKSTLDPKLKAKLNYDSPSFFDLNEILIYFKNRNNEQKQKSNTIEWFDLKGEKFIFNEETN
HNLFSGILKPVDGATTGTQNARFINFINRLEIKLNDKRLDFLLGDASKKITFIDTIKQFIGYPCKVQNEEGVINKEKSNI
TIIDLGGIPFEVLSITVSLISRMLFEFGYHSTKLASHEDDCEVPLLLVYEEAHKYVPKSDLVKFRASKNAIERIAKEGRK
YGVTLSIVSQRPSEISDTIFSQCNNFVTMRLTNPEDQNYVKKLLPDTLGNLTDSLSTLQSGEALIIGEAIALPSLVKINR
CEPEPKSSDIKYFEIWKDPWIDAEIQKVIGLWQK
>Mature_593_residues
TSDNFKIVSVSSSFIKIEVIDPSLFENQFNIGSYIKIPYKNIENKYVVGVIENYNIKDNNISKGDGIEETISNGPSFVLE
VKLTGTMTKFNDSDLFERGGHGIPLPPNNGIELLNEKELNNIYSGKLVENDKFCFSKLVQNVEIDVPVSGNKFFNKHFAI
VGSTGSGKSHTVAKILQEALIAKKGSYEGLNNSHIVIFDIHGEYKTAFPQANYIDIQNLVLPYWLLNSEELEELFIETEA
NDHNQRSAFQEAITSNKKLKSTLDPKLKAKLNYDSPSFFDLNEILIYFKNRNNEQKQKSNTIEWFDLKGEKFIFNEETNH
NLFSGILKPVDGATTGTQNARFINFINRLEIKLNDKRLDFLLGDASKKITFIDTIKQFIGYPCKVQNEEGVINKEKSNIT
IIDLGGIPFEVLSITVSLISRMLFEFGYHSTKLASHEDDCEVPLLLVYEEAHKYVPKSDLVKFRASKNAIERIAKEGRKY
GVTLSIVSQRPSEISDTIFSQCNNFVTMRLTNPEDQNYVKKLLPDTLGNLTDSLSTLQSGEALIIGEAIALPSLVKINRC
EPEPKSSDIKYFEIWKDPWIDAEIQKVIGLWQK

Specific function: Unknown

COG id: COG0433

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJECL08 and MJ1565 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002789
- InterPro:   IPR018538 [H]

Pfam domain/function: PF01935 DUF87; PF09378 HAS-barrel [H]

EC number: NA

Molecular weight: Translated: 67283; Mature: 67152

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSDNFKIVSVSSSFIKIEVIDPSLFENQFNIGSYIKIPYKNIENKYVVGVIENYNIKDN
CCCCCEEEEEECCCEEEEEEECCHHHCCCCCCCCEEEECCCCCCCEEEEEEEECCCCCCC
NISKGDGIEETISNGPSFVLEVKLTGTMTKFNDSDLFERGGHGIPLPPNNGIELLNEKEL
CCCCCCCHHHHHCCCCCEEEEEEEEEEEEECCCCHHHHCCCCCCCCCCCCCCEECCHHHH
NNIYSGKLVENDKFCFSKLVQNVEIDVPVSGNKFFNKHFAIVGSTGSGKSHTVAKILQEA
CCCCCCEEECCCHHHHHHHHHCCEEEEECCCCCEECEEEEEEECCCCCCCHHHHHHHHHH
LIAKKGSYEGLNNSHIVIFDIHGEYKTAFPQANYIDIQNLVLPYWLLNSEELEELFIETE
HHHCCCCCCCCCCCEEEEEEECCCCEECCCCCCCEEHHHHHHHHEECCHHHHHHHHEECC
ANDHNQRSAFQEAITSNKKLKSTLDPKLKAKLNYDSPSFFDLNEILIYFKNRNNEQKQKS
CCCCHHHHHHHHHHHCCCHHHHHCCCCEEEEECCCCCCCEEHHHEEEEEECCCCHHHHHC
NTIEWFDLKGEKFIFNEETNHNLFSGILKPVDGATTGTQNARFINFINRLEIKLNDKRLD
CCEEEEECCCCEEEECCCCCCHHHHHHHCCCCCCCCCCCCCHHHEEEEEEEEEECCCEEE
FLLGDASKKITFIDTIKQFIGYPCKVQNEEGVINKEKSNITIIDLGGIPFEVLSITVSLI
EEECCCCCCEEHHHHHHHHHCCCEEECCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHH
SRMLFEFGYHSTKLASHEDDCEVPLLLVYEEAHKYVPKSDLVKFRASKNAIERIAKEGRK
HHHHHHHCCCCCCCCCCCCCCCCCEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
YGVTLSIVSQRPSEISDTIFSQCNNFVTMRLTNPEDQNYVKKLLPDTLGNLTDSLSTLQS
EEEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHC
GEALIIGEAIALPSLVKINRCEPEPKSSDIKYFEIWKDPWIDAEIQKVIGLWQK
CCEEEEECHHHCCCCEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
TSDNFKIVSVSSSFIKIEVIDPSLFENQFNIGSYIKIPYKNIENKYVVGVIENYNIKDN
CCCCEEEEEECCCEEEEEEECCHHHCCCCCCCCEEEECCCCCCCEEEEEEEECCCCCCC
NISKGDGIEETISNGPSFVLEVKLTGTMTKFNDSDLFERGGHGIPLPPNNGIELLNEKEL
CCCCCCCHHHHHCCCCCEEEEEEEEEEEEECCCCHHHHCCCCCCCCCCCCCCEECCHHHH
NNIYSGKLVENDKFCFSKLVQNVEIDVPVSGNKFFNKHFAIVGSTGSGKSHTVAKILQEA
CCCCCCEEECCCHHHHHHHHHCCEEEEECCCCCEECEEEEEEECCCCCCCHHHHHHHHHH
LIAKKGSYEGLNNSHIVIFDIHGEYKTAFPQANYIDIQNLVLPYWLLNSEELEELFIETE
HHHCCCCCCCCCCCEEEEEEECCCCEECCCCCCCEEHHHHHHHHEECCHHHHHHHHEECC
ANDHNQRSAFQEAITSNKKLKSTLDPKLKAKLNYDSPSFFDLNEILIYFKNRNNEQKQKS
CCCCHHHHHHHHHHHCCCHHHHHCCCCEEEEECCCCCCCEEHHHEEEEEECCCCHHHHHC
NTIEWFDLKGEKFIFNEETNHNLFSGILKPVDGATTGTQNARFINFINRLEIKLNDKRLD
CCEEEEECCCCEEEECCCCCCHHHHHHHCCCCCCCCCCCCCHHHEEEEEEEEEECCCEEE
FLLGDASKKITFIDTIKQFIGYPCKVQNEEGVINKEKSNITIIDLGGIPFEVLSITVSLI
EEECCCCCCEEHHHHHHHHHCCCEEECCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHH
SRMLFEFGYHSTKLASHEDDCEVPLLLVYEEAHKYVPKSDLVKFRASKNAIERIAKEGRK
HHHHHHHCCCCCCCCCCCCCCCCCEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
YGVTLSIVSQRPSEISDTIFSQCNNFVTMRLTNPEDQNYVKKLLPDTLGNLTDSLSTLQS
EEEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHC
GEALIIGEAIALPSLVKINRCEPEPKSSDIKYFEIWKDPWIDAEIQKVIGLWQK
CCEEEEECHHHCCCCEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]