| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301380
Identifier: 146301380
GI number: 146301380
Start: 4331814
End: 4332449
Strand: Reverse
Name: 146301380
Synonym: Fjoh_3638
Alternate gene names: NA
Gene position: 4332449-4331814 (Counterclockwise)
Preceding gene: 146301381
Following gene: 146301379
Centisome position: 71.06
GC content: 27.04
Gene sequence:
>636_bases ATGAGAAATTACGAAATAAAAGAAAAATTACTTTCCAAATTAGAGGTTGTATTATCGCAATACAATTACAAACTGAAGAA AAGTGCCGATGAGTTTATCCATAAAAATAAAGACGGATGGTTTAAGTTTCAACTTATTTTTTTAGAGAGAGATGATGATT GGGAAATAAATTTGGGAATGCTTATTAGAATTGACAATATTGAAAACATTTATCATAAAGGCTCGTATTTTGAACCTAAA TATCATAAAACTACACCTACAATTGGAATCACGGTTGAAAATTACATTAATGATGGAAATGAATATCGTTTTGATTTAAT AAAATCTCAAGATGTAGAGACTTGTTTCAACGGTATATTTGAGCTTTTTAAAGAAGTCGCAATACCATTTTTTGAAAAAT ATAAAAGTATAAATGAAATTGAGAAAGCAATAAATGTAAAAGAAGGAAACAGTATTTTTTCTGGGATAAAATACGAAGGT AACCTCGGAATAATACTAGCTAAGCTTGTTAATAATCCTGATTATGAATTTTTTAAAGCAAAATATTTGAAATATTACAC AGAGGATTATGACGGATTTTATTTGGAAGAATATCTAAATATCATCAAGGTTCTAGATTCTATAGTCCTTCAATAA
Upstream 100 bases:
>100_bases AGGTACAGTCGTCGGAAATAAAGGAGCGGCACATGGTTATCCTGCTGGTACAAAGATACCGCCGACAAAAGTAGATATTA TAAGACCTAAGTAAAGAGAA
Downstream 100 bases:
>100_bases ATTTTCACATGTAAATAAGGGATGTGCAAACTAAAAATGTAGACAAAGTTAAGGGTGTATTTTTGCACCCTTATCTTTTT TGATTACAGTAACAAAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MRNYEIKEKLLSKLEVVLSQYNYKLKKSADEFIHKNKDGWFKFQLIFLERDDDWEINLGMLIRIDNIENIYHKGSYFEPK YHKTTPTIGITVENYINDGNEYRFDLIKSQDVETCFNGIFELFKEVAIPFFEKYKSINEIEKAINVKEGNSIFSGIKYEG NLGIILAKLVNNPDYEFFKAKYLKYYTEDYDGFYLEEYLNIIKVLDSIVLQ
Sequences:
>Translated_211_residues MRNYEIKEKLLSKLEVVLSQYNYKLKKSADEFIHKNKDGWFKFQLIFLERDDDWEINLGMLIRIDNIENIYHKGSYFEPK YHKTTPTIGITVENYINDGNEYRFDLIKSQDVETCFNGIFELFKEVAIPFFEKYKSINEIEKAINVKEGNSIFSGIKYEG NLGIILAKLVNNPDYEFFKAKYLKYYTEDYDGFYLEEYLNIIKVLDSIVLQ >Mature_211_residues MRNYEIKEKLLSKLEVVLSQYNYKLKKSADEFIHKNKDGWFKFQLIFLERDDDWEINLGMLIRIDNIENIYHKGSYFEPK YHKTTPTIGITVENYINDGNEYRFDLIKSQDVETCFNGIFELFKEVAIPFFEKYKSINEIEKAINVKEGNSIFSGIKYEG NLGIILAKLVNNPDYEFFKAKYLKYYTEDYDGFYLEEYLNIIKVLDSIVLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25159; Mature: 25159
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNYEIKEKLLSKLEVVLSQYNYKLKKSADEFIHKNKDGWFKFQLIFLERDDDWEINLGM CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCEEEEEE LIRIDNIENIYHKGSYFEPKYHKTTPTIGITVENYINDGNEYRFDLIKSQDVETCFNGIF EEEECCHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHCCCCCEEEEEECCCCHHHHHHHHH ELFKEVAIPFFEKYKSINEIEKAINVKEGNSIFSGIKYEGNLGIILAKLVNNPDYEFFKA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCEEECCCCCEEEEEHHCCCCHHHHHH KYLKYYTEDYDGFYLEEYLNIIKVLDSIVLQ HHHHHHHCCCCCEEHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRNYEIKEKLLSKLEVVLSQYNYKLKKSADEFIHKNKDGWFKFQLIFLERDDDWEINLGM CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCEEEEEE LIRIDNIENIYHKGSYFEPKYHKTTPTIGITVENYINDGNEYRFDLIKSQDVETCFNGIF EEEECCHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHCCCCCEEEEEECCCCHHHHHHHHH ELFKEVAIPFFEKYKSINEIEKAINVKEGNSIFSGIKYEGNLGIILAKLVNNPDYEFFKA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCEEECCCCCEEEEEHHCCCCHHHHHH KYLKYYTEDYDGFYLEEYLNIIKVLDSIVLQ HHHHHHHCCCCCEEHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA