Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146301381

Identifier: 146301381

GI number: 146301381

Start: 4332456

End: 4333184

Strand: Reverse

Name: 146301381

Synonym: Fjoh_3639

Alternate gene names: NA

Gene position: 4333184-4332456 (Counterclockwise)

Preceding gene: 146301382

Following gene: 146301380

Centisome position: 71.07

GC content: 37.59

Gene sequence:

>729_bases
TTGAAGTTTACTTTTGATGACAGTCAAGTTGATGAAGACGATGACGATGAAGTTTTAGAAGCAATAATTACAAAAATTGA
TACTGGAGGAGGGATTTATAATCCAGATAATCTAAATCCTTATGGCTACGGTTATGATAATCCAGTAAGTTTTGCTGACC
CAGATGGGAGATGCCCTATTTGTCCATTTATTCCACTTGCCATGTTACTCTTTGCTTCCGAACCTGCTATGGCACCCACG
AAAGACCATGCTGGTGATTCAAGAAAAATGTCAGAAGCAAAAGAAGCAAAAGGTGCTATGATATTGTCGACAATTCCAAT
AGCTAGAGGTGCTTCAGCTCTTAACAAGCTCTCAAATGCTACTAAAGGAAAATCAACGATAAAAGAAAATGCAGAAAAAG
GCAAGAAATGGGAGAAAGAAGTAACAAAACAATTAAAAGAAGAAGGGCACGATAATGTAAGTGAGCAGATTACTGTTAGT
CCTAATGATGGAAAAGGTGGCACTACACCAAATGTTCGAGTGGATAACATGAGTAAAAAAGATGGTAAAATTAGACTTAC
TGATGCAAAGTCATCAAAAACGGCTGGTAATACAAAAAATCAAAAAGTTGGATATCCAGCACTTGAAAAACATGGAGGTA
CAGTCGTCGGAAATAAAGGAGCGGCACATGGTTATCCTGCTGGTACAAAGATACCGCCGACAAAAGTAGATATTATAAGA
CCTAAGTAA

Upstream 100 bases:

>100_bases
GTTCCAAGACGAGCTGGGACTGGGACTTTATGATTATGGTTGGAGAAATTACGACCCTGCAATTGGAAGATGGATAAATC
CTGACCCACTTTTAAATGAT

Downstream 100 bases:

>100_bases
AGAGAAATGAGAAATTACGAAATAAAAGAAAAATTACTTTCCAAATTAGAGGTTGTATTATCGCAATACAATTACAAACT
GAAGAAAAGTGCCGATGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MKFTFDDSQVDEDDDDEVLEAIITKIDTGGGIYNPDNLNPYGYGYDNPVSFADPDGRCPICPFIPLAMLLFASEPAMAPT
KDHAGDSRKMSEAKEAKGAMILSTIPIARGASALNKLSNATKGKSTIKENAEKGKKWEKEVTKQLKEEGHDNVSEQITVS
PNDGKGGTTPNVRVDNMSKKDGKIRLTDAKSSKTAGNTKNQKVGYPALEKHGGTVVGNKGAAHGYPAGTKIPPTKVDIIR
PK

Sequences:

>Translated_242_residues
MKFTFDDSQVDEDDDDEVLEAIITKIDTGGGIYNPDNLNPYGYGYDNPVSFADPDGRCPICPFIPLAMLLFASEPAMAPT
KDHAGDSRKMSEAKEAKGAMILSTIPIARGASALNKLSNATKGKSTIKENAEKGKKWEKEVTKQLKEEGHDNVSEQITVS
PNDGKGGTTPNVRVDNMSKKDGKIRLTDAKSSKTAGNTKNQKVGYPALEKHGGTVVGNKGAAHGYPAGTKIPPTKVDIIR
PK
>Mature_242_residues
MKFTFDDSQVDEDDDDEVLEAIITKIDTGGGIYNPDNLNPYGYGYDNPVSFADPDGRCPICPFIPLAMLLFASEPAMAPT
KDHAGDSRKMSEAKEAKGAMILSTIPIARGASALNKLSNATKGKSTIKENAEKGKKWEKEVTKQLKEEGHDNVSEQITVS
PNDGKGGTTPNVRVDNMSKKDGKIRLTDAKSSKTAGNTKNQKVGYPALEKHGGTVVGNKGAAHGYPAGTKIPPTKVDIIR
PK

Specific function: Unknown

COG id: COG3210

COG function: function code U; Large exoproteins involved in heme utilization or adhesion

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25917; Mature: 25917

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFTFDDSQVDEDDDDEVLEAIITKIDTGGGIYNPDNLNPYGYGYDNPVSFADPDGRCPI
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CPFIPLAMLLFASEPAMAPTKDHAGDSRKMSEAKEAKGAMILSTIPIARGASALNKLSNA
CHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHH
TKGKSTIKENAEKGKKWEKEVTKQLKEEGHDNVSEQITVSPNDGKGGTTPNVRVDNMSKK
HCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCEEECCCCCC
DGKIRLTDAKSSKTAGNTKNQKVGYPALEKHGGTVVGNKGAAHGYPAGTKIPPTKVDIIR
CCEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCEEEECCCCCCCCCCCCCCCCCCEEEEC
PK
CC
>Mature Secondary Structure
MKFTFDDSQVDEDDDDEVLEAIITKIDTGGGIYNPDNLNPYGYGYDNPVSFADPDGRCPI
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CPFIPLAMLLFASEPAMAPTKDHAGDSRKMSEAKEAKGAMILSTIPIARGASALNKLSNA
CHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHH
TKGKSTIKENAEKGKKWEKEVTKQLKEEGHDNVSEQITVSPNDGKGGTTPNVRVDNMSKK
HCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCEEECCCCCC
DGKIRLTDAKSSKTAGNTKNQKVGYPALEKHGGTVVGNKGAAHGYPAGTKIPPTKVDIIR
CCEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCEEEECCCCCCCCCCCCCCCCCCEEEEC
PK
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA