| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301368
Identifier: 146301368
GI number: 146301368
Start: 4321646
End: 4322482
Strand: Reverse
Name: 146301368
Synonym: Fjoh_3626
Alternate gene names: NA
Gene position: 4322482-4321646 (Counterclockwise)
Preceding gene: 146301369
Following gene: 146301367
Centisome position: 70.9
GC content: 34.05
Gene sequence:
>837_bases ATGTATTATAATATTTTAACACAGAAAGACCATCCCAAATATAGGGCAGTCAAGAAAACAGTGAAACTCTTGGTAGAGTT TGTAGAAGCTGAGTGTGTTTACTTTTCGGATTCTGCTATAGAATCAAAAATAGGGATTCTGACAATTGTTGTGAGCAAAA AAAGCCCCCATTACTATGATGATGTTGTCTTCCATTTATGGAAAGTAATTGAAAACTACAATAATTTTTCATTCTGTTTT TTTGACAGGGAGTGTATAAAGAGAGAAGTGGGAAAAGGAAATTTATTTTTTATTTTCAATTGTAAAGAAACGGATCTTGT GTATAGAAACACTGAAGGGAAAACTGTTCTGGATATAAAAAAATTAAATATGAAACGGCTTTTGAAAAAGACTGTTGCAA ATTATCAAATGTGGATATCAGAGGCCAATACTATTGGCAGAGACTTAAAATACCACCGTGGAAACGAGAATCATTTAATG GCATTGTATGTTATACATGAGCAGTTTCGATATCTCTTTATTAACGCTTCATGGGTTCTAACGGGTGAATGGGTGATAGA TGGAAACATTTCAGACCAGCAGGAGCGCATTGCGAAGTTTAATAGTGTCTTAGGCAACACTTTTGATTTAGAAAACAAAG AAGAGAAAGAAGTTTTAAGAAAGCTTGATCTTGCCCGAAAAGCTGTTCAGTGGGGAGAAGAAATTGAACCATTAACTGCA GAAATTGTTGAATCAGCATATGAAAAAATGCAGTGGCTGATGAGTGAAGTAAAAACAATGTATCAGCAGTATGCTGAGCA AACCAAACAAATATTTAAAGAATATGGAAACCAATGA
Upstream 100 bases:
>100_bases ATCGATACAATGATTTTGCTGGTTTTTGCACAGCTGTTGTAAAAGATGAATTAGGACGCACTGAGAATCTGATTTCGGCT GAACTTTAAACAGACAGATC
Downstream 100 bases:
>100_bases TAATAAAAAGGCGGATGATTTTATCAAAGAACTGAAAAGCAGTTTTTATTTTAGAACACTGACCCCGCAGAGAGAGAAAG AAGGTATTTATCATGCAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MYYNILTQKDHPKYRAVKKTVKLLVEFVEAECVYFSDSAIESKIGILTIVVSKKSPHYYDDVVFHLWKVIENYNNFSFCF FDRECIKREVGKGNLFFIFNCKETDLVYRNTEGKTVLDIKKLNMKRLLKKTVANYQMWISEANTIGRDLKYHRGNENHLM ALYVIHEQFRYLFINASWVLTGEWVIDGNISDQQERIAKFNSVLGNTFDLENKEEKEVLRKLDLARKAVQWGEEIEPLTA EIVESAYEKMQWLMSEVKTMYQQYAEQTKQIFKEYGNQ
Sequences:
>Translated_278_residues MYYNILTQKDHPKYRAVKKTVKLLVEFVEAECVYFSDSAIESKIGILTIVVSKKSPHYYDDVVFHLWKVIENYNNFSFCF FDRECIKREVGKGNLFFIFNCKETDLVYRNTEGKTVLDIKKLNMKRLLKKTVANYQMWISEANTIGRDLKYHRGNENHLM ALYVIHEQFRYLFINASWVLTGEWVIDGNISDQQERIAKFNSVLGNTFDLENKEEKEVLRKLDLARKAVQWGEEIEPLTA EIVESAYEKMQWLMSEVKTMYQQYAEQTKQIFKEYGNQ >Mature_278_residues MYYNILTQKDHPKYRAVKKTVKLLVEFVEAECVYFSDSAIESKIGILTIVVSKKSPHYYDDVVFHLWKVIENYNNFSFCF FDRECIKREVGKGNLFFIFNCKETDLVYRNTEGKTVLDIKKLNMKRLLKKTVANYQMWISEANTIGRDLKYHRGNENHLM ALYVIHEQFRYLFINASWVLTGEWVIDGNISDQQERIAKFNSVLGNTFDLENKEEKEVLRKLDLARKAVQWGEEIEPLTA EIVESAYEKMQWLMSEVKTMYQQYAEQTKQIFKEYGNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33009; Mature: 33009
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYYNILTQKDHPKYRAVKKTVKLLVEFVEAECVYFSDSAIESKIGILTIVVSKKSPHYYD CEEEECCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCHHHHHCCCEEEEEEECCCCCHHH DVVFHLWKVIENYNNFSFCFFDRECIKREVGKGNLFFIFNCKETDLVYRNTEGKTVLDIK HHHHHHHHHHHCCCCCEEEEECHHHHHHHCCCCCEEEEEECCCCCEEEECCCCCEEEHHH KLNMKRLLKKTVANYQMWISEANTIGRDLKYHRGNENHLMALYVIHEQFRYLFINASWVL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCEEEEEEEECCEEEEEEEEEEEE TGEWVIDGNISDQQERIAKFNSVLGNTFDLENKEEKEVLRKLDLARKAVQWGEEIEPLTA EEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHH EIVESAYEKMQWLMSEVKTMYQQYAEQTKQIFKEYGNQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MYYNILTQKDHPKYRAVKKTVKLLVEFVEAECVYFSDSAIESKIGILTIVVSKKSPHYYD CEEEECCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCHHHHHCCCEEEEEEECCCCCHHH DVVFHLWKVIENYNNFSFCFFDRECIKREVGKGNLFFIFNCKETDLVYRNTEGKTVLDIK HHHHHHHHHHHCCCCCEEEEECHHHHHHHCCCCCEEEEEECCCCCEEEECCCCCEEEHHH KLNMKRLLKKTVANYQMWISEANTIGRDLKYHRGNENHLMALYVIHEQFRYLFINASWVL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCEEEEEEEECCEEEEEEEEEEEE TGEWVIDGNISDQQERIAKFNSVLGNTFDLENKEEKEVLRKLDLARKAVQWGEEIEPLTA EEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHH EIVESAYEKMQWLMSEVKTMYQQYAEQTKQIFKEYGNQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA