| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301369
Identifier: 146301369
GI number: 146301369
Start: 4322494
End: 4324131
Strand: Reverse
Name: 146301369
Synonym: Fjoh_3627
Alternate gene names: NA
Gene position: 4324131-4322494 (Counterclockwise)
Preceding gene: 146301373
Following gene: 146301368
Centisome position: 70.92
GC content: 36.57
Gene sequence:
>1638_bases ATGAGTAGTGCAATTCAATTTCAAGATCAGAAAGAATTGGAGAATGCCGTTAGAGAGCTCCAATCATTTATGGACATTAC AGCGGTCACCCTGCATGAGGCAGAGACCGCAGGTAAAAGAGGTTATATACTTACTATAATCTTAAGGGAAGATTCACAGC AGATTGCATCGGAAATGTATGACTGGGCGGATAAGGTTTTAAAAAAGTATCCGTCCGTTCCTTATGTAATTATAAATCTA TGGGATGTACTGCATCGCTTAAAGCATGGGAGCTTGTATTATTTAAAGTGGTATTTATCAAACATAAGTCTGTTTAAAAA CGAGGAGTTTGGTTTTAAGATTACAAAAGATATTCCCTCTGTATCCGTTCTGCTAAAAAAAGCAGTAAAGAAAAACAGCG GGCTTTTAGCCAAAGCAGAATCATTAAGAAGAGGTTCCCAGCATTATGAGGGAACAAATAACCATCATATGGCAATCTAT ACAATCCATCAGGCGGTCAACCTTCTTTTTGGTATAATCGGAGAACTTGTCATGGGAAAATCTCATTCGAATCATTATAC ACTAGAGCACTTAAATACGATAAAGGATTATGCACCTATTTTGAAACAGGTGTTCAATACTGATCATGATAAGGATAGAG AAATTGCCGATTTACTTGATAGAGCAAGGATTGAATTCCCTTATGGAGGCAAAACAAAAATTAAGAAAGACAGGGTTAAA GATGCACAGAAGAAACTTTACCGCATCTTAAAAGAAACTAAGAAAATCTTCCAAGACCAGCTTTCTTACTGCGAGGAAAA ATCCGTTTTTTTTATTGAACCAAAACAGAATCCAGAAATTTTAAACGATGGTGTCATCGACTATGAGAAAATTGTCAGTG ATACCGTTACGTCTTATCTTAAGACCGAGGCAGTTTATTGTTTTGGAACAGCGGAAAAAAGGGTTAAACATTTTTATCTA TTAGTACTTTTCAAAGAAAGTAAAGTAAATGCAGTGCATGATCTGGCTGATATGATTAAAAGCAGAACCAAAGAGCAGTG CACAGCAACACTTTTGATTCATCATATTTCAGAGCTTAAGAGCGCAACAGGCGATCAGAAATATTTCTTTTTGAATGTTA TAAAAAATGGAAAGGCTTTATTTAAAAAAGAATCTGTTGCTTTAGAATTTGGAGATCTTCCAGTTCGCAGTATAACATCA GCAAAAGAATACCTCTGCTATAGAAATATTGTGGTAAACTACATGGAAAGCTGGCAGGGAGATTATGAATGGGCGTGTTA TGCTCCTCTTAAAGGTCTGATGCTCCATACTATGGCAGAACAGATCTGTCTTGGGATGATCCGTTTGTTTATGGGGTATT CTCCAAATCATTTTTCCCTTTCTTATCTATTAGAAATCTGTGATTATTTTAACCCTGAAATAAGCACTTACTTCCCGCGG GTTACAGAGCAGGACAGAAACTTGTTTACGATATTAAGCAGATCATATGCTTCACTGAGATACAGCGGTGCAGATACTTT TTCTGAACTCGATATGAATCTTTTGCAGGATCGATACAATGATTTTGCTGGTTTTTGCACAGCTGTTGTAAAAGATGAAT TAGGACGCACTGAGAATCTGATTTCGGCTGAACTTTAA
Upstream 100 bases:
>100_bases TACAAATTGATACGGTACAGTACGACTAATCACTTACTTGCTCGTGTGTTAAACAAAAATACAATTTTTCACACAAGTAT TAATTAAAAAAATTAAAATT
Downstream 100 bases:
>100_bases ACAGACAGATCATGTATTATAATATTTTAACACAGAAAGACCATCCCAAATATAGGGCAGTCAAGAAAACAGTGAAACTC TTGGTAGAGTTTGTAGAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 545; Mature: 544
Protein sequence:
>545_residues MSSAIQFQDQKELENAVRELQSFMDITAVTLHEAETAGKRGYILTIILREDSQQIASEMYDWADKVLKKYPSVPYVIINL WDVLHRLKHGSLYYLKWYLSNISLFKNEEFGFKITKDIPSVSVLLKKAVKKNSGLLAKAESLRRGSQHYEGTNNHHMAIY TIHQAVNLLFGIIGELVMGKSHSNHYTLEHLNTIKDYAPILKQVFNTDHDKDREIADLLDRARIEFPYGGKTKIKKDRVK DAQKKLYRILKETKKIFQDQLSYCEEKSVFFIEPKQNPEILNDGVIDYEKIVSDTVTSYLKTEAVYCFGTAEKRVKHFYL LVLFKESKVNAVHDLADMIKSRTKEQCTATLLIHHISELKSATGDQKYFFLNVIKNGKALFKKESVALEFGDLPVRSITS AKEYLCYRNIVVNYMESWQGDYEWACYAPLKGLMLHTMAEQICLGMIRLFMGYSPNHFSLSYLLEICDYFNPEISTYFPR VTEQDRNLFTILSRSYASLRYSGADTFSELDMNLLQDRYNDFAGFCTAVVKDELGRTENLISAEL
Sequences:
>Translated_545_residues MSSAIQFQDQKELENAVRELQSFMDITAVTLHEAETAGKRGYILTIILREDSQQIASEMYDWADKVLKKYPSVPYVIINL WDVLHRLKHGSLYYLKWYLSNISLFKNEEFGFKITKDIPSVSVLLKKAVKKNSGLLAKAESLRRGSQHYEGTNNHHMAIY TIHQAVNLLFGIIGELVMGKSHSNHYTLEHLNTIKDYAPILKQVFNTDHDKDREIADLLDRARIEFPYGGKTKIKKDRVK DAQKKLYRILKETKKIFQDQLSYCEEKSVFFIEPKQNPEILNDGVIDYEKIVSDTVTSYLKTEAVYCFGTAEKRVKHFYL LVLFKESKVNAVHDLADMIKSRTKEQCTATLLIHHISELKSATGDQKYFFLNVIKNGKALFKKESVALEFGDLPVRSITS AKEYLCYRNIVVNYMESWQGDYEWACYAPLKGLMLHTMAEQICLGMIRLFMGYSPNHFSLSYLLEICDYFNPEISTYFPR VTEQDRNLFTILSRSYASLRYSGADTFSELDMNLLQDRYNDFAGFCTAVVKDELGRTENLISAEL >Mature_544_residues SSAIQFQDQKELENAVRELQSFMDITAVTLHEAETAGKRGYILTIILREDSQQIASEMYDWADKVLKKYPSVPYVIINLW DVLHRLKHGSLYYLKWYLSNISLFKNEEFGFKITKDIPSVSVLLKKAVKKNSGLLAKAESLRRGSQHYEGTNNHHMAIYT IHQAVNLLFGIIGELVMGKSHSNHYTLEHLNTIKDYAPILKQVFNTDHDKDREIADLLDRARIEFPYGGKTKIKKDRVKD AQKKLYRILKETKKIFQDQLSYCEEKSVFFIEPKQNPEILNDGVIDYEKIVSDTVTSYLKTEAVYCFGTAEKRVKHFYLL VLFKESKVNAVHDLADMIKSRTKEQCTATLLIHHISELKSATGDQKYFFLNVIKNGKALFKKESVALEFGDLPVRSITSA KEYLCYRNIVVNYMESWQGDYEWACYAPLKGLMLHTMAEQICLGMIRLFMGYSPNHFSLSYLLEICDYFNPEISTYFPRV TEQDRNLFTILSRSYASLRYSGADTFSELDMNLLQDRYNDFAGFCTAVVKDELGRTENLISAEL
Specific function: Unknown
COG id: COG1708
COG function: function code R; Predicted nucleotidyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63014; Mature: 62883
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSAIQFQDQKELENAVRELQSFMDITAVTLHEAETAGKRGYILTIILREDSQQIASEMY CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHH DWADKVLKKYPSVPYVIINLWDVLHRLKHGSLYYLKWYLSNISLFKNEEFGFKITKDIPS HHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCEEEEHHHHHHHHHEECCCCCEEEECCCCH VSVLLKKAVKKNSGLLAKAESLRRGSQHYEGTNNHHMAIYTIHQAVNLLFGIIGELVMGK HHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCC SHSNHYTLEHLNTIKDYAPILKQVFNTDHDKDREIADLLDRARIEFPYGGKTKIKKDRVK CCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEECCCCCCCCCCHHHHHH DAQKKLYRILKETKKIFQDQLSYCEEKSVFFIEPKQNPEILNDGVIDYEKIVSDTVTSYL HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHCCCCCHHHHHHHHHHHHHH KTEAVYCFGTAEKRVKHFYLLVLFKESKVNAVHDLADMIKSRTKEQCTATLLIHHISELK HHCCEEEECCHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SATGDQKYFFLNVIKNGKALFKKESVALEFGDLPVRSITSAKEYLCYRNIVVNYMESWQG HCCCCCCEEEEEEHHCCHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCC DYEWACYAPLKGLMLHTMAEQICLGMIRLFMGYSPNHFSLSYLLEICDYFNPEISTYFPR CCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHCCC VTEQDRNLFTILSRSYASLRYSGADTFSELDMNLLQDRYNDFAGFCTAVVKDELGRTENL CCCCCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH ISAEL HCCCC >Mature Secondary Structure SSAIQFQDQKELENAVRELQSFMDITAVTLHEAETAGKRGYILTIILREDSQQIASEMY CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHH DWADKVLKKYPSVPYVIINLWDVLHRLKHGSLYYLKWYLSNISLFKNEEFGFKITKDIPS HHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCEEEEHHHHHHHHHEECCCCCEEEECCCCH VSVLLKKAVKKNSGLLAKAESLRRGSQHYEGTNNHHMAIYTIHQAVNLLFGIIGELVMGK HHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCC SHSNHYTLEHLNTIKDYAPILKQVFNTDHDKDREIADLLDRARIEFPYGGKTKIKKDRVK CCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEECCCCCCCCCCHHHHHH DAQKKLYRILKETKKIFQDQLSYCEEKSVFFIEPKQNPEILNDGVIDYEKIVSDTVTSYL HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHCCCCCHHHHHHHHHHHHHH KTEAVYCFGTAEKRVKHFYLLVLFKESKVNAVHDLADMIKSRTKEQCTATLLIHHISELK HHCCEEEECCHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SATGDQKYFFLNVIKNGKALFKKESVALEFGDLPVRSITSAKEYLCYRNIVVNYMESWQG HCCCCCCEEEEEEHHCCHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCC DYEWACYAPLKGLMLHTMAEQICLGMIRLFMGYSPNHFSLSYLLEICDYFNPEISTYFPR CCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHCCC VTEQDRNLFTILSRSYASLRYSGADTFSELDMNLLQDRYNDFAGFCTAVVKDELGRTENL CCCCCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH ISAEL HCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA