| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301331
Identifier: 146301331
GI number: 146301331
Start: 4284324
End: 4284878
Strand: Reverse
Name: 146301331
Synonym: Fjoh_3589
Alternate gene names: NA
Gene position: 4284878-4284324 (Counterclockwise)
Preceding gene: 146301332
Following gene: 146301330
Centisome position: 70.28
GC content: 29.73
Gene sequence:
>555_bases ATGAATAGCATAAATCCAACAACATTAATTGCAATATATGGAGCCTTGATTTCAACAGTATTGTTAGCTTATCGCTACAT GGAACGTAAAGAACTGAAAAGAAATCTTTATGTTGACATCAGTAGCAGAGTAAAACGAAACGCTAATAATCAATTAATAA ATGAAAGACGTGGTGGTTGGTTTTTAGTTGTAACAATAACTAATAGTGCGAAAACTTCAACATATATTGATCGATATTTC TTTAAATCTTATAATCATCGTTTGATTCCTTCTCAATTTTGTGGTTTCGACTTTAAGCATGGAATAATTAACAGTGATAA AGACTTTCCAATAAAGTTAGAGCATGGTGAAAAATTCACAATTGAATATCCTTTGTCAAATAATCAAGGAATTGATGGAA ATGAAAATATGGAAAATATTCGAAAAATGTCGAAAACGTGTAAATATATGGAGGCATATTGTTCAGACACTCTAGAGAAA TGGCATCATGGAAGACCATTCAATATTGAAATGTTTTGTAAACATTTTGATTTAGTGGAAGAAAATCTTAGATAA
Upstream 100 bases:
>100_bases TAAACCTTCACGAATCTACCGATATTTGGACGTATAAGGTTTTTTTCGTCTATGTGCAGCTATGCATAATTTTACCAAAA ATACCAAAAAATAGACCTTT
Downstream 100 bases:
>100_bases AAAAACGAACGCACAACACTCGCTACAAGAGATTTGGGATTAGGTTGAATTTAAATATGTTTTTATACTTATAAAATTTG TGTAAAATGTAAAAATCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MNSINPTTLIAIYGALISTVLLAYRYMERKELKRNLYVDISSRVKRNANNQLINERRGGWFLVVTITNSAKTSTYIDRYF FKSYNHRLIPSQFCGFDFKHGIINSDKDFPIKLEHGEKFTIEYPLSNNQGIDGNENMENIRKMSKTCKYMEAYCSDTLEK WHHGRPFNIEMFCKHFDLVEENLR
Sequences:
>Translated_184_residues MNSINPTTLIAIYGALISTVLLAYRYMERKELKRNLYVDISSRVKRNANNQLINERRGGWFLVVTITNSAKTSTYIDRYF FKSYNHRLIPSQFCGFDFKHGIINSDKDFPIKLEHGEKFTIEYPLSNNQGIDGNENMENIRKMSKTCKYMEAYCSDTLEK WHHGRPFNIEMFCKHFDLVEENLR >Mature_184_residues MNSINPTTLIAIYGALISTVLLAYRYMERKELKRNLYVDISSRVKRNANNQLINERRGGWFLVVTITNSAKTSTYIDRYF FKSYNHRLIPSQFCGFDFKHGIINSDKDFPIKLEHGEKFTIEYPLSNNQGIDGNENMENIRKMSKTCKYMEAYCSDTLEK WHHGRPFNIEMFCKHFDLVEENLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21727; Mature: 21727
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSINPTTLIAIYGALISTVLLAYRYMERKELKRNLYVDISSRVKRNANNQLINERRGGW CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHCCCCHHHHHHCCCCE FLVVTITNSAKTSTYIDRYFFKSYNHRLIPSQFCGFDFKHGIINSDKDFPIKLEHGEKFT EEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEECCCEEE IEYPLSNNQGIDGNENMENIRKMSKTCKYMEAYCSDTLEKWHHGRPFNIEMFCKHFDLVE EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH ENLR HCCC >Mature Secondary Structure MNSINPTTLIAIYGALISTVLLAYRYMERKELKRNLYVDISSRVKRNANNQLINERRGGW CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHCCCCHHHHHHCCCCE FLVVTITNSAKTSTYIDRYFFKSYNHRLIPSQFCGFDFKHGIINSDKDFPIKLEHGEKFT EEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEECCCEEE IEYPLSNNQGIDGNENMENIRKMSKTCKYMEAYCSDTLEKWHHGRPFNIEMFCKHFDLVE EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH ENLR HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA