Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146301332

Identifier: 146301332

GI number: 146301332

Start: 4285411

End: 4285749

Strand: Reverse

Name: 146301332

Synonym: Fjoh_3590

Alternate gene names: NA

Gene position: 4285749-4285411 (Counterclockwise)

Preceding gene: 146301333

Following gene: 146301331

Centisome position: 70.29

GC content: 29.79

Gene sequence:

>339_bases
ATGGACATAAATAATATCTCCTTTGAACACCTGCCTAAGGCGGTATCATTCTTAGCGAAAGAAATTGCAGAAATTAAGTC
TTTGATTCAAAATGTGCAGATATATGAATCTAAAGAAAAAAGTATTCCCATTGATATTATAGAAGCAAGCCGGTTAATAG
GAAAAGCAAAGTCTACAATATATGCTCTTGTTAGGCAGAGAAAAATTCCTTGCTATAAATATGGTAAAAAGTTGTATTTT
TTTGAAGATGAACTTTTAGAATGGATCTCTAAATGGAAAAAGAAAACAATACAAGAAATCGAATCAGAAGCATTGAAATA
TAATCATAAGAATAGATAG

Upstream 100 bases:

>100_bases
GTTTTAAAAAATACTGTGTTTTTCAAGTGTTTTTGTTGTGAAATGGGACACAGCAAAAACACTTTTTTCATTTGTGCCAT
AACAATTAAAAGCGATAGGT

Downstream 100 bases:

>100_bases
ATAATAGCCGGCAAGGGGAGAGAAGGATTTCTATCAAGTGAGGTTGCTGCAGCTATATTGCCTTGAAATTGTACTTTTTT
ATTTTTTAAAATTCCTAATT

Product: DNA binding domain-containing protein

Products: NA

Alternate protein names: Excisionase In Mobilizable Transposon; Mobilizable Transposon Xis Protein; Mobilizable Transposon Protein Xis Protein; Excisionase In Mobilizable Transposon Xis Protein

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MDINNISFEHLPKAVSFLAKEIAEIKSLIQNVQIYESKEKSIPIDIIEASRLIGKAKSTIYALVRQRKIPCYKYGKKLYF
FEDELLEWISKWKKKTIQEIESEALKYNHKNR

Sequences:

>Translated_112_residues
MDINNISFEHLPKAVSFLAKEIAEIKSLIQNVQIYESKEKSIPIDIIEASRLIGKAKSTIYALVRQRKIPCYKYGKKLYF
FEDELLEWISKWKKKTIQEIESEALKYNHKNR
>Mature_112_residues
MDINNISFEHLPKAVSFLAKEIAEIKSLIQNVQIYESKEKSIPIDIIEASRLIGKAKSTIYALVRQRKIPCYKYGKKLYF
FEDELLEWISKWKKKTIQEIESEALKYNHKNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13264; Mature: 13264

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDINNISFEHLPKAVSFLAKEIAEIKSLIQNVQIYESKEKSIPIDIIEASRLIGKAKSTI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
YALVRQRKIPCYKYGKKLYFFEDELLEWISKWKKKTIQEIESEALKYNHKNR
HHHHHHHCCCHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDINNISFEHLPKAVSFLAKEIAEIKSLIQNVQIYESKEKSIPIDIIEASRLIGKAKSTI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
YALVRQRKIPCYKYGKKLYFFEDELLEWISKWKKKTIQEIESEALKYNHKNR
HHHHHHHCCCHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA