| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301245
Identifier: 146301245
GI number: 146301245
Start: 4177849
End: 4178343
Strand: Direct
Name: 146301245
Synonym: Fjoh_3503
Alternate gene names: NA
Gene position: 4177849-4178343 (Clockwise)
Preceding gene: 146301244
Following gene: 146301246
Centisome position: 68.52
GC content: 32.12
Gene sequence:
>495_bases ATGAAACAAATAGCTTTAATCTTTATTGCATTTATAACCTTTTCTTGCTCTCAGGCTCAGAAAACAAGTTTTTCTAAAGA GGCTTTATCAGAAAAATTATTAACCCTTGACGGAGGTCAGGTTACTTTTAAAAACATTTTAAAAAAATACAAAGGAAAAA CTTTAGTTATCGAAGTTTGGGCTTCCTGGTGCGGCGACTGTGTAAAAGCAATGCCAAAATTAAAAGAGTTACAAGCTAAC AATCCTGATGTTTCTTATTTATTCCTTTCTGCTGATAAAACAGCCGATAAATGGAAAGCTGGAATAGAAAAACACGAATT AAAAGGCGATCATTTTATGATGAACGACGGTATGAAAGGTGTTTTTGGAAAAGCAATTGACTTAGACTGGATTCCGAGAT ATATTGTTATTGACAAAACCGGAAAAATAGTTTTATATCGTGCTATCGAAACTGATTTCGACAAAATCAATGAAACACTT AAAAGCTTAAAATAA
Upstream 100 bases:
>100_bases AACGGCTGTTTTGTTACAAAACAAACGAGTCTTCAAATTTTGTTAATCTGCATTTGGCTTTCAATTTGTTTGTTTAACTT TGTTGAAAATCACTAATTCT
Downstream 100 bases:
>100_bases ATTTAAAATAACAGCAATTTTAAAATTGCTGTTATTTTAATCTACTTCATTCAAACAAAAAAATTAAAAGAATAACAAAA ACTACCAAAATGAGAAAATC
Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
Products: NA
Alternate protein names: Thioredoxin Family Protein; Thiol-Disulfide Oxidoreductase; Redoxin; ThiolDisulfide Oxidoreductase TlpA; Exported Thioredoxin; Thiol-Disulfide Isomerase And Thioredoxin
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MKQIALIFIAFITFSCSQAQKTSFSKEALSEKLLTLDGGQVTFKNILKKYKGKTLVIEVWASWCGDCVKAMPKLKELQAN NPDVSYLFLSADKTADKWKAGIEKHELKGDHFMMNDGMKGVFGKAIDLDWIPRYIVIDKTGKIVLYRAIETDFDKINETL KSLK
Sequences:
>Translated_164_residues MKQIALIFIAFITFSCSQAQKTSFSKEALSEKLLTLDGGQVTFKNILKKYKGKTLVIEVWASWCGDCVKAMPKLKELQAN NPDVSYLFLSADKTADKWKAGIEKHELKGDHFMMNDGMKGVFGKAIDLDWIPRYIVIDKTGKIVLYRAIETDFDKINETL KSLK >Mature_164_residues MKQIALIFIAFITFSCSQAQKTSFSKEALSEKLLTLDGGQVTFKNILKKYKGKTLVIEVWASWCGDCVKAMPKLKELQAN NPDVSYLFLSADKTADKWKAGIEKHELKGDHFMMNDGMKGVFGKAIDLDWIPRYIVIDKTGKIVLYRAIETDFDKINETL KSLK
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18590; Mature: 18590
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQIALIFIAFITFSCSQAQKTSFSKEALSEKLLTLDGGQVTFKNILKKYKGKTLVIEVW CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEECCCCEEHHHHHHHHHCCCEEEEHHH ASWCGDCVKAMPKLKELQANNPDVSYLFLSADKTADKWKAGIEKHELKGDHFMMNDGMKG HHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHCCHHHHCCCCEEEECCCCCC VFGKAIDLDWIPRYIVIDKTGKIVLYRAIETDFDKINETLKSLK HHCCCCCCCCCCCEEEEECCCCEEEEEEHHCCHHHHHHHHHHCC >Mature Secondary Structure MKQIALIFIAFITFSCSQAQKTSFSKEALSEKLLTLDGGQVTFKNILKKYKGKTLVIEVW CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEECCCCEEHHHHHHHHHCCCEEEEHHH ASWCGDCVKAMPKLKELQANNPDVSYLFLSADKTADKWKAGIEKHELKGDHFMMNDGMKG HHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHCCHHHHCCCCEEEECCCCCC VFGKAIDLDWIPRYIVIDKTGKIVLYRAIETDFDKINETLKSLK HHCCCCCCCCCCCEEEEECCCCEEEEEEHHCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA