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The map label for this gene is rprY [H]

Identifier: 146301202

GI number: 146301202

Start: 4126177

End: 4126893

Strand: Reverse

Name: rprY [H]

Synonym: Fjoh_3460

Alternate gene names: 146301202

Gene position: 4126893-4126177 (Counterclockwise)

Preceding gene: 146301203

Following gene: 146301201

Centisome position: 67.69

GC content: 28.73

Gene sequence:

>717_bases
ATGGAAAATACTAACAAAAGAATACTTTTAGTAGAAGATGACCTAAATTTTGGGGCGGTTCTTAAAGATTATCTAATGTT
AAATGACTTTGAAGTTACTTTAGCTAAAAACGGTATGGAAGGTTTCGAGAAATTCAAGAAAGATGTGTATGATTTATGTA
TTCTTGATGTAATGATGCCTTATAAAGATGGTTATACTTTGGCTAAAGAAATTAGAGAAAAAAATAGTGAAGTGCCTATT
ATATTTTTAACAGCAAAATCTATGAAAGAAGATGTGTTAAAAGGATACAAAGCAGGTGCTGATGATTATTTAAATAAACC
TTTTGATTCAGAGGTTTTATTAATGAAAATTAAAGCAATCATTCAAAGAAAATCTGCTGATACAAAAGCAGAACAAGTAC
AATTTGAATTTAACATTGGTAAATTCCACTTAAATTCAAAATTAAGATTCTTGACTTTCCAGGATGAAGAGCCAATAAAA
TTATCTCCAAAAGAAAATGAATTGCTTAAAATGCTTATTCTTCATGAGAATGATTTAATGCCAAGAGAATTAGCTTTAAC
CAAAATTTGGAGAGATGACAACTACTTTACTTCAAGAAGTATGGACGTTTACATCGCTAAACTTAGAAAATATCTAAAAT
CTGACGAAGATGTTGAAATCTTAAACATTCATGGAGAAGGTTTCAGATTAGTTGTAAAGAGCAAAGTTTCTGAATAA

Upstream 100 bases:

>100_bases
AAAAAGAATTGTCGAGGATCACAATGGACAAGTATATGTTGAAAGCGAAAAAGGAAAAGGTAGCACCTTTATAATAAAAA
TACCATTAATAAATTAAAAT

Downstream 100 bases:

>100_bases
TTAATTCACCTAAAAAATATAAGCCCTGAGAAATCAGGGCTTTTTTTTATGCCTAAAAAGTAAAAAGAAATTCAGCATAA
TCTTGTTTCGACTAAAAAGT

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MENTNKRILLVEDDLNFGAVLKDYLMLNDFEVTLAKNGMEGFEKFKKDVYDLCILDVMMPYKDGYTLAKEIREKNSEVPI
IFLTAKSMKEDVLKGYKAGADDYLNKPFDSEVLLMKIKAIIQRKSADTKAEQVQFEFNIGKFHLNSKLRFLTFQDEEPIK
LSPKENELLKMLILHENDLMPRELALTKIWRDDNYFTSRSMDVYIAKLRKYLKSDEDVEILNIHGEGFRLVVKSKVSE

Sequences:

>Translated_238_residues
MENTNKRILLVEDDLNFGAVLKDYLMLNDFEVTLAKNGMEGFEKFKKDVYDLCILDVMMPYKDGYTLAKEIREKNSEVPI
IFLTAKSMKEDVLKGYKAGADDYLNKPFDSEVLLMKIKAIIQRKSADTKAEQVQFEFNIGKFHLNSKLRFLTFQDEEPIK
LSPKENELLKMLILHENDLMPRELALTKIWRDDNYFTSRSMDVYIAKLRKYLKSDEDVEILNIHGEGFRLVVKSKVSE
>Mature_238_residues
MENTNKRILLVEDDLNFGAVLKDYLMLNDFEVTLAKNGMEGFEKFKKDVYDLCILDVMMPYKDGYTLAKEIREKNSEVPI
IFLTAKSMKEDVLKGYKAGADDYLNKPFDSEVLLMKIKAIIQRKSADTKAEQVQFEFNIGKFHLNSKLRFLTFQDEEPIK
LSPKENELLKMLILHENDLMPRELALTKIWRDDNYFTSRSMDVYIAKLRKYLKSDEDVEILNIHGEGFRLVVKSKVSE

Specific function: Member of the two-component regulatory system rprX/rprY [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=214, Percent_Identity=33.6448598130841, Blast_Score=124, Evalue=4e-30,
Organism=Escherichia coli, GI1789402, Length=224, Percent_Identity=33.4821428571429, Blast_Score=117, Evalue=8e-28,
Organism=Escherichia coli, GI1788394, Length=234, Percent_Identity=33.3333333333333, Blast_Score=116, Evalue=1e-27,
Organism=Escherichia coli, GI1786784, Length=230, Percent_Identity=32.6086956521739, Blast_Score=114, Evalue=7e-27,
Organism=Escherichia coli, GI1786599, Length=231, Percent_Identity=29.004329004329, Blast_Score=111, Evalue=5e-26,
Organism=Escherichia coli, GI1790860, Length=225, Percent_Identity=29.7777777777778, Blast_Score=104, Evalue=6e-24,
Organism=Escherichia coli, GI1790552, Length=232, Percent_Identity=31.4655172413793, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1790863, Length=233, Percent_Identity=32.1888412017167, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1787229, Length=227, Percent_Identity=29.9559471365639, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1787375, Length=223, Percent_Identity=27.3542600896861, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI87082012, Length=232, Percent_Identity=28.448275862069, Blast_Score=91, Evalue=7e-20,
Organism=Escherichia coli, GI1786911, Length=208, Percent_Identity=28.3653846153846, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI2367329, Length=236, Percent_Identity=31.7796610169492, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI145693140, Length=231, Percent_Identity=30.7359307359307, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI1790437, Length=134, Percent_Identity=34.3283582089552, Blast_Score=80, Evalue=9e-17,
Organism=Escherichia coli, GI1788550, Length=119, Percent_Identity=32.7731092436975, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1790299, Length=102, Percent_Identity=34.3137254901961, Blast_Score=70, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6322000, Length=102, Percent_Identity=32.3529411764706, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 27799; Mature: 27799

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENTNKRILLVEDDLNFGAVLKDYLMLNDFEVTLAKNGMEGFEKFKKDVYDLCILDVMMP
CCCCCCEEEEEECCCCHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCC
YKDGYTLAKEIREKNSEVPIIFLTAKSMKEDVLKGYKAGADDYLNKPFDSEVLLMKIKAI
CCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHH
IQRKSADTKAEQVQFEFNIGKFHLNSKLRFLTFQDEEPIKLSPKENELLKMLILHENDLM
HHHCCCCCCHHEEEEEEEEEEEEECCEEEEEEECCCCCEEECCCHHHHHEEEEECCCCCC
PRELALTKIWRDDNYFTSRSMDVYIAKLRKYLKSDEDVEILNIHGEGFRLVVKSKVSE
HHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCC
>Mature Secondary Structure
MENTNKRILLVEDDLNFGAVLKDYLMLNDFEVTLAKNGMEGFEKFKKDVYDLCILDVMMP
CCCCCCEEEEEECCCCHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCC
YKDGYTLAKEIREKNSEVPIIFLTAKSMKEDVLKGYKAGADDYLNKPFDSEVLLMKIKAI
CCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHH
IQRKSADTKAEQVQFEFNIGKFHLNSKLRFLTFQDEEPIKLSPKENELLKMLILHENDLM
HHHCCCCCCHHEEEEEEEEEEEEECCEEEEEEECCCCCEEECCCHHHHHEEEEECCCCCC
PRELALTKIWRDDNYFTSRSMDVYIAKLRKYLKSDEDVEILNIHGEGFRLVVKSKVSE
HHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8469117 [H]