| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is rprX [H]
Identifier: 146301203
GI number: 146301203
Start: 4126897
End: 4128483
Strand: Reverse
Name: rprX [H]
Synonym: Fjoh_3461
Alternate gene names: 146301203
Gene position: 4128483-4126897 (Counterclockwise)
Preceding gene: 146301204
Following gene: 146301202
Centisome position: 67.71
GC content: 29.74
Gene sequence:
>1587_bases ATGAATAAATTATTTTTTAGAATACTTGTTTTATTGATGAGTTTGTCCTTAATAGGGATAATTCTGGTACAGGTATTTTG GTTCAATTCTTCATTTAAAAATAATGAAGAACAGTTTAAATACCACGTTACACAAGTAATTGGAAATGTTGCAGATAAAC TTGAGCAGCAAGAAGAATACAGTTTTTACGACAAATACAACCGTATAAAAGACAGTACCGGTAAAATTCCACAAAAGGAA GACTTACTTGAAGTATTGTATGTACAAAGAAACACAAAAACAAATAAAACAATTGTTTATTCTAATACTCTAAGCTCTGA AGATTACGATATAGACGGATCTCTTTTTAATAAAAGATTCAGCAGCGAAAGATTTAAAAATTTCAGCTCTAAAAGAGTAA CAGAAGTTTATAATAATAACAACGGAATTGATAATAATAGTTTAGGTCAAAGTATTATTCCGGATCTTAAAATTGAAAAA TCCGGAAGTTTAGATATTTTAAATAAAGTTCAGCAGCAGATTCAGTATAAAGACATTGCTTCATTAACCCCCATTGAAGG TCGAATTACAAAAGATAAACTGCATAAACTATTAAAAAAGGAATTAGAAGAATACGGTGTTAAAACCAAATTCGAATACG GAATTTACAGCAGCGGTGTTCCAACCAAAATTAAATCGGATGGATTTCACTATGACAAAGAAGCAACATATAATATTCCG ATATATACTGATAACGAAGGGAACAGCCGATATGAATTATCAGTTACCTTCCCAAATAAAAAGAAATTTTTATTATCTGA GTTATTAAGTATTACTATTTTATCGATAGTATTTACATTAATTATAATAGTTGCTTACACAAGTGCATTAAATCAATTAC TGCGTCAAAAACATATTTCTGAAATCAAAACAGATTTTATTAATAATATGACGCACGAGTTTAAAACACCAATTGCAACG ATTAACTTAGCTCTAGATGCTATCAGGAGTCCTAAAGTAATTGAAGATAAAGAAAAAGTCTATCGATATCTTCAAATGAT AAGGGATGAAAATAAAAGAATGCATGCCCAGGTTGAAAATGTACTCCGTATTTCTAAATTAGAAAAAAGAGAACTTGATA TTACAAAAGAACCAACTGTAGTAACTGATATTATTGACGATGCAATCGAGCATGTAAATTTAATTTTAGAAGACAGAGAA GGTACGGTTGTAAAACACTATAATGCAGCAAGAACAACGTGTTTGATTAATGAAGTGCATTTTACAAACGTATTAGTTAA TATTTTAGAGAATGCTATAAAGTATTCGCCGGGAACACCCGAAATTGAAATATTTACAGAAAATGTAAAAGATATGATCC TGATAAAAGTAAGAGATCATGGTTTAGGAATGAGTAAGATAGCTCAAAAACGAGTGTTTGAGAAATTTTACAGAGAACAT ACAGGAGACCTTCATAATGTAAAAGGACACGGTTTAGGTCTTGCTTATGTAAAAAGAATTGTCGAGGATCACAATGGACA AGTATATGTTGAAAGCGAAAAAGGAAAAGGTAGCACCTTTATAATAAAAATACCATTAATAAATTAA
Upstream 100 bases:
>100_bases AAATTCTTAAAATTTTGAAAATAAAACAAAAACAGTCTTAAATGTTAATATTTGGTTAATGTATTATTTAGTATATTGTT AAAATATTAATTTTGTTTCG
Downstream 100 bases:
>100_bases AATATGGAAAATACTAACAAAAGAATACTTTTAGTAGAAGATGACCTAAATTTTGGGGCGGTTCTTAAAGATTATCTAAT GTTAAATGACTTTGAAGTTA
Product: integral membrane sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 528; Mature: 528
Protein sequence:
>528_residues MNKLFFRILVLLMSLSLIGIILVQVFWFNSSFKNNEEQFKYHVTQVIGNVADKLEQQEEYSFYDKYNRIKDSTGKIPQKE DLLEVLYVQRNTKTNKTIVYSNTLSSEDYDIDGSLFNKRFSSERFKNFSSKRVTEVYNNNNGIDNNSLGQSIIPDLKIEK SGSLDILNKVQQQIQYKDIASLTPIEGRITKDKLHKLLKKELEEYGVKTKFEYGIYSSGVPTKIKSDGFHYDKEATYNIP IYTDNEGNSRYELSVTFPNKKKFLLSELLSITILSIVFTLIIIVAYTSALNQLLRQKHISEIKTDFINNMTHEFKTPIAT INLALDAIRSPKVIEDKEKVYRYLQMIRDENKRMHAQVENVLRISKLEKRELDITKEPTVVTDIIDDAIEHVNLILEDRE GTVVKHYNAARTTCLINEVHFTNVLVNILENAIKYSPGTPEIEIFTENVKDMILIKVRDHGLGMSKIAQKRVFEKFYREH TGDLHNVKGHGLGLAYVKRIVEDHNGQVYVESEKGKGSTFIIKIPLIN
Sequences:
>Translated_528_residues MNKLFFRILVLLMSLSLIGIILVQVFWFNSSFKNNEEQFKYHVTQVIGNVADKLEQQEEYSFYDKYNRIKDSTGKIPQKE DLLEVLYVQRNTKTNKTIVYSNTLSSEDYDIDGSLFNKRFSSERFKNFSSKRVTEVYNNNNGIDNNSLGQSIIPDLKIEK SGSLDILNKVQQQIQYKDIASLTPIEGRITKDKLHKLLKKELEEYGVKTKFEYGIYSSGVPTKIKSDGFHYDKEATYNIP IYTDNEGNSRYELSVTFPNKKKFLLSELLSITILSIVFTLIIIVAYTSALNQLLRQKHISEIKTDFINNMTHEFKTPIAT INLALDAIRSPKVIEDKEKVYRYLQMIRDENKRMHAQVENVLRISKLEKRELDITKEPTVVTDIIDDAIEHVNLILEDRE GTVVKHYNAARTTCLINEVHFTNVLVNILENAIKYSPGTPEIEIFTENVKDMILIKVRDHGLGMSKIAQKRVFEKFYREH TGDLHNVKGHGLGLAYVKRIVEDHNGQVYVESEKGKGSTFIIKIPLIN >Mature_528_residues MNKLFFRILVLLMSLSLIGIILVQVFWFNSSFKNNEEQFKYHVTQVIGNVADKLEQQEEYSFYDKYNRIKDSTGKIPQKE DLLEVLYVQRNTKTNKTIVYSNTLSSEDYDIDGSLFNKRFSSERFKNFSSKRVTEVYNNNNGIDNNSLGQSIIPDLKIEK SGSLDILNKVQQQIQYKDIASLTPIEGRITKDKLHKLLKKELEEYGVKTKFEYGIYSSGVPTKIKSDGFHYDKEATYNIP IYTDNEGNSRYELSVTFPNKKKFLLSELLSITILSIVFTLIIIVAYTSALNQLLRQKHISEIKTDFINNMTHEFKTPIAT INLALDAIRSPKVIEDKEKVYRYLQMIRDENKRMHAQVENVLRISKLEKRELDITKEPTVVTDIIDDAIEHVNLILEDRE GTVVKHYNAARTTCLINEVHFTNVLVNILENAIKYSPGTPEIEIFTENVKDMILIKVRDHGLGMSKIAQKRVFEKFYREH TGDLHNVKGHGLGLAYVKRIVEDHNGQVYVESEKGKGSTFIIKIPLIN
Specific function: Member of the two-component regulatory system rprX/rprY. May activate rprY by phosphorylation [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI145693157, Length=231, Percent_Identity=25.5411255411255, Blast_Score=86, Evalue=6e-18, Organism=Escherichia coli, GI1790861, Length=203, Percent_Identity=29.064039408867, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI1786783, Length=227, Percent_Identity=26.8722466960352, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1786600, Length=224, Percent_Identity=25.4464285714286, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI48994928, Length=234, Percent_Identity=26.0683760683761, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1788713, Length=234, Percent_Identity=25.6410256410256, Blast_Score=75, Evalue=8e-15, Organism=Escherichia coli, GI1790346, Length=244, Percent_Identity=23.7704918032787, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1789149, Length=238, Percent_Identity=25.2100840336134, Blast_Score=73, Evalue=6e-14, Organism=Escherichia coli, GI1786912, Length=320, Percent_Identity=22.8125, Blast_Score=69, Evalue=8e-13, Organism=Escherichia coli, GI87082128, Length=260, Percent_Identity=25.7692307692308, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1788393, Length=226, Percent_Identity=22.5663716814159, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1788549, Length=313, Percent_Identity=23.961661341853, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1790551, Length=254, Percent_Identity=24.8031496062992, Blast_Score=63, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 61001; Mature: 61001
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLFFRILVLLMSLSLIGIILVQVFWFNSSFKNNEEQFKYHVTQVIGNVADKLEQQEEY CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SFYDKYNRIKDSTGKIPQKEDLLEVLYVQRNTKTNKTIVYSNTLSSEDYDIDGSLFNKRF HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHH SSERFKNFSSKRVTEVYNNNNGIDNNSLGQSIIPDLKIEKSGSLDILNKVQQQIQYKDIA HHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHCCCCEECCCCCHHHHHHHHHHHHHHHHH SLTPIEGRITKDKLHKLLKKELEEYGVKTKFEYGIYSSGVPTKIKSDGFHYDKEATYNIP CCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEE IYTDNEGNSRYELSVTFPNKKKFLLSELLSITILSIVFTLIIIVAYTSALNQLLRQKHIS EEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EIKTDFINNMTHEFKTPIATINLALDAIRSPKVIEDKEKVYRYLQMIRDENKRMHAQVEN HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHH VLRISKLEKRELDITKEPTVVTDIIDDAIEHVNLILEDREGTVVKHYNAARTTCLINEVH HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEEECCCCCEEEECCCHHHHHEEHHHH FTNVLVNILENAIKYSPGTPEIEIFTENVKDMILIKVRDHGLGMSKIAQKRVFEKFYREH HHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHH TGDLHNVKGHGLGLAYVKRIVEDHNGQVYVESEKGKGSTFIIKIPLIN CCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEECCC >Mature Secondary Structure MNKLFFRILVLLMSLSLIGIILVQVFWFNSSFKNNEEQFKYHVTQVIGNVADKLEQQEEY CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SFYDKYNRIKDSTGKIPQKEDLLEVLYVQRNTKTNKTIVYSNTLSSEDYDIDGSLFNKRF HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHH SSERFKNFSSKRVTEVYNNNNGIDNNSLGQSIIPDLKIEKSGSLDILNKVQQQIQYKDIA HHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHCCCCEECCCCCHHHHHHHHHHHHHHHHH SLTPIEGRITKDKLHKLLKKELEEYGVKTKFEYGIYSSGVPTKIKSDGFHYDKEATYNIP CCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEE IYTDNEGNSRYELSVTFPNKKKFLLSELLSITILSIVFTLIIIVAYTSALNQLLRQKHIS EEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EIKTDFINNMTHEFKTPIATINLALDAIRSPKVIEDKEKVYRYLQMIRDENKRMHAQVEN HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHH VLRISKLEKRELDITKEPTVVTDIIDDAIEHVNLILEDREGTVVKHYNAARTTCLINEVH HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEEECCCCCEEEECCCHHHHHEEHHHH FTNVLVNILENAIKYSPGTPEIEIFTENVKDMILIKVRDHGLGMSKIAQKRVFEKFYREH HHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHH TGDLHNVKGHGLGLAYVKRIVEDHNGQVYVESEKGKGSTFIIKIPLIN CCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8469117 [H]