| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301197
Identifier: 146301197
GI number: 146301197
Start: 4121564
End: 4122097
Strand: Reverse
Name: 146301197
Synonym: Fjoh_3455
Alternate gene names: NA
Gene position: 4122097-4121564 (Counterclockwise)
Preceding gene: 146301198
Following gene: 146301188
Centisome position: 67.61
GC content: 27.34
Gene sequence:
>534_bases ATGAAAACAATTGATAAATACCTTTTTCAAGCCTTGGATAATTATCCGTTTTGGCTTGAAGGAACAATAGAATCTTTAGA TTATGCTTTTTCTTATGACGATAAAAACACGATGGTTTTGTGTTTGTACGGAAGGATACAAGCAGAACAATTAATGAATT ATGAAGAAGCGAAATTGTATTTTCAGCAGGCTTTATCAATTAATATTCATGCACTTGAAGTATATCCGTATTATTTAAAA ACATTGATTTTAAATGAAGATTACGAAGAAGCGCAGAAATTAATAGATTTTGCTTTAAAGGTTAAAGGAATCAATAAATC AGAGATTTACATTAAAAAAGCAATTCTGTTAGAAGTACAGCATAAATTCAAAGATGCCTTAAAAGAAATTAAGCAGGCAA AATTATATTCTATTTTACATGACTATGATTCAGGAATTAGTGAAGTTGAGAAAAGAATTAAAGGTAAAATGGATTTGTTA AAAAAGAAGAAAGAGAAAAAATCTAAGAAAGGTTCTAAAAAGAAATTGAAATGA
Upstream 100 bases:
>100_bases GGAAATCCAATTAGAGTTTTTACAGGAAGTGATTTTAAAAAGATTAAAGTTGAGAAAAGCTACAAAGGAACTCGTCAGAA ATTAAAAAACGATTTACGAA
Downstream 100 bases:
>100_bases TTTTAAACAAAAAAACGATGCAATTTTGCATCGTTTTTTTTTGTTCTATGAAGAATATTTAGATAAAGTTTGTCATTTCG ACGAAGGAGAAATCTCCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MKTIDKYLFQALDNYPFWLEGTIESLDYAFSYDDKNTMVLCLYGRIQAEQLMNYEEAKLYFQQALSINIHALEVYPYYLK TLILNEDYEEAQKLIDFALKVKGINKSEIYIKKAILLEVQHKFKDALKEIKQAKLYSILHDYDSGISEVEKRIKGKMDLL KKKKEKKSKKGSKKKLK
Sequences:
>Translated_177_residues MKTIDKYLFQALDNYPFWLEGTIESLDYAFSYDDKNTMVLCLYGRIQAEQLMNYEEAKLYFQQALSINIHALEVYPYYLK TLILNEDYEEAQKLIDFALKVKGINKSEIYIKKAILLEVQHKFKDALKEIKQAKLYSILHDYDSGISEVEKRIKGKMDLL KKKKEKKSKKGSKKKLK >Mature_177_residues MKTIDKYLFQALDNYPFWLEGTIESLDYAFSYDDKNTMVLCLYGRIQAEQLMNYEEAKLYFQQALSINIHALEVYPYYLK TLILNEDYEEAQKLIDFALKVKGINKSEIYIKKAILLEVQHKFKDALKEIKQAKLYSILHDYDSGISEVEKRIKGKMDLL KKKKEKKSKKGSKKKLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20912; Mature: 20912
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTIDKYLFQALDNYPFWLEGTIESLDYAFSYDDKNTMVLCLYGRIQAEQLMNYEEAKLY CCHHHHHHHHHHCCCCEEEECHHHHHHHEEEECCCCCEEEEEECCCCHHHHHCHHHHHHH FQQALSINIHALEVYPYYLKTLILNEDYEEAQKLIDFALKVKGINKSEIYIKKAILLEVQ HHHHHHCEEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH HKFKDALKEIKQAKLYSILHDYDSGISEVEKRIKGKMDLLKKKKEKKSKKGSKKKLK HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKTIDKYLFQALDNYPFWLEGTIESLDYAFSYDDKNTMVLCLYGRIQAEQLMNYEEAKLY CCHHHHHHHHHHCCCCEEEECHHHHHHHEEEECCCCCEEEEEECCCCHHHHHCHHHHHHH FQQALSINIHALEVYPYYLKTLILNEDYEEAQKLIDFALKVKGINKSEIYIKKAILLEVQ HHHHHHCEEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH HKFKDALKEIKQAKLYSILHDYDSGISEVEKRIKGKMDLLKKKKEKKSKKGSKKKLK HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA