| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
Click here to switch to the map view.
The map label for this gene is argG [H]
Identifier: 146301177
GI number: 146301177
Start: 4102912
End: 4104105
Strand: Reverse
Name: argG [H]
Synonym: Fjoh_3435
Alternate gene names: 146301177
Gene position: 4104105-4102912 (Counterclockwise)
Preceding gene: 146301178
Following gene: 146301176
Centisome position: 67.31
GC content: 34.59
Gene sequence:
>1194_bases ATGAAAAAAGTAGTATTAGCTTATAGCGGAGGATTAGATACCTCGTATTGTTTGAAATATTTAAAAAACGAAAAAGGTTA TGAAGTTCATACCGTTCTTGTTGATACAGGAGGGTTTAGTGCAGAAGAATTATCAGCTATAGAAAAAAGAGCTTACGAAT TAGGAAGTGCGCAGCATGCTAACTTAACAATTTTAGACAAATATTACGATAAAGCTATAAAATACCTGATTTTTGGAAAT GTATTAAAAAATAATACATACCCATTATCAGTAAGTGCAGAGCGTGTTTTTCAAGCAATTGAAGCTATAAAATATGCAAA AAAAGTTGGAGCAACTGCAATCGCTCACGGAAGTACAGGCGCAGGAAACGACCAAATTCGTTTCGATTTGATTTTCCAAA CTATTGCTCCAGAAATCGAAATTATTACTCCAATTAGAGATTTAAAACTTTCAAGACAAGAAGAAGTTGATTATTTGGCT CAAAACGGAGTTCACTACTCTTGGGAAAAAGCACAATATTCTATCAATAAAGGACTTTGGGGAACAAGTGTTGGAGGAAA AGAAACTTTAACTTCTGGTCAGCCATTGCCAAGTGAAGCGTATCCTTCGCAATTGCAAAAAGAAGGTGAAGAAAAAATAA CACTTCATTTTGAGCAGGGAGAATTAGTTGGTTTAAACGGAAAAACGGATAAACCATCAAATAATATTGTGGCTCTTGAA AAGCTGGCAAGTGCTTATGCAATTGGTAGAGATATTCATGTTGGAGATACAATTATAGGAATTAAAGGTAGAGTTGGTTT TGAAGCAGCAGCTCCGTTAATTATTATCAAAGCGCACCATTTATTAGAGAAACACACTCTAGGAAAATGGCAGCAATACT GGAAAGAACAATTAGGAAACTGGTACGGAATGTTGTTCCACGAAGGTCAGTTCTTAGATCCAGTAATGAGAAATATTGAA ACTTTCTTGCAAGACACACAAAAAACAGTAAATGGAACAGTAACTGTTTCATTAAAACCATATCATTTCTCACTTGACGG AATCGAATCTGAAAATGATTTAATGAACACAGGTTTCGGTCAATACGGCGAAATGAACAATGCCTGGACATCTGACGATG CAAAAGGATTTATCAAGATTTTAGGAAATGCACAAAACATATTCTCATCTGTAAACAAATTAGATCATGATTAA
Upstream 100 bases:
>100_bases TTCTTAAACAAAATATTGTCATTTATTTTTTTATTCAAAATTTAATCAAAAAGAAATCTCAAACTGCTATATACGAAAGT ATTAGCCTAAATTATAAAAA
Downstream 100 bases:
>100_bases TGTCGGAATTATTGGTGGTTCGGGCTACACGGCCGGAGAACTCATCAGAATTTTAATGTATCACCCAAAAGTAAACATCG ATTTTGTTTACAGTACAACA
Product: argininosuccinate synthase
Products: NA
Alternate protein names: Citrulline--aspartate ligase [H]
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MKKVVLAYSGGLDTSYCLKYLKNEKGYEVHTVLVDTGGFSAEELSAIEKRAYELGSAQHANLTILDKYYDKAIKYLIFGN VLKNNTYPLSVSAERVFQAIEAIKYAKKVGATAIAHGSTGAGNDQIRFDLIFQTIAPEIEIITPIRDLKLSRQEEVDYLA QNGVHYSWEKAQYSINKGLWGTSVGGKETLTSGQPLPSEAYPSQLQKEGEEKITLHFEQGELVGLNGKTDKPSNNIVALE KLASAYAIGRDIHVGDTIIGIKGRVGFEAAAPLIIIKAHHLLEKHTLGKWQQYWKEQLGNWYGMLFHEGQFLDPVMRNIE TFLQDTQKTVNGTVTVSLKPYHFSLDGIESENDLMNTGFGQYGEMNNAWTSDDAKGFIKILGNAQNIFSSVNKLDHD
Sequences:
>Translated_397_residues MKKVVLAYSGGLDTSYCLKYLKNEKGYEVHTVLVDTGGFSAEELSAIEKRAYELGSAQHANLTILDKYYDKAIKYLIFGN VLKNNTYPLSVSAERVFQAIEAIKYAKKVGATAIAHGSTGAGNDQIRFDLIFQTIAPEIEIITPIRDLKLSRQEEVDYLA QNGVHYSWEKAQYSINKGLWGTSVGGKETLTSGQPLPSEAYPSQLQKEGEEKITLHFEQGELVGLNGKTDKPSNNIVALE KLASAYAIGRDIHVGDTIIGIKGRVGFEAAAPLIIIKAHHLLEKHTLGKWQQYWKEQLGNWYGMLFHEGQFLDPVMRNIE TFLQDTQKTVNGTVTVSLKPYHFSLDGIESENDLMNTGFGQYGEMNNAWTSDDAKGFIKILGNAQNIFSSVNKLDHD >Mature_397_residues MKKVVLAYSGGLDTSYCLKYLKNEKGYEVHTVLVDTGGFSAEELSAIEKRAYELGSAQHANLTILDKYYDKAIKYLIFGN VLKNNTYPLSVSAERVFQAIEAIKYAKKVGATAIAHGSTGAGNDQIRFDLIFQTIAPEIEIITPIRDLKLSRQEEVDYLA QNGVHYSWEKAQYSINKGLWGTSVGGKETLTSGQPLPSEAYPSQLQKEGEEKITLHFEQGELVGLNGKTDKPSNNIVALE KLASAYAIGRDIHVGDTIIGIKGRVGFEAAAPLIIIKAHHLLEKHTLGKWQQYWKEQLGNWYGMLFHEGQFLDPVMRNIE TFLQDTQKTVNGTVTVSLKPYHFSLDGIESENDLMNTGFGQYGEMNNAWTSDDAKGFIKILGNAQNIFSSVNKLDHD
Specific function: Arginine biosynthesis; seventh step. [C]
COG id: COG0137
COG function: function code E; Argininosuccinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the argininosuccinate synthase family. Type 1 subfamily [H]
Homologues:
Organism=Homo sapiens, GI53759107, Length=392, Percent_Identity=27.8061224489796, Blast_Score=106, Evalue=4e-23, Organism=Homo sapiens, GI16950633, Length=392, Percent_Identity=27.8061224489796, Blast_Score=106, Evalue=4e-23, Organism=Escherichia coli, GI1789563, Length=359, Percent_Identity=27.2980501392758, Blast_Score=76, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6324514, Length=362, Percent_Identity=31.767955801105, Blast_Score=139, Evalue=8e-34, Organism=Drosophila melanogaster, GI21358151, Length=408, Percent_Identity=28.1862745098039, Blast_Score=127, Evalue=9e-30,
Paralogues:
None
Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001518 - InterPro: IPR018223 - InterPro: IPR014729 [H]
Pfam domain/function: PF00764 Arginosuc_synth [H]
EC number: =6.3.4.5 [H]
Molecular weight: Translated: 44133; Mature: 44133
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS00564 ARGININOSUCCIN_SYN_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVVLAYSGGLDTSYCLKYLKNEKGYEVHTVLVDTGGFSAEELSAIEKRAYELGSAQHA CCEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCC NLTILDKYYDKAIKYLIFGNVLKNNTYPLSVSAERVFQAIEAIKYAKKVGATAIAHGSTG CEEEEHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHCCEEEECCCCC AGNDQIRFDLIFQTIAPEIEIITPIRDLKLSRQEEVDYLAQNGVHYSWEKAQYSINKGLW CCCCCEEEEEEEHHHCCCEEEECCHHHHCCCCHHHHHHHHHCCCCEEHHHHHEECCCCCC GTSVGGKETLTSGQPLPSEAYPSQLQKEGEEKITLHFEQGELVGLNGKTDKPSNNIVALE CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEECCCEEECCCCCCCCCCCEEHHH KLASAYAIGRDIHVGDTIIGIKGRVGFEAAAPLIIIKAHHLLEKHTLGKWQQYWKEQLGN HHHHHHHCCCEEECCCEEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCC WYGMLFHEGQFLDPVMRNIETFLQDTQKTVNGTVTVSLKPYHFSLDGIESENDLMNTGFG EEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECEEEEECCCCCCCCHHHCCCC QYGEMNNAWTSDDAKGFIKILGNAQNIFSSVNKLDHD CCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCC >Mature Secondary Structure MKKVVLAYSGGLDTSYCLKYLKNEKGYEVHTVLVDTGGFSAEELSAIEKRAYELGSAQHA CCEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCC NLTILDKYYDKAIKYLIFGNVLKNNTYPLSVSAERVFQAIEAIKYAKKVGATAIAHGSTG CEEEEHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHCCEEEECCCCC AGNDQIRFDLIFQTIAPEIEIITPIRDLKLSRQEEVDYLAQNGVHYSWEKAQYSINKGLW CCCCCEEEEEEEHHHCCCEEEECCHHHHCCCCHHHHHHHHHCCCCEEHHHHHEECCCCCC GTSVGGKETLTSGQPLPSEAYPSQLQKEGEEKITLHFEQGELVGLNGKTDKPSNNIVALE CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEECCCEEECCCCCCCCCCCEEHHH KLASAYAIGRDIHVGDTIIGIKGRVGFEAAAPLIIIKAHHLLEKHTLGKWQQYWKEQLGN HHHHHHHCCCEEECCCEEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCC WYGMLFHEGQFLDPVMRNIETFLQDTQKTVNGTVTVSLKPYHFSLDGIESENDLMNTGFG EEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECEEEEECCCCCCCCHHHCCCC QYGEMNNAWTSDDAKGFIKILGNAQNIFSSVNKLDHD CCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]