| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is argC
Identifier: 146301176
GI number: 146301176
Start: 4101942
End: 4102919
Strand: Reverse
Name: argC
Synonym: Fjoh_3434
Alternate gene names: 146301176
Gene position: 4102919-4101942 (Counterclockwise)
Preceding gene: 146301177
Following gene: 146301175
Centisome position: 67.3
GC content: 35.28
Gene sequence:
>978_bases ATGATTAATGTCGGAATTATTGGTGGTTCGGGCTACACGGCCGGAGAACTCATCAGAATTTTAATGTATCACCCAAAAGT AAACATCGATTTTGTTTACAGTACAACAAACGCCGGGAAACCGCTTTCTGTAGCGCACCACGATTTGATGGGTGATATTG AAATGAATTTCACAGCTGAAATTAATCCAAATGTGAACGTTGTTTTCTTGTGTTTAGGACATGGAAAATCGATTTCATTT TTGAAAGAAAATCAGTTCGCAAGTCACACCAAAATCATCGATTTAGGAAATGATTTCAGATTGAATAAAGACGCTCATTT CGAAGGAAAAGATTTTGTTTACGGATTGCCAGAGATCAATAAAGCGGAAATCAAAAAGACAAATTATATCGCCAATCCAG GCTGTTTTGCAACTGCTATTCAGTTGGCTTTATTACCTTTAGCAAAACACAATTTGTTGAATAATGATGTTCATATTAAT GCTACAACCGGAAGTACAGGAGCAGGAGTAAGTCTTTCAGAAACTTCTCATTTCAGTTGGAGAAACAACAATATGTCGCA TTATAAAGCTTTTGAGCATCAACATTTGGGAGAAATCGGAGAAAGCTTAGTTCAGTTGCAAGACGATTTTGACAGCGAGT TGCTTTTTATTCCGAATAGAGGAGATTTTCCAAGAGGAATTTTTGCAACCTTATATACATTATGTGATGATAGTTTGGAA CAATTGGTTGCAAAATATGAAGAGTTCTATAAAAATGAGCCTTTCGTAACTGTTACCACAACAAACATCAACATGAAACA AGTGGTGCAAACGAATAAATGTATTATTAGTTTATTGAAAAAAGGAAACCGGGTTCTTATAACATCAATTATCGATAACT TAACCAAAGGTGCTTCAGGACAAGCGATTCAAAACATGAATTTAATGTTCGGTTTAGAAGAAACCACAGGTTTACATTTG AAACCAAGCGGATTTTAA
Upstream 100 bases:
>100_bases GGCGAAATGAACAATGCCTGGACATCTGACGATGCAAAAGGATTTATCAAGATTTTAGGAAATGCACAAAACATATTCTC ATCTGTAAACAAATTAGATC
Downstream 100 bases:
>100_bases TTTTAGTTGATAGTTGTTGGTTTATAGTTGATAGATATCGAACAAAAACCAACAACCATCAACCATCAACAATAAACTAA CAACTAAAAAAAAGATGAAC
Product: N-acetyl-gamma-glutamyl-phosphate reductase
Products: NA
Alternate protein names: AGPR; N-acetyl-glutamate semialdehyde dehydrogenase; NAGSA dehydrogenase
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MINVGIIGGSGYTAGELIRILMYHPKVNIDFVYSTTNAGKPLSVAHHDLMGDIEMNFTAEINPNVNVVFLCLGHGKSISF LKENQFASHTKIIDLGNDFRLNKDAHFEGKDFVYGLPEINKAEIKKTNYIANPGCFATAIQLALLPLAKHNLLNNDVHIN ATTGSTGAGVSLSETSHFSWRNNNMSHYKAFEHQHLGEIGESLVQLQDDFDSELLFIPNRGDFPRGIFATLYTLCDDSLE QLVAKYEEFYKNEPFVTVTTTNINMKQVVQTNKCIISLLKKGNRVLITSIIDNLTKGASGQAIQNMNLMFGLEETTGLHL KPSGF
Sequences:
>Translated_325_residues MINVGIIGGSGYTAGELIRILMYHPKVNIDFVYSTTNAGKPLSVAHHDLMGDIEMNFTAEINPNVNVVFLCLGHGKSISF LKENQFASHTKIIDLGNDFRLNKDAHFEGKDFVYGLPEINKAEIKKTNYIANPGCFATAIQLALLPLAKHNLLNNDVHIN ATTGSTGAGVSLSETSHFSWRNNNMSHYKAFEHQHLGEIGESLVQLQDDFDSELLFIPNRGDFPRGIFATLYTLCDDSLE QLVAKYEEFYKNEPFVTVTTTNINMKQVVQTNKCIISLLKKGNRVLITSIIDNLTKGASGQAIQNMNLMFGLEETTGLHL KPSGF >Mature_325_residues MINVGIIGGSGYTAGELIRILMYHPKVNIDFVYSTTNAGKPLSVAHHDLMGDIEMNFTAEINPNVNVVFLCLGHGKSISF LKENQFASHTKIIDLGNDFRLNKDAHFEGKDFVYGLPEINKAEIKKTNYIANPGCFATAIQLALLPLAKHNLLNNDVHIN ATTGSTGAGVSLSETSHFSWRNNNMSHYKAFEHQHLGEIGESLVQLQDDFDSELLFIPNRGDFPRGIFATLYTLCDDSLE QLVAKYEEFYKNEPFVTVTTTNINMKQVVQTNKCIISLLKKGNRVLITSIIDNLTKGASGQAIQNMNLMFGLEETTGLHL KPSGF
Specific function: Arginine biosynthesis; third step. [C]
COG id: COG0002
COG function: function code E; Acetylglutamate semialdehyde dehydrogenase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAGSA dehydrogenase family. Type 1 subfamily
Homologues:
Organism=Escherichia coli, GI1790396, Length=345, Percent_Identity=33.0434782608696, Blast_Score=146, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6320913, Length=330, Percent_Identity=29.3939393939394, Blast_Score=105, Evalue=9e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ARGC_FLAJ1 (A5FEC6)
Other databases:
- EMBL: CP000685 - RefSeq: YP_001195767.1 - ProteinModelPortal: A5FEC6 - SMR: A5FEC6 - STRING: A5FEC6 - GeneID: 5093682 - GenomeReviews: CP000685_GR - KEGG: fjo:Fjoh_3434 - eggNOG: COG0002 - HOGENOM: HBG294213 - OMA: DTKKFME - ProtClustDB: PRK00436 - BioCyc: FJOH376686:FJOH_3434-MONOMER - GO: GO:0005737 - HAMAP: MF_00150 - InterPro: IPR023013 - InterPro: IPR000706 - InterPro: IPR016040 - InterPro: IPR000534 - Gene3D: G3DSA:3.40.50.720 - SMART: SM00859 - TIGRFAMs: TIGR01850
Pfam domain/function: PF01118 Semialdhyde_dh
EC number: =1.2.1.38
Molecular weight: Translated: 36015; Mature: 36015
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: PS01224 ARGC
Important sites: ACT_SITE 135-135
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINVGIIGGSGYTAGELIRILMYHPKVNIDFVYSTTNAGKPLSVAHHDLMGDIEMNFTAE CEEEEEECCCCCCHHHHHHHHEECCCCCEEEEEECCCCCCCCCHHHHHHCCCEEEEEEEE INPNVNVVFLCLGHGKSISFLKENQFASHTKIIDLGNDFRLNKDAHFEGKDFVYGLPEIN ECCCCEEEEEEECCCCEEEEEECCCCCCCEEEEECCCCEEECCCCCCCCCCEEEECCCCC KAEIKKTNYIANPGCFATAIQLALLPLAKHNLLNNDVHINATTGSTGAGVSLSETSHFSW HHHEECCCEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEECCCCCEEE RNNNMSHYKAFEHQHLGEIGESLVQLQDDFDSELLFIPNRGDFPRGIFATLYTLCDDSLE CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHH QLVAKYEEFYKNEPFVTVTTTNINMKQVVQTNKCIISLLKKGNRVLITSIIDNLTKGASG HHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCCCCC QAIQNMNLMFGLEETTGLHLKPSGF CEEECCEEEEEECCCCCEEECCCCC >Mature Secondary Structure MINVGIIGGSGYTAGELIRILMYHPKVNIDFVYSTTNAGKPLSVAHHDLMGDIEMNFTAE CEEEEEECCCCCCHHHHHHHHEECCCCCEEEEEECCCCCCCCCHHHHHHCCCEEEEEEEE INPNVNVVFLCLGHGKSISFLKENQFASHTKIIDLGNDFRLNKDAHFEGKDFVYGLPEIN ECCCCEEEEEEECCCCEEEEEECCCCCCCEEEEECCCCEEECCCCCCCCCCEEEECCCCC KAEIKKTNYIANPGCFATAIQLALLPLAKHNLLNNDVHINATTGSTGAGVSLSETSHFSW HHHEECCCEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEECCCCCEEE RNNNMSHYKAFEHQHLGEIGESLVQLQDDFDSELLFIPNRGDFPRGIFATLYTLCDDSLE CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHH QLVAKYEEFYKNEPFVTVTTTNINMKQVVQTNKCIISLLKKGNRVLITSIIDNLTKGASG HHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCCCCC QAIQNMNLMFGLEETTGLHLKPSGF CEEECCEEEEEECCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA