| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is argE [H]
Identifier: 146301170
GI number: 146301170
Start: 4095178
End: 4096248
Strand: Reverse
Name: argE [H]
Synonym: Fjoh_3428
Alternate gene names: 146301170
Gene position: 4096248-4095178 (Counterclockwise)
Preceding gene: 146301171
Following gene: 146301169
Centisome position: 67.19
GC content: 35.95
Gene sequence:
>1071_bases ATGAAAAACATAGATACGCTTACTCAGGAAGCAATTAGTTTATTAAGAAGCTTAATCGAAACCCCTTCGTTTTCAAGTGA AGAAGATCAGACGGCTCTTTTAATCGAAAATTGGTTCAATCAAAATGAAATTCCATTCAAGAGAGAAAACAACAATGTGT GGGCTTTCAACAAATATTTCGACGAAAACAAACCAACACTTTTATTAAACTCACATCACGATACTGTACGACCAAATCAG GCATACACCAACGATCCGTTTAAAGCAATCGAAAAAGACGGAAAATTATTCGGATTAGGAAGTAATGATGCAGGCGGATG CCTGGTTTCGTTATTAGCAACATTTGTACATTTTTACGAAAATCAAAACCTATCCCATAATATTGTAATTGTGGCTTCTG CCGAAGAAGAAAGCAGTGGAAAAAACGGTTTAAACAGCGTTTTAAAAAGCTTACCAGAATTAGATTGCGCGATTGTAGGA GAACCAACGTTAATGCAATTAGCAGTTGCAGAAAAAGGTCTTTTAGTTTTGGATGTAAAAGTAAAAGGAACTGCGAGCCA CGCTGCGCATCAAAACGACGATAATGCATTATATAAATCAATTCCGGTAATGGAATGGTTTAAAAACTATAAATTCGACA AAATCTCAGATGTTTTAGGTCCTGTAAAAATGACCGTAACGCAAATTAATGCAGGAAAACAGCATAATGTTGTACCGTCA GAATGTGATTTGGTAGTGGATATTCGTGTAACAGACCGATATACCAATGCTGAAATTCTAGAAGTAGTAAAAGCAAATGT AAATGCCGAAGTAACGCCAAGATCAATGCATTTAAATGCATCGTCTATTCCAATTGAGCACGGTTTGGTTCAGGCTGGAA TCGCATTAGGAAGAACAACGTATGGTTCGCCAACACTTTCTGACCAATCCGTTTTAAGCTGTCAGTCTTTAAAATTAGGA CCAGGAGAAACATTGCGTTCGCATTCAGCTGACGAATTTATTTTTGTAAATGAAATTGTAGAAGGAGTCGACTTGTATAT TAAAATACTAACTGATTTCTTTAAATTATAA
Upstream 100 bases:
>100_bases GCACGAGGTATTTTAAATAAATTTGCGCAAGTAAAAATGGTCAAAGGAAAGCTCAAAAACTTTGTTGCTTTGCCCCTTTG AGCCTTTGAACCTTATTAAA
Downstream 100 bases:
>100_bases TTAAACCCGACAGGTTTTTAAAACCTGTCGGGTTTCTAAAAAATAGTACCTATGAAACTTTGGGAAAAAGGAATACCAAC AGATAAACAAATCGAGCAAT
Product: peptidase M20
Products: NA
Alternate protein names: AO; Acetylornithinase; N-acetylornithinase; NAO [H]
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MKNIDTLTQEAISLLRSLIETPSFSSEEDQTALLIENWFNQNEIPFKRENNNVWAFNKYFDENKPTLLLNSHHDTVRPNQ AYTNDPFKAIEKDGKLFGLGSNDAGGCLVSLLATFVHFYENQNLSHNIVIVASAEEESSGKNGLNSVLKSLPELDCAIVG EPTLMQLAVAEKGLLVLDVKVKGTASHAAHQNDDNALYKSIPVMEWFKNYKFDKISDVLGPVKMTVTQINAGKQHNVVPS ECDLVVDIRVTDRYTNAEILEVVKANVNAEVTPRSMHLNASSIPIEHGLVQAGIALGRTTYGSPTLSDQSVLSCQSLKLG PGETLRSHSADEFIFVNEIVEGVDLYIKILTDFFKL
Sequences:
>Translated_356_residues MKNIDTLTQEAISLLRSLIETPSFSSEEDQTALLIENWFNQNEIPFKRENNNVWAFNKYFDENKPTLLLNSHHDTVRPNQ AYTNDPFKAIEKDGKLFGLGSNDAGGCLVSLLATFVHFYENQNLSHNIVIVASAEEESSGKNGLNSVLKSLPELDCAIVG EPTLMQLAVAEKGLLVLDVKVKGTASHAAHQNDDNALYKSIPVMEWFKNYKFDKISDVLGPVKMTVTQINAGKQHNVVPS ECDLVVDIRVTDRYTNAEILEVVKANVNAEVTPRSMHLNASSIPIEHGLVQAGIALGRTTYGSPTLSDQSVLSCQSLKLG PGETLRSHSADEFIFVNEIVEGVDLYIKILTDFFKL >Mature_356_residues MKNIDTLTQEAISLLRSLIETPSFSSEEDQTALLIENWFNQNEIPFKRENNNVWAFNKYFDENKPTLLLNSHHDTVRPNQ AYTNDPFKAIEKDGKLFGLGSNDAGGCLVSLLATFVHFYENQNLSHNIVIVASAEEESSGKNGLNSVLKSLPELDCAIVG EPTLMQLAVAEKGLLVLDVKVKGTASHAAHQNDDNALYKSIPVMEWFKNYKFDKISDVLGPVKMTVTQINAGKQHNVVPS ECDLVVDIRVTDRYTNAEILEVVKANVNAEVTPRSMHLNASSIPIEHGLVQAGIALGRTTYGSPTLSDQSVLSCQSLKLG PGETLRSHSADEFIFVNEIVEGVDLYIKILTDFFKL
Specific function: Displays A Broad Specificity And Can Also Deacylate Substrates Such As Acetylarginine, Acetylhistidine Or Acetylglutamate Semialdehyde. [C]
COG id: COG0624
COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M20A family. ArgE subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790395, Length=380, Percent_Identity=26.0526315789474, Blast_Score=95, Evalue=7e-21, Organism=Escherichia coli, GI1788816, Length=277, Percent_Identity=27.0758122743682, Blast_Score=92, Evalue=5e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010169 - InterPro: IPR001261 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]
EC number: =3.5.1.16 [H]
Molecular weight: Translated: 39364; Mature: 39364
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: PS00758 ARGE_DAPE_CPG2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNIDTLTQEAISLLRSLIETPSFSSEEDQTALLIENWFNQNEIPFKRENNNVWAFNKYF CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHCCCCCCCEEECCCCEEEEEEEC DENKPTLLLNSHHDTVRPNQAYTNDPFKAIEKDGKLFGLGSNDAGGCLVSLLATFVHFYE CCCCCEEEEECCCCCCCCCCCCCCCHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHC NQNLSHNIVIVASAEEESSGKNGLNSVLKSLPELDCAIVGEPTLMQLAVAEKGLLVLDVK CCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHCCCEEEEEEE VKGTASHAAHQNDDNALYKSIPVMEWFKNYKFDKISDVLGPVKMTVTQINAGKQHNVVPS ECCCHHHHCCCCCCCHHHHHCCHHHHHHCCCCHHHHHHHCCCEEEEEEECCCCCCCCCCC ECDLVVDIRVTDRYTNAEILEVVKANVNAEVTPRSMHLNASSIPIEHGLVQAGIALGRTT CCCEEEEEEEECCCCCHHHHHHHHHCCCCEECCCEEECCCCCCCHHHHHHHHHHHHCCCC YGSPTLSDQSVLSCQSLKLGPGETLRSHSADEFIFVNEIVEGVDLYIKILTDFFKL CCCCCCCCCHHHHHHCCCCCCCHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKNIDTLTQEAISLLRSLIETPSFSSEEDQTALLIENWFNQNEIPFKRENNNVWAFNKYF CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHCCCCCCCEEECCCCEEEEEEEC DENKPTLLLNSHHDTVRPNQAYTNDPFKAIEKDGKLFGLGSNDAGGCLVSLLATFVHFYE CCCCCEEEEECCCCCCCCCCCCCCCHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHC NQNLSHNIVIVASAEEESSGKNGLNSVLKSLPELDCAIVGEPTLMQLAVAEKGLLVLDVK CCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHCCCEEEEEEE VKGTASHAAHQNDDNALYKSIPVMEWFKNYKFDKISDVLGPVKMTVTQINAGKQHNVVPS ECCCHHHHCCCCCCCHHHHHCCHHHHHHCCCCHHHHHHHCCCEEEEEEECCCCCCCCCCC ECDLVVDIRVTDRYTNAEILEVVKANVNAEVTPRSMHLNASSIPIEHGLVQAGIALGRTT CCCEEEEEEEECCCCCHHHHHHHHHCCCCEECCCEEECCCCCCCHHHHHHHHHHHHCCCC YGSPTLSDQSVLSCQSLKLGPGETLRSHSADEFIFVNEIVEGVDLYIKILTDFFKL CCCCCCCCCHHHHHHCCCCCCCHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA