Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146301121

Identifier: 146301121

GI number: 146301121

Start: 4039153

End: 4039539

Strand: Direct

Name: 146301121

Synonym: Fjoh_3379

Alternate gene names: NA

Gene position: 4039153-4039539 (Clockwise)

Preceding gene: 146301119

Following gene: 146301122

Centisome position: 66.25

GC content: 32.82

Gene sequence:

>387_bases
ATGAGTGTTATTAAAGATGAAAAAAAGCTTCTTAGCACCATTAAACGTATCGATGAAAAGATCGATAAGAATAATGATCA
AAAGATAATGGCCTTTTTTGAATCTCTTGGATTAACAGAAAGAGAGGACGTTCCCCAGAATTTTCTGGATTGGGATACGA
TTCTTATTGTCGTACCCGACCGCCACATTTCGCATGAATTAAAATATTATAAATTCTCTATATCAAGACTTTTCTTTGTA
ACAAATCCGTATGCTGATAAAATTCACATCTACGATTTTGACGAATGGAAAAGTGTTACCCGAAATAAAACCCAGTTTCA
GATTAGAGAAATAATGAAAACGAATTTTGGCGGCGTAAAGAAAATTACATCTGCAGAAAACAATTAA

Upstream 100 bases:

>100_bases
ACGGACTTCAAAAAATTTAGAATCATTCTATTGGCTATACTTTTCAAAATAATTTTGATTTGATGTAATTTTATATAAAA
ATTTAAAAAACAGAGATTAT

Downstream 100 bases:

>100_bases
TTCTAAGTTTTCATAAAAAATGAAATGGATCACACGCGAAAGACCTAAAATTGATCGAATAGCCTGTCCGTGGCTTATCA
AAAACTTTGTCGACGCTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MSVIKDEKKLLSTIKRIDEKIDKNNDQKIMAFFESLGLTEREDVPQNFLDWDTILIVVPDRHISHELKYYKFSISRLFFV
TNPYADKIHIYDFDEWKSVTRNKTQFQIREIMKTNFGGVKKITSAENN

Sequences:

>Translated_128_residues
MSVIKDEKKLLSTIKRIDEKIDKNNDQKIMAFFESLGLTEREDVPQNFLDWDTILIVVPDRHISHELKYYKFSISRLFFV
TNPYADKIHIYDFDEWKSVTRNKTQFQIREIMKTNFGGVKKITSAENN
>Mature_127_residues
SVIKDEKKLLSTIKRIDEKIDKNNDQKIMAFFESLGLTEREDVPQNFLDWDTILIVVPDRHISHELKYYKFSISRLFFVT
NPYADKIHIYDFDEWKSVTRNKTQFQIREIMKTNFGGVKKITSAENN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15251; Mature: 15119

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVIKDEKKLLSTIKRIDEKIDKNNDQKIMAFFESLGLTEREDVPQNFLDWDTILIVVPD
CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECC
RHISHELKYYKFSISRLFFVTNPYADKIHIYDFDEWKSVTRNKTQFQIREIMKTNFGGVK
CHHHHHHHHHEEEEEEEEEEECCCCCEEEEEECHHHHHHHCCCHHHHHHHHHHCCCCCCE
KITSAENN
ECCCCCCC
>Mature Secondary Structure 
SVIKDEKKLLSTIKRIDEKIDKNNDQKIMAFFESLGLTEREDVPQNFLDWDTILIVVPD
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECC
RHISHELKYYKFSISRLFFVTNPYADKIHIYDFDEWKSVTRNKTQFQIREIMKTNFGGVK
CHHHHHHHHHEEEEEEEEEEECCCCCEEEEEECHHHHHHHCCCHHHHHHHHHHCCCCCCE
KITSAENN
ECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA