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The map label for this gene is yciF [H]

Identifier: 146301107

GI number: 146301107

Start: 4025572

End: 4026168

Strand: Reverse

Name: yciF [H]

Synonym: Fjoh_3365

Alternate gene names: 146301107

Gene position: 4026168-4025572 (Counterclockwise)

Preceding gene: 146301109

Following gene: 146301106

Centisome position: 66.04

GC content: 37.19

Gene sequence:

>597_bases
ATGAAAACTACACAAAACAAGAAGGAAACCAAGTCAAAAAATACAACGACAAAGGAAACTGTAAAAAAAGGGGTTACAAA
ACCAAAATCTAACGCAGCCGCGGGCTTGTCAGAATTATTTGAAGACGGGCTAAAAGATATTTACTGGGCAGAGAAAGCGC
TCACAAAAGCATTACCGGCAATGGCAAAAAATGCAACATCGCCAGAATTGATCGATGCAATCAATAATCACTTAACCGAA
ACTGAGGAACAAATAACTCGTTTAGAAAAAGTTTTTGATTTAATTGGAAAAAAAGCAACGGCTAAAAAATGCGATGCAAT
GGAAGGTTTAATCGAAGAAGGAAAAGGAATTCTGGAAGAAACAGAAATAGGAGTAGTTCGTGATGCCGGAATTATTGCGG
CAAGCCAAAAAATAGAACACTACGAAATCGCAACGTATGGAACTTTAAGACAGTTTGCTGAAACACTTGGTTATACTGAA
GCTGTTACTTTACTGGAACAAACACTGGATGAAGAAAAAGGAGCCGATAAATTATTGACAGAAGTTGCTGTAAACGCTGT
AAATCTTGAAGCTGCAGAAGTAGAAATGGAAGAATAA

Upstream 100 bases:

>100_bases
ATTAACAGATGTTTAGAATGAAATTTAATTTGTAAATAGTATAACCCTGCAGATAATAACGGCACTAATTTTACAATATT
AATTATTAAAAAATTATACC

Downstream 100 bases:

>100_bases
CAACCTTCTTACCACATCAAAAGTGCAGTTTAAAAGACTGCACTTTTTTTTCATTAAAAATTTAAAACGAAAGTTATGCC
CGAAGGTCCGTCTATATTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MKTTQNKKETKSKNTTTKETVKKGVTKPKSNAAAGLSELFEDGLKDIYWAEKALTKALPAMAKNATSPELIDAINNHLTE
TEEQITRLEKVFDLIGKKATAKKCDAMEGLIEEGKGILEETEIGVVRDAGIIAASQKIEHYEIATYGTLRQFAETLGYTE
AVTLLEQTLDEEKGADKLLTEVAVNAVNLEAAEVEMEE

Sequences:

>Translated_198_residues
MKTTQNKKETKSKNTTTKETVKKGVTKPKSNAAAGLSELFEDGLKDIYWAEKALTKALPAMAKNATSPELIDAINNHLTE
TEEQITRLEKVFDLIGKKATAKKCDAMEGLIEEGKGILEETEIGVVRDAGIIAASQKIEHYEIATYGTLRQFAETLGYTE
AVTLLEQTLDEEKGADKLLTEVAVNAVNLEAAEVEMEE
>Mature_198_residues
MKTTQNKKETKSKNTTTKETVKKGVTKPKSNAAAGLSELFEDGLKDIYWAEKALTKALPAMAKNATSPELIDAINNHLTE
TEEQITRLEKVFDLIGKKATAKKCDAMEGLIEEGKGILEETEIGVVRDAGIIAASQKIEHYEIATYGTLRQFAETLGYTE
AVTLLEQTLDEEKGADKLLTEVAVNAVNLEAAEVEMEE

Specific function: Unknown

COG id: COG3685

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787512, Length=154, Percent_Identity=48.7012987012987, Blast_Score=136, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010287
- InterPro:   IPR012347
- InterPro:   IPR009078 [H]

Pfam domain/function: PF05974 DUF892 [H]

EC number: NA

Molecular weight: Translated: 21677; Mature: 21677

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTTQNKKETKSKNTTTKETVKKGVTKPKSNAAAGLSELFEDGLKDIYWAEKALTKALPA
CCCCCCHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAKNATSPELIDAINNHLTETEEQITRLEKVFDLIGKKATAKKCDAMEGLIEEGKGILEE
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHH
TEIGVVRDAGIIAASQKIEHYEIATYGTLRQFAETLGYTEAVTLLEQTLDEEKGADKLLT
HHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHH
EVAVNAVNLEAAEVEMEE
HHHHHHHCCHHHHHCCCC
>Mature Secondary Structure
MKTTQNKKETKSKNTTTKETVKKGVTKPKSNAAAGLSELFEDGLKDIYWAEKALTKALPA
CCCCCCHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAKNATSPELIDAINNHLTETEEQITRLEKVFDLIGKKATAKKCDAMEGLIEEGKGILEE
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHH
TEIGVVRDAGIIAASQKIEHYEIATYGTLRQFAETLGYTEAVTLLEQTLDEEKGADKLLT
HHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHH
EVAVNAVNLEAAEVEMEE
HHHHHHHCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3058546; 9097039; 9278503; 8455549 [H]