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The map label for this gene is 146301106

Identifier: 146301106

GI number: 146301106

Start: 4024765

End: 4025496

Strand: Reverse

Name: 146301106

Synonym: Fjoh_3364

Alternate gene names: NA

Gene position: 4025496-4024765 (Counterclockwise)

Preceding gene: 146301107

Following gene: 146301105

Centisome position: 66.03

GC content: 33.61

Gene sequence:

>732_bases
ATGCCCGAAGGTCCGTCTATATTGATTTTAAAAGAAGAAGTACAGCAGTTTGCAGGTAAAAGGATAATTGAAGTTTCTGG
AAACGCCAGTATTGATCTGGAACGTTTACAAGATAAAACGATCTTATCTTTTAAAACCTGGGGAAAGCATTTTTTAATTT
GTTTCGATGATTTTACAATAAGAATTCATTTAATGATGTTTGGAACGTACAGAATCAACGAAAAAAAAGAAACTGCACCA
AGGCTGCATTTGGGATTTTCTAACGGAGAAATCAACTTTTATACCTGTTCCATAAAAGTTTTAGAAGGTGCTGTAGATCA
ATATTACGATTGGAGCGAAGATGTTTTAAATGAAAACTGGAATCCCAAAAAAGCGAAAATAAGCCTTGATAAAATTCCAA
ATGAAAAAATATGCGATGCGATTTTAGATCAAAATATATTTTCGGGAGTAGGGAATATTATTAAAAACGAAGTTTTATAC
CGATGTTTTGTTCACCCGGAATCTTTGGTTGGAAAAATACCGCCAGAGAAGATCGACGAACTTATAGCCGAATGTTCGAT
TTACAGTTTTGAATTTTTGTATTGGAAAAAGAAATTTGAACTCAAAAAACACTGGCTTGCATATTCTCAAAAAGAATGTA
AAAGATGCAGTTTACCGATGATAAAAAAACCGACAGGGAAGAAAAAACGCCGTAGTTTTTTCTGTACCAACTGCCAACAA
CTTCACTCATGA

Upstream 100 bases:

>100_bases
TGCAGAAGTAGAAATGGAAGAATAACAACCTTCTTACCACATCAAAAGTGCAGTTTAAAAGACTGCACTTTTTTTTCATT
AAAAATTTAAAACGAAAGTT

Downstream 100 bases:

>100_bases
AAAATAAAATATTAATAGGATGTTCAAGCTATAATAATCGGTATTGGAAGGGAATTTTCTACCCTGACAATATGACAGCT
AGTGGTATGTTTGAGTTTTA

Product: formamidopyrimidine-DNA glycolase

Products: NA

Alternate protein names: DNA-Formamidopyrimidine Glycosylase; Endonuclease

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MPEGPSILILKEEVQQFAGKRIIEVSGNASIDLERLQDKTILSFKTWGKHFLICFDDFTIRIHLMMFGTYRINEKKETAP
RLHLGFSNGEINFYTCSIKVLEGAVDQYYDWSEDVLNENWNPKKAKISLDKIPNEKICDAILDQNIFSGVGNIIKNEVLY
RCFVHPESLVGKIPPEKIDELIAECSIYSFEFLYWKKKFELKKHWLAYSQKECKRCSLPMIKKPTGKKKRRSFFCTNCQQ
LHS

Sequences:

>Translated_243_residues
MPEGPSILILKEEVQQFAGKRIIEVSGNASIDLERLQDKTILSFKTWGKHFLICFDDFTIRIHLMMFGTYRINEKKETAP
RLHLGFSNGEINFYTCSIKVLEGAVDQYYDWSEDVLNENWNPKKAKISLDKIPNEKICDAILDQNIFSGVGNIIKNEVLY
RCFVHPESLVGKIPPEKIDELIAECSIYSFEFLYWKKKFELKKHWLAYSQKECKRCSLPMIKKPTGKKKRRSFFCTNCQQ
LHS
>Mature_242_residues
PEGPSILILKEEVQQFAGKRIIEVSGNASIDLERLQDKTILSFKTWGKHFLICFDDFTIRIHLMMFGTYRINEKKETAPR
LHLGFSNGEINFYTCSIKVLEGAVDQYYDWSEDVLNENWNPKKAKISLDKIPNEKICDAILDQNIFSGVGNIIKNEVLYR
CFVHPESLVGKIPPEKIDELIAECSIYSFEFLYWKKKFELKKHWLAYSQKECKRCSLPMIKKPTGKKKRRSFFCTNCQQL
HS

Specific function: Unknown

COG id: COG0266

COG function: function code L; Formamidopyrimidine-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI157388969, Length=256, Percent_Identity=25, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI209364530, Length=242, Percent_Identity=25.6198347107438, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI209364526, Length=196, Percent_Identity=27.0408163265306, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI21450800, Length=196, Percent_Identity=27.0408163265306, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI209364528, Length=196, Percent_Identity=27.0408163265306, Blast_Score=72, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28386; Mature: 28255

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: PS51066 ZF_FPG_2 ; PS51068 FPG_CAT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEGPSILILKEEVQQFAGKRIIEVSGNASIDLERLQDKTILSFKTWGKHFLICFDDFTI
CCCCCEEEEEHHHHHHHHCCEEEEECCCCCEEHHHHCCCEEEEEEECCCEEEEEEECCEE
RIHLMMFGTYRINEKKETAPRLHLGFSNGEINFYTCSIKVLEGAVDQYYDWSEDVLNENW
EEEEEEEEEEEECCCCCCCCEEEEEECCCEEEEEEEEEEEEHHHHHHHCCCCHHHHCCCC
NPKKAKISLDKIPNEKICDAILDQNIFSGVGNIIKNEVLYRCFVHPESLVGKIPPEKIDE
CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHCCCCHHHHHH
LIAECSIYSFEFLYWKKKFELKKHWLAYSQKECKRCSLPMIKKPTGKKKRRSFFCTNCQQ
HHHHHHHHEEHEEHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHH
LHS
HCC
>Mature Secondary Structure 
PEGPSILILKEEVQQFAGKRIIEVSGNASIDLERLQDKTILSFKTWGKHFLICFDDFTI
CCCCEEEEEHHHHHHHHCCEEEEECCCCCEEHHHHCCCEEEEEEECCCEEEEEEECCEE
RIHLMMFGTYRINEKKETAPRLHLGFSNGEINFYTCSIKVLEGAVDQYYDWSEDVLNENW
EEEEEEEEEEEECCCCCCCCEEEEEECCCEEEEEEEEEEEEHHHHHHHCCCCHHHHCCCC
NPKKAKISLDKIPNEKICDAILDQNIFSGVGNIIKNEVLYRCFVHPESLVGKIPPEKIDE
CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHCCCCHHHHHH
LIAECSIYSFEFLYWKKKFELKKHWLAYSQKECKRCSLPMIKKPTGKKKRRSFFCTNCQQ
HHHHHHHHEEHEEHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHH
LHS
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA