| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is yecE [C]
Identifier: 146301105
GI number: 146301105
Start: 4024058
End: 4024768
Strand: Reverse
Name: yecE [C]
Synonym: Fjoh_3363
Alternate gene names: 146301105
Gene position: 4024768-4024058 (Counterclockwise)
Preceding gene: 146301106
Following gene: 146301103
Centisome position: 66.01
GC content: 30.52
Gene sequence:
>711_bases ATGAAAAATAAAATATTAATAGGATGTTCAAGCTATAATAATCGGTATTGGAAGGGAATTTTCTACCCTGACAATATGAC AGCTAGTGGTATGTTTGAGTTTTATTACCAGCACTTTAACACGTATGAGTTCAATGGAAGCTTTTATAGGTTTCCAACGC TTAAAGTTTTTACAAACTGGTATAATAAATCGCCGGAAGAGTTCCTTTTTTCGGTAAAAGCGCCCAAAGAAATCACACAT ATTAAACAATTTTCAGACTGTGAAAATCTGATTTCAGAATTTTATAATGTCTGTAAAATGGGTTTAAAAGAAAAGCTCGC TTGTGTATTATTTCAGTTTCCGCCAAGCTATTATTTTACTTTGGAAAGATTACATCATATTATTAAAAATTTAGATTTAA AATTTCAAAATGTAATCGAATTTCGACATGAATCCTGGTGGAATGACACCGTTTGGGATGCTTTTTTAGAAAATAATATT ACGTTTTGCAGTGTAAGCCACCCGCAGTTACCACAGACAATTTTTAAAAATTTTCCGCTGGTTTATATTCGTTTACACGG AACTCCAAAAATGTTTTACTCCAGCTATCCACTTCAAGAATTACTTCATATAAGAGATGAAACTCATTTAAAATCAGGAT TTATATATTTTAATAATACTGCAAGTGAAGCAGGGATTTTAAATGCTTTAGAATTGAAAAATTTAATTTGA
Upstream 100 bases:
>100_bases AAAAAGAATGTAAAAGATGCAGTTTACCGATGATAAAAAAACCGACAGGGAAGAAAAAACGCCGTAGTTTTTTCTGTACC AACTGCCAACAACTTCACTC
Downstream 100 bases:
>100_bases AGATAGATATTTAGCGGCAAAGTTTTTTAACCGCAAAGAGCGCAAAGGTTTACGTAAGGTTCGCAAAGATTAATTCTCTT TGTGACCTTTTATGTAAACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MKNKILIGCSSYNNRYWKGIFYPDNMTASGMFEFYYQHFNTYEFNGSFYRFPTLKVFTNWYNKSPEEFLFSVKAPKEITH IKQFSDCENLISEFYNVCKMGLKEKLACVLFQFPPSYYFTLERLHHIIKNLDLKFQNVIEFRHESWWNDTVWDAFLENNI TFCSVSHPQLPQTIFKNFPLVYIRLHGTPKMFYSSYPLQELLHIRDETHLKSGFIYFNNTASEAGILNALELKNLI
Sequences:
>Translated_236_residues MKNKILIGCSSYNNRYWKGIFYPDNMTASGMFEFYYQHFNTYEFNGSFYRFPTLKVFTNWYNKSPEEFLFSVKAPKEITH IKQFSDCENLISEFYNVCKMGLKEKLACVLFQFPPSYYFTLERLHHIIKNLDLKFQNVIEFRHESWWNDTVWDAFLENNI TFCSVSHPQLPQTIFKNFPLVYIRLHGTPKMFYSSYPLQELLHIRDETHLKSGFIYFNNTASEAGILNALELKNLI >Mature_236_residues MKNKILIGCSSYNNRYWKGIFYPDNMTASGMFEFYYQHFNTYEFNGSFYRFPTLKVFTNWYNKSPEEFLFSVKAPKEITH IKQFSDCENLISEFYNVCKMGLKEKLACVLFQFPPSYYFTLERLHHIIKNLDLKFQNVIEFRHESWWNDTVWDAFLENNI TFCSVSHPQLPQTIFKNFPLVYIRLHGTPKMFYSSYPLQELLHIRDETHLKSGFIYFNNTASEAGILNALELKNLI
Specific function: Unknown
COG id: COG1801
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28222; Mature: 28222
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKILIGCSSYNNRYWKGIFYPDNMTASGMFEFYYQHFNTYEFNGSFYRFPTLKVFTNW CCCCEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEECCCEEECCHHHHHHHH YNKSPEEFLFSVKAPKEITHIKQFSDCENLISEFYNVCKMGLKEKLACVLFQFPPSYYFT HCCCHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHH LERLHHIIKNLDLKFQNVIEFRHESWWNDTVWDAFLENNITFCSVSHPQLPQTIFKNFPL HHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEECCCCCCHHHHHCCCCE VYIRLHGTPKMFYSSYPLQELLHIRDETHLKSGFIYFNNTASEAGILNALELKNLI EEEEECCCHHHHHCCCCHHHHHHHHHHCHHCCCEEEECCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MKNKILIGCSSYNNRYWKGIFYPDNMTASGMFEFYYQHFNTYEFNGSFYRFPTLKVFTNW CCCCEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEECCCEEECCHHHHHHHH YNKSPEEFLFSVKAPKEITHIKQFSDCENLISEFYNVCKMGLKEKLACVLFQFPPSYYFT HCCCHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHH LERLHHIIKNLDLKFQNVIEFRHESWWNDTVWDAFLENNITFCSVSHPQLPQTIFKNFPL HHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEECCCCCCHHHHHCCCCE VYIRLHGTPKMFYSSYPLQELLHIRDETHLKSGFIYFNNTASEAGILNALELKNLI EEEEECCCHHHHHCCCCHHHHHHHHHHCHHCCCEEEECCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA