Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301091

Identifier: 146301091

GI number: 146301091

Start: 4007314

End: 4008435

Strand: Direct

Name: 146301091

Synonym: Fjoh_3349

Alternate gene names: NA

Gene position: 4007314-4008435 (Clockwise)

Preceding gene: 146301085

Following gene: 146301092

Centisome position: 65.73

GC content: 37.88

Gene sequence:

>1122_bases
ATGAAATGCAAAAAACTAATATCAGCCCTTTTTTTATTATCTAGTATTTCTTTTTTCGGTCAGGTTTATACTGAAAAAAT
CGTAGGACAAAAAAACCAAGAGTTAAAAGACAGTCTTAAAGTTGCCGATTATCCTTATGCACTTCCTATCTGGGGAGAAA
AAGTAGCCCAGAAAGGGTACAAACTTCCATATTCTGCCGGGCTTTCCCTAAATTATTTCTGGCAGGATTCTGAAATTATC
ATCAGTAATCTTCAAGTGGGTTTTAATAATGGCCCAATGTATAATTTAGACGAAATTGTACGCTTTGATAAATCTTCTGT
CGAAGCGGGAGCACTAACTATTCGTCCGGATATTTGGCTGCTCCCTTTTTTAAACATCTATGGTATTTTTGGAAAATCAA
ATCCTTCAACAAAAATCAATGCGGGAATTTATATTCCTGATGCTGATAATAATTGGACTGAAATTGCCAATTTTAGTACA
AAAGCAAGTTTCAGCGCTACGACATTTGGTTTTGGGATGACACCTACCATAGGAATTGGCGGCGGGTGGCTCGCACTTGA
TATGAATATGGCCTGGACAGATGTAAGTGCTTTAGATAAACCTGCTTTTTCGTATGTATTTGGCCCTCGTTTAGGAAAGA
CATTTAAACTTCCTAAAGCAGACCAAAATATAGCGGTTTGGGTGGGCGGTTTCAGGGTTCATATTTCCGGAAATACAAAT
GGAAATATTAATTTATCTGATATAATTGATTTATCTACAGCGCAGGCAAAAGTCGACAACGGATTAGATAAGGTTTCTGA
AAATCAGCAAAAAGTCGACACCTGGTGGAGCGGACTAACACCTGCTGAACAAAAAAATCCTGCTAACGCGGCTAAACATA
ATACGGCAAATCGTGCGCTGGAAAGTGCCGGAAATTTTCTATCCACTTTAGATGGGGCTTTGAGCACTGCTGATTCGTCA
TCGATTCAATATTCGCTTCAAAAAAGACCAAAAGATATGTGGAATTTTATTGTAGGTACTCAATACCAACTCAATAAACA
TATCATGTTTAGGGTCGAGGCTGGTTTTCTAGGAACTCGAACACAAGCTTTAGGAGGAATACAATATCGTTTTGGATTAT
AA

Upstream 100 bases:

>100_bases
ACTCCAGTAAGACAAAAAGATAAGCCGAAATTCCTTTCAGAATACATTAGTCCATATTTATTTCAAGCAGTTTTATTTTA
ATCAATTAATACTCTAATCA

Downstream 100 bases:

>100_bases
ATCCTGTTTATGAAAAAAAGTCTAATATTACTTATCGCGGTATTTTCGATACATCAGGCAAAATCTCAGGTTTTGATTTC
TTTGATTTTTGGTGATAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MKCKKLISALFLLSSISFFGQVYTEKIVGQKNQELKDSLKVADYPYALPIWGEKVAQKGYKLPYSAGLSLNYFWQDSEII
ISNLQVGFNNGPMYNLDEIVRFDKSSVEAGALTIRPDIWLLPFLNIYGIFGKSNPSTKINAGIYIPDADNNWTEIANFST
KASFSATTFGFGMTPTIGIGGGWLALDMNMAWTDVSALDKPAFSYVFGPRLGKTFKLPKADQNIAVWVGGFRVHISGNTN
GNINLSDIIDLSTAQAKVDNGLDKVSENQQKVDTWWSGLTPAEQKNPANAAKHNTANRALESAGNFLSTLDGALSTADSS
SIQYSLQKRPKDMWNFIVGTQYQLNKHIMFRVEAGFLGTRTQALGGIQYRFGL

Sequences:

>Translated_373_residues
MKCKKLISALFLLSSISFFGQVYTEKIVGQKNQELKDSLKVADYPYALPIWGEKVAQKGYKLPYSAGLSLNYFWQDSEII
ISNLQVGFNNGPMYNLDEIVRFDKSSVEAGALTIRPDIWLLPFLNIYGIFGKSNPSTKINAGIYIPDADNNWTEIANFST
KASFSATTFGFGMTPTIGIGGGWLALDMNMAWTDVSALDKPAFSYVFGPRLGKTFKLPKADQNIAVWVGGFRVHISGNTN
GNINLSDIIDLSTAQAKVDNGLDKVSENQQKVDTWWSGLTPAEQKNPANAAKHNTANRALESAGNFLSTLDGALSTADSS
SIQYSLQKRPKDMWNFIVGTQYQLNKHIMFRVEAGFLGTRTQALGGIQYRFGL
>Mature_373_residues
MKCKKLISALFLLSSISFFGQVYTEKIVGQKNQELKDSLKVADYPYALPIWGEKVAQKGYKLPYSAGLSLNYFWQDSEII
ISNLQVGFNNGPMYNLDEIVRFDKSSVEAGALTIRPDIWLLPFLNIYGIFGKSNPSTKINAGIYIPDADNNWTEIANFST
KASFSATTFGFGMTPTIGIGGGWLALDMNMAWTDVSALDKPAFSYVFGPRLGKTFKLPKADQNIAVWVGGFRVHISGNTN
GNINLSDIIDLSTAQAKVDNGLDKVSENQQKVDTWWSGLTPAEQKNPANAAKHNTANRALESAGNFLSTLDGALSTADSS
SIQYSLQKRPKDMWNFIVGTQYQLNKHIMFRVEAGFLGTRTQALGGIQYRFGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41111; Mature: 41111

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: PS00539 PYROKININ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCKKLISALFLLSSISFFGQVYTEKIVGQKNQELKDSLKVADYPYALPIWGEKVAQKGY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEECCCCCHHHHHCCC
KLPYSAGLSLNYFWQDSEIIISNLQVGFNNGPMYNLDEIVRFDKSSVEAGALTIRPDIWL
CCCCCCCCEEEEEECCCEEEEEEEEEECCCCCCCCHHHHHHHCCCCCCCCEEEECCCEEE
LPFLNIYGIFGKSNPSTKINAGIYIPDADNNWTEIANFSTKASFSATTFGFGMTPTIGIG
EEHHHHHEEECCCCCCCEEEEEEEEECCCCCHHHHCCCCCCCCCCEEEECCCCCCEEECC
GGWLALDMNMAWTDVSALDKPAFSYVFGPRLGKTFKLPKADQNIAVWVGGFRVHISGNTN
CCEEEEECCCCCCCHHHHCCCCHHEEECCCCCCEEECCCCCCCEEEEEEEEEEEEECCCC
GNINLSDIIDLSTAQAKVDNGLDKVSENQQKVDTWWSGLTPAEQKNPANAAKHNTANRAL
CCEEHHHHEECCHHHHHHHCCHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHCCHHHHHH
ESAGNFLSTLDGALSTADSSSIQYSLQKRPKDMWNFIVGTQYQLNKHIMFRVEAGFLGTR
HHHHHHHHHHHHHHHCCCCCCEEEHHHHCCHHHHHHHCCCEEEECCEEEEEEECCCCCCH
TQALGGIQYRFGL
HHHHCCEEEEECC
>Mature Secondary Structure
MKCKKLISALFLLSSISFFGQVYTEKIVGQKNQELKDSLKVADYPYALPIWGEKVAQKGY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEECCCCCHHHHHCCC
KLPYSAGLSLNYFWQDSEIIISNLQVGFNNGPMYNLDEIVRFDKSSVEAGALTIRPDIWL
CCCCCCCCEEEEEECCCEEEEEEEEEECCCCCCCCHHHHHHHCCCCCCCCEEEECCCEEE
LPFLNIYGIFGKSNPSTKINAGIYIPDADNNWTEIANFSTKASFSATTFGFGMTPTIGIG
EEHHHHHEEECCCCCCCEEEEEEEEECCCCCHHHHCCCCCCCCCCEEEECCCCCCEEECC
GGWLALDMNMAWTDVSALDKPAFSYVFGPRLGKTFKLPKADQNIAVWVGGFRVHISGNTN
CCEEEEECCCCCCCHHHHCCCCHHEEECCCCCCEEECCCCCCCEEEEEEEEEEEEECCCC
GNINLSDIIDLSTAQAKVDNGLDKVSENQQKVDTWWSGLTPAEQKNPANAAKHNTANRAL
CCEEHHHHEECCHHHHHHHCCHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHCCHHHHHH
ESAGNFLSTLDGALSTADSSSIQYSLQKRPKDMWNFIVGTQYQLNKHIMFRVEAGFLGTR
HHHHHHHHHHHHHHHCCCCCCEEEHHHHCCHHHHHHHCCCEEEECCEEEEEEECCCCCCH
TQALGGIQYRFGL
HHHHCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA