| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301092
Identifier: 146301092
GI number: 146301092
Start: 4008445
End: 4009218
Strand: Direct
Name: 146301092
Synonym: Fjoh_3350
Alternate gene names: NA
Gene position: 4008445-4009218 (Clockwise)
Preceding gene: 146301091
Following gene: 146301098
Centisome position: 65.75
GC content: 35.4
Gene sequence:
>774_bases ATGAAAAAAAGTCTAATATTACTTATCGCGGTATTTTCGATACATCAGGCAAAATCTCAGGTTTTGATTTCTTTGATTTT TGGTGATAAACTGAATTCTCCATTTCTGGAATTTGGTCTGGAGGGCGGTCTCAATCTTTCTGATATTTCTGATTTGGAAA GTTCTGGTATGAATCCGGGTTTTAATCTTGGTTTTTATTTTGACATTCGTTCCAAGCAAAATCCGGCTTGGATGATAAAT ACGGGGGTAATCGTAAAATCGCCAATGGGTGCACGCCATATTCCGGTTTATTCTTTAGATGATGTAAACTTAGATAACAC CTTTGCCGGTGGAACTGTTAATAGAGAAATTCGATATTTTAATGTGCCTATTTTAATTAAATATCAGTTTAAAAATAGAA TTTATCTTAAAACAGGACCTCAGCTGGGACTTTTGGCTTCGGCTTTTGATGAGTTTAAAAATGAAGTTAATAAGAATGAT GTTGTTTACAAGAAAAAAATTAGAGATGAAATCAGGGTTATTGATGCCGGAATTGCCTTTGGAACGGGATATCACATGAA TGTAGGCAACGGATTAAATATTACCATTCAATATTATTATGGATTGGTTCCGGTTATGAAAGGCGACGGACCAAATGTTT ACAACAGGTCTTTGTACTTAACTGCAGGAATACCAATTGGAAAAGGAAAAGCAGCGCAGAGACGTGCTGAACAAGATGCA GAATTATATAAAGTTATTCCTCCTGAAGATGAAAGGCCGAAACCTGAAAAATAA
Upstream 100 bases:
>100_bases CAATAAACATATCATGTTTAGGGTCGAGGCTGGTTTTCTAGGAACTCGAACACAAGCTTTAGGAGGAATACAATATCGTT TTGGATTATAAATCCTGTTT
Downstream 100 bases:
>100_bases CTTTAGGTATTGATTGAATTGAGCAGTTCTAATATTTCCTTGTTGTTTAAAACATAATCTGGCTTTGTAAATAAAATAGC ATTATTAGGCATGAAAGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MKKSLILLIAVFSIHQAKSQVLISLIFGDKLNSPFLEFGLEGGLNLSDISDLESSGMNPGFNLGFYFDIRSKQNPAWMIN TGVIVKSPMGARHIPVYSLDDVNLDNTFAGGTVNREIRYFNVPILIKYQFKNRIYLKTGPQLGLLASAFDEFKNEVNKND VVYKKKIRDEIRVIDAGIAFGTGYHMNVGNGLNITIQYYYGLVPVMKGDGPNVYNRSLYLTAGIPIGKGKAAQRRAEQDA ELYKVIPPEDERPKPEK
Sequences:
>Translated_257_residues MKKSLILLIAVFSIHQAKSQVLISLIFGDKLNSPFLEFGLEGGLNLSDISDLESSGMNPGFNLGFYFDIRSKQNPAWMIN TGVIVKSPMGARHIPVYSLDDVNLDNTFAGGTVNREIRYFNVPILIKYQFKNRIYLKTGPQLGLLASAFDEFKNEVNKND VVYKKKIRDEIRVIDAGIAFGTGYHMNVGNGLNITIQYYYGLVPVMKGDGPNVYNRSLYLTAGIPIGKGKAAQRRAEQDA ELYKVIPPEDERPKPEK >Mature_257_residues MKKSLILLIAVFSIHQAKSQVLISLIFGDKLNSPFLEFGLEGGLNLSDISDLESSGMNPGFNLGFYFDIRSKQNPAWMIN TGVIVKSPMGARHIPVYSLDDVNLDNTFAGGTVNREIRYFNVPILIKYQFKNRIYLKTGPQLGLLASAFDEFKNEVNKND VVYKKKIRDEIRVIDAGIAFGTGYHMNVGNGLNITIQYYYGLVPVMKGDGPNVYNRSLYLTAGIPIGKGKAAQRRAEQDA ELYKVIPPEDERPKPEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28728; Mature: 28728
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSLILLIAVFSIHQAKSQVLISLIFGDKLNSPFLEFGLEGGLNLSDISDLESSGMNPG CCCCEEEEEEHHHHHHHHHHEEEEEEECCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCC FNLGFYFDIRSKQNPAWMINTGVIVKSPMGARHIPVYSLDDVNLDNTFAGGTVNREIRYF CCEEEEEEECCCCCCEEEEECCEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEE NVPILIKYQFKNRIYLKTGPQLGLLASAFDEFKNEVNKNDVVYKKKIRDEIRVIDAGIAF ECCEEEEEEECCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHEEEEECCEEE GTGYHMNVGNGLNITIQYYYGLVPVMKGDGPNVYNRSLYLTAGIPIGKGKAAQRRAEQDA CCCEEEECCCCEEEEEEEEECEEEEEECCCCCEECCEEEEEECCCCCCCHHHHHHHHCCC ELYKVIPPEDERPKPEK CEEEECCCCCCCCCCCC >Mature Secondary Structure MKKSLILLIAVFSIHQAKSQVLISLIFGDKLNSPFLEFGLEGGLNLSDISDLESSGMNPG CCCCEEEEEEHHHHHHHHHHEEEEEEECCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCC FNLGFYFDIRSKQNPAWMINTGVIVKSPMGARHIPVYSLDDVNLDNTFAGGTVNREIRYF CCEEEEEEECCCCCCEEEEECCEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEE NVPILIKYQFKNRIYLKTGPQLGLLASAFDEFKNEVNKNDVVYKKKIRDEIRVIDAGIAF ECCEEEEEEECCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHEEEEECCEEE GTGYHMNVGNGLNITIQYYYGLVPVMKGDGPNVYNRSLYLTAGIPIGKGKAAQRRAEQDA CCCEEEECCCCEEEEEEEEECEEEEEECCCCCEECCEEEEEECCCCCCCHHHHHHHHCCC ELYKVIPPEDERPKPEK CEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA