| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301087
Identifier: 146301087
GI number: 146301087
Start: 3997865
End: 3998581
Strand: Reverse
Name: 146301087
Synonym: Fjoh_3343
Alternate gene names: NA
Gene position: 3998581-3997865 (Counterclockwise)
Preceding gene: 146301088
Following gene: 146301086
Centisome position: 65.58
GC content: 26.5
Gene sequence:
>717_bases ATGAATTGGGATAATTATTTATTAGAAGAAAAAGCACCTTATGGAGAATATGCGCATCTAGGTGTGCTTGACGGATCAGT TTTTGGAATTTATGATCTATCAAAAGTTCCAAATGATACAATAGTTTTAGGGTTGTCAACACCGCTTAAAAAATTCAAAA TTAACTACACAAACTTTTCTGCTTTAATTGGAAATGATAAAATAGAAGCTATTACTCTTGACTATCTTGATCAAGAACGC ATTTCAGTTTTTTCAACACTCCCAAATTTAAAATATCTACAAATAAGTATTAATAAACAAGATGAAATTCCAGACTTATC TTCTCTTGAATCAATTGAAGTTTTGATACTTGCCAATATCAAAAAAATCCAAAATATAGACTTTTTAAAAAATATGAAGA ATCTAAAAACACTTTATATTTATGAAATAAATAATCTATACGACTTAACTCCAATTTCAACTATAATAAGTTTAGAAGAA CTTGTAATTGACCATGGAAAAATGAGTGGTACAGGAAAAAGTATTAAAAGTATTAGTCCATTAAAATCATTAACAAATTT AAAATACCTAAGATTAGCTGTCAAAATAGAAGATCAAAGTAGTGATTTAACTGTTTTATATGGATTAAAAAAATTACAAG AAGTTATGTTACTTCCTCGATATTTAAAAAATGATAGCTGGGAACTTTTAAAAGAGCAATTACCGTTAATAAAGTAG
Upstream 100 bases:
>100_bases ATTTGATGAGTTTTGTCTTATTTTAATATAATTATAACTAATACTGGGCATTCTTCTTGTTTAATATAGAGTTATTTGTA GTAACATATTTTAATCAGTT
Downstream 100 bases:
>100_bases TTTCTAAATGAGTTACGTAAAGTATTAAAAAATGGTTTCATCTTATAATATGCAACCTGAGAGACGATGAATTAAAGTGT TGTTTTTGAGTGAAGTAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MNWDNYLLEEKAPYGEYAHLGVLDGSVFGIYDLSKVPNDTIVLGLSTPLKKFKINYTNFSALIGNDKIEAITLDYLDQER ISVFSTLPNLKYLQISINKQDEIPDLSSLESIEVLILANIKKIQNIDFLKNMKNLKTLYIYEINNLYDLTPISTIISLEE LVIDHGKMSGTGKSIKSISPLKSLTNLKYLRLAVKIEDQSSDLTVLYGLKKLQEVMLLPRYLKNDSWELLKEQLPLIK
Sequences:
>Translated_238_residues MNWDNYLLEEKAPYGEYAHLGVLDGSVFGIYDLSKVPNDTIVLGLSTPLKKFKINYTNFSALIGNDKIEAITLDYLDQER ISVFSTLPNLKYLQISINKQDEIPDLSSLESIEVLILANIKKIQNIDFLKNMKNLKTLYIYEINNLYDLTPISTIISLEE LVIDHGKMSGTGKSIKSISPLKSLTNLKYLRLAVKIEDQSSDLTVLYGLKKLQEVMLLPRYLKNDSWELLKEQLPLIK >Mature_238_residues MNWDNYLLEEKAPYGEYAHLGVLDGSVFGIYDLSKVPNDTIVLGLSTPLKKFKINYTNFSALIGNDKIEAITLDYLDQER ISVFSTLPNLKYLQISINKQDEIPDLSSLESIEVLILANIKKIQNIDFLKNMKNLKTLYIYEINNLYDLTPISTIISLEE LVIDHGKMSGTGKSIKSISPLKSLTNLKYLRLAVKIEDQSSDLTVLYGLKKLQEVMLLPRYLKNDSWELLKEQLPLIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27162; Mature: 27162
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWDNYLLEEKAPYGEYAHLGVLDGSVFGIYDLSKVPNDTIVLGLSTPLKKFKINYTNFS CCCCCCHHCCCCCCCCCEEEEEECCCEEEEEECCCCCCCEEEEEECCCCCCEEEECCCEE ALIGNDKIEAITLDYLDQERISVFSTLPNLKYLQISINKQDEIPDLSSLESIEVLILANI EEECCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECH KKIQNIDFLKNMKNLKTLYIYEINNLYDLTPISTIISLEELVIDHGKMSGTGKSIKSISP HHHCCCHHHHHHHCCEEEEEEEECCEEECCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH LKSLTNLKYLRLAVKIEDQSSDLTVLYGLKKLQEVMLLPRYLKNDSWELLKEQLPLIK HHHHHCCEEEEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC >Mature Secondary Structure MNWDNYLLEEKAPYGEYAHLGVLDGSVFGIYDLSKVPNDTIVLGLSTPLKKFKINYTNFS CCCCCCHHCCCCCCCCCEEEEEECCCEEEEEECCCCCCCEEEEEECCCCCCEEEECCCEE ALIGNDKIEAITLDYLDQERISVFSTLPNLKYLQISINKQDEIPDLSSLESIEVLILANI EEECCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECH KKIQNIDFLKNMKNLKTLYIYEINNLYDLTPISTIISLEELVIDHGKMSGTGKSIKSISP HHHCCCHHHHHHHCCEEEEEEEECCEEECCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH LKSLTNLKYLRLAVKIEDQSSDLTVLYGLKKLQEVMLLPRYLKNDSWELLKEQLPLIK HHHHHCCEEEEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA