The gene/protein map for NC_004578 is currently unavailable.
Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146301087

Identifier: 146301087

GI number: 146301087

Start: 3997865

End: 3998581

Strand: Reverse

Name: 146301087

Synonym: Fjoh_3343

Alternate gene names: NA

Gene position: 3998581-3997865 (Counterclockwise)

Preceding gene: 146301088

Following gene: 146301086

Centisome position: 65.58

GC content: 26.5

Gene sequence:

>717_bases
ATGAATTGGGATAATTATTTATTAGAAGAAAAAGCACCTTATGGAGAATATGCGCATCTAGGTGTGCTTGACGGATCAGT
TTTTGGAATTTATGATCTATCAAAAGTTCCAAATGATACAATAGTTTTAGGGTTGTCAACACCGCTTAAAAAATTCAAAA
TTAACTACACAAACTTTTCTGCTTTAATTGGAAATGATAAAATAGAAGCTATTACTCTTGACTATCTTGATCAAGAACGC
ATTTCAGTTTTTTCAACACTCCCAAATTTAAAATATCTACAAATAAGTATTAATAAACAAGATGAAATTCCAGACTTATC
TTCTCTTGAATCAATTGAAGTTTTGATACTTGCCAATATCAAAAAAATCCAAAATATAGACTTTTTAAAAAATATGAAGA
ATCTAAAAACACTTTATATTTATGAAATAAATAATCTATACGACTTAACTCCAATTTCAACTATAATAAGTTTAGAAGAA
CTTGTAATTGACCATGGAAAAATGAGTGGTACAGGAAAAAGTATTAAAAGTATTAGTCCATTAAAATCATTAACAAATTT
AAAATACCTAAGATTAGCTGTCAAAATAGAAGATCAAAGTAGTGATTTAACTGTTTTATATGGATTAAAAAAATTACAAG
AAGTTATGTTACTTCCTCGATATTTAAAAAATGATAGCTGGGAACTTTTAAAAGAGCAATTACCGTTAATAAAGTAG

Upstream 100 bases:

>100_bases
ATTTGATGAGTTTTGTCTTATTTTAATATAATTATAACTAATACTGGGCATTCTTCTTGTTTAATATAGAGTTATTTGTA
GTAACATATTTTAATCAGTT

Downstream 100 bases:

>100_bases
TTTCTAAATGAGTTACGTAAAGTATTAAAAAATGGTTTCATCTTATAATATGCAACCTGAGAGACGATGAATTAAAGTGT
TGTTTTTGAGTGAAGTAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MNWDNYLLEEKAPYGEYAHLGVLDGSVFGIYDLSKVPNDTIVLGLSTPLKKFKINYTNFSALIGNDKIEAITLDYLDQER
ISVFSTLPNLKYLQISINKQDEIPDLSSLESIEVLILANIKKIQNIDFLKNMKNLKTLYIYEINNLYDLTPISTIISLEE
LVIDHGKMSGTGKSIKSISPLKSLTNLKYLRLAVKIEDQSSDLTVLYGLKKLQEVMLLPRYLKNDSWELLKEQLPLIK

Sequences:

>Translated_238_residues
MNWDNYLLEEKAPYGEYAHLGVLDGSVFGIYDLSKVPNDTIVLGLSTPLKKFKINYTNFSALIGNDKIEAITLDYLDQER
ISVFSTLPNLKYLQISINKQDEIPDLSSLESIEVLILANIKKIQNIDFLKNMKNLKTLYIYEINNLYDLTPISTIISLEE
LVIDHGKMSGTGKSIKSISPLKSLTNLKYLRLAVKIEDQSSDLTVLYGLKKLQEVMLLPRYLKNDSWELLKEQLPLIK
>Mature_238_residues
MNWDNYLLEEKAPYGEYAHLGVLDGSVFGIYDLSKVPNDTIVLGLSTPLKKFKINYTNFSALIGNDKIEAITLDYLDQER
ISVFSTLPNLKYLQISINKQDEIPDLSSLESIEVLILANIKKIQNIDFLKNMKNLKTLYIYEINNLYDLTPISTIISLEE
LVIDHGKMSGTGKSIKSISPLKSLTNLKYLRLAVKIEDQSSDLTVLYGLKKLQEVMLLPRYLKNDSWELLKEQLPLIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27162; Mature: 27162

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWDNYLLEEKAPYGEYAHLGVLDGSVFGIYDLSKVPNDTIVLGLSTPLKKFKINYTNFS
CCCCCCHHCCCCCCCCCEEEEEECCCEEEEEECCCCCCCEEEEEECCCCCCEEEECCCEE
ALIGNDKIEAITLDYLDQERISVFSTLPNLKYLQISINKQDEIPDLSSLESIEVLILANI
EEECCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECH
KKIQNIDFLKNMKNLKTLYIYEINNLYDLTPISTIISLEELVIDHGKMSGTGKSIKSISP
HHHCCCHHHHHHHCCEEEEEEEECCEEECCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
LKSLTNLKYLRLAVKIEDQSSDLTVLYGLKKLQEVMLLPRYLKNDSWELLKEQLPLIK
HHHHHCCEEEEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC
>Mature Secondary Structure
MNWDNYLLEEKAPYGEYAHLGVLDGSVFGIYDLSKVPNDTIVLGLSTPLKKFKINYTNFS
CCCCCCHHCCCCCCCCCEEEEEECCCEEEEEECCCCCCCEEEEEECCCCCCEEEECCCEE
ALIGNDKIEAITLDYLDQERISVFSTLPNLKYLQISINKQDEIPDLSSLESIEVLILANI
EEECCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEECH
KKIQNIDFLKNMKNLKTLYIYEINNLYDLTPISTIISLEELVIDHGKMSGTGKSIKSISP
HHHCCCHHHHHHHCCEEEEEEEECCEEECCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
LKSLTNLKYLRLAVKIEDQSSDLTVLYGLKKLQEVMLLPRYLKNDSWELLKEQLPLIK
HHHHHCCEEEEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA