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The map label for this gene is cirA [C]

Identifier: 146301059

GI number: 146301059

Start: 3959010

End: 3961355

Strand: Reverse

Name: cirA [C]

Synonym: Fjoh_3315

Alternate gene names: 146301059

Gene position: 3961355-3959010 (Counterclockwise)

Preceding gene: 146301064

Following gene: 146301058

Centisome position: 64.97

GC content: 34.57

Gene sequence:

>2346_bases
ATGTTTATGTTTCTGGTTGGCTTGTTCTCTGCAAATGCCTGCCCGGTATATATTCATATTGAAGATAATCTCGGAAATCC
AGCCTCAGGCTTCACCATTTTGGTTAATAATAAACCAATGGGAACCAGTAATAATTCAGGTATTCTGGAACTTTCACTTA
CTGATGGAAATTATACAATTGAAATTGTAAAAAATGATCTTATAAAATCCAGACAAACCGTTTCTGTTGCCTGCGGTCAG
GATAATCATTTTACATTTCGTTTAGATTCATCCAACAGTGAATCGGCAAATTTAAAAGAAGTTACCGTTCAAAACAAAAG
CGTAAAAAAACAGATTGAAGAATCTCCTTTTTCAGTTCAGGTTATCGATTTTAAAAAGCAGTATGACAAAGCGGGCGATG
TCGGTGATTTTTTAAACAGAGCTTCTGGAGTAAAAATAAGAACTAATGGAAATATTGGCTCTCAGGTGCAGGTCAATCTT
GGCGGACTTCAGGGCAAAGCGGTTCGTATTTTTAAAGACGGAATCCCAATTGAGTTGTTCGGACATGGTTTCAGCCTTGG
AACAATTCCTGTAAATATGCTTGACCGTGTTGAAATTTACAAAGGTGTTATGCCGGTTTATCTGGCTTCTGATGCATTGG
GCGGAGGCGTTAATCTTGTTACCAGAACTTCTAATAAAGATTTTGCCGAAGTATCGTATGAAGTCGCTTCTTTTAATACA
CATCGCGCTACAGCCAATCTTTATCTTCAAAATAAAAAGAATTTTTACGGAGGTTTTAACGGTTCTTTTAATTATTCTGA
TAATAATTACAAAGTACGTGTTCCAATTGAAAATGTCGAGAGAGATGTAAAACGTTTCCACGACATGACGAGATCTAATT
ACGGAGAAGCATTTATTGGATTAAAAGAAAAATCATGGGCAGATGATATTCGTTTGACCTTAATTTATTCTGATTTCTAC
AAACAGATTCAAAATGATGCTGGAATGGTAAGTGTTTACGGAAAGGCATTTTCAAAAGAACAAAATTATACGGGAATGAT
TAATTATCGTAAGAAGTTTTTTAACGATAAACTAAAGGTTTCTTTTTTAACCAATTACAGTCATTTTAATACCAAGTTTA
TTGATACAACAAGATTGCGTTACAATTGGCTTGGCGAAACTTACAATTTAAAATTTCAGCCGGGAGAGATAAGAACTGGA
AATGACCAGCGAATGAAATTCAATTTTGTTTCATCGAGATTGAATATGGAATATGAACTTTCTGATCGTAACTTTTTAGA
ATTTAGTGAATTATATTATTCTCAAAGAAGAAAAGGGAGCGATCCTCTAGGTGCCGTTTCTATAGTTACCGGTATTGATG
TTTTAACGGTTCCGGCAACGTATCGAAAAGATAATATGGCATTTGCGTGGCGTTCCTTATTTCTGGATAAAAAGCTCGAA
AGCATTGTGGCAGCAAAATACTACCATTATAATGCAGAAGGCTACACAACTGACAAATTTGGTTTTGCGTGGCAATCCTC
AAAAGAAGACAGCCAGTTTGGATATTTGGGAGGGTTGAAATGGGAGCAAAATAATTATCTATTGAAATTTTCTTATGAAT
ATGCCACACGTCTTCCAGATGAATACGAGATTTTTGGAGATGCCAGACTGGTTAAAGAAAACTTAGATCTTAATCCTGAA
AAAAGCCATAATCTAAATTTAAGCGGTCAGTATTCGATACTCAAAGAAAACAGCAGTTTAACCTTTTCGGCTAATTTATT
CTACAGAAAAGTACAGGATATTATCTTTTTACAGCTTGATATTCCGTTTAACCGATACATCAATTATGAGAATTCTACAG
TAAAAGGTTTTGAGTTTGAAACTAATTATGCTCCAGTAAAATGGCTGAACATAGGGTTTAATATGACCTATCAGGACCTT
CGAAGAATTGAGAGTGAGTCTAGATATGCATACTTAAATGATTCGAGAGTTCCTAATATTCCGTTTTTGTTTGGAAACTT
TTGGGCAAATACTTTTTTCAAAAATGTTTTCAAAAATGAGGACAGTCTAAATTTTACCTGGAATGCCAATTATACCCATA
GATTTTTCTTAGTAGAAATACCAAAAAGTCAGGAACCCTCTTTATTTGGTCCGGTAAAAGATTTTCAAACTTCATTAATT
ATTCCTGATGACGGCAGAATAGGACAGTTTTCTAATGATGTTGGAGTTTATTATCATTTTGCCGATAAAAAAACAACGGT
TTCAGCAGAATGCAGGAATGTTGGAGATGTACGACTGTATGACAACTTTAATGTACAGAGACCCGGAAGATCATTCCACC
TTAAGTTAGTTTATAATTTTTTTTAA

Upstream 100 bases:

>100_bases
TTTCATAAATGCATCCATCGGTAATCAAATACTTTTGCACTGCAAATATAATTTATAATAAGTTTAAATAAAAACAGCTT
TGACATTTAAATTAAACCTT

Downstream 100 bases:

>100_bases
ATAAAACCAATAAATCAGATCAACTATGAAAAGAAGCAACTCACTTCGTTCAGTACTGGCAGTAATCGCTGCTTGTATGC
TTTTATTTTCTTGCAGCAGC

Product: TonB-dependent receptor, plug

Products: NA

Alternate protein names: NB-Dependent Receptor; NB-Linked Outer Membrane Receptor; NB-Dependent Outer Membrane Receptor Protein; NB Family Protein; NB Dependent Receptor; NB-Dependent Outer Membrane Receptor; NB Dependent/Ligand-Gated Channel; Outer Membrane Cobalamin Receptor Protein; Nb-Dependent Receptor; NB-Linked Outer Membrane Receptor P; Mxch Protein; Nb-Dependent Receptor Plug

Number of amino acids: Translated: 781; Mature: 781

Protein sequence:

>781_residues
MFMFLVGLFSANACPVYIHIEDNLGNPASGFTILVNNKPMGTSNNSGILELSLTDGNYTIEIVKNDLIKSRQTVSVACGQ
DNHFTFRLDSSNSESANLKEVTVQNKSVKKQIEESPFSVQVIDFKKQYDKAGDVGDFLNRASGVKIRTNGNIGSQVQVNL
GGLQGKAVRIFKDGIPIELFGHGFSLGTIPVNMLDRVEIYKGVMPVYLASDALGGGVNLVTRTSNKDFAEVSYEVASFNT
HRATANLYLQNKKNFYGGFNGSFNYSDNNYKVRVPIENVERDVKRFHDMTRSNYGEAFIGLKEKSWADDIRLTLIYSDFY
KQIQNDAGMVSVYGKAFSKEQNYTGMINYRKKFFNDKLKVSFLTNYSHFNTKFIDTTRLRYNWLGETYNLKFQPGEIRTG
NDQRMKFNFVSSRLNMEYELSDRNFLEFSELYYSQRRKGSDPLGAVSIVTGIDVLTVPATYRKDNMAFAWRSLFLDKKLE
SIVAAKYYHYNAEGYTTDKFGFAWQSSKEDSQFGYLGGLKWEQNNYLLKFSYEYATRLPDEYEIFGDARLVKENLDLNPE
KSHNLNLSGQYSILKENSSLTFSANLFYRKVQDIIFLQLDIPFNRYINYENSTVKGFEFETNYAPVKWLNIGFNMTYQDL
RRIESESRYAYLNDSRVPNIPFLFGNFWANTFFKNVFKNEDSLNFTWNANYTHRFFLVEIPKSQEPSLFGPVKDFQTSLI
IPDDGRIGQFSNDVGVYYHFADKKTTVSAECRNVGDVRLYDNFNVQRPGRSFHLKLVYNFF

Sequences:

>Translated_781_residues
MFMFLVGLFSANACPVYIHIEDNLGNPASGFTILVNNKPMGTSNNSGILELSLTDGNYTIEIVKNDLIKSRQTVSVACGQ
DNHFTFRLDSSNSESANLKEVTVQNKSVKKQIEESPFSVQVIDFKKQYDKAGDVGDFLNRASGVKIRTNGNIGSQVQVNL
GGLQGKAVRIFKDGIPIELFGHGFSLGTIPVNMLDRVEIYKGVMPVYLASDALGGGVNLVTRTSNKDFAEVSYEVASFNT
HRATANLYLQNKKNFYGGFNGSFNYSDNNYKVRVPIENVERDVKRFHDMTRSNYGEAFIGLKEKSWADDIRLTLIYSDFY
KQIQNDAGMVSVYGKAFSKEQNYTGMINYRKKFFNDKLKVSFLTNYSHFNTKFIDTTRLRYNWLGETYNLKFQPGEIRTG
NDQRMKFNFVSSRLNMEYELSDRNFLEFSELYYSQRRKGSDPLGAVSIVTGIDVLTVPATYRKDNMAFAWRSLFLDKKLE
SIVAAKYYHYNAEGYTTDKFGFAWQSSKEDSQFGYLGGLKWEQNNYLLKFSYEYATRLPDEYEIFGDARLVKENLDLNPE
KSHNLNLSGQYSILKENSSLTFSANLFYRKVQDIIFLQLDIPFNRYINYENSTVKGFEFETNYAPVKWLNIGFNMTYQDL
RRIESESRYAYLNDSRVPNIPFLFGNFWANTFFKNVFKNEDSLNFTWNANYTHRFFLVEIPKSQEPSLFGPVKDFQTSLI
IPDDGRIGQFSNDVGVYYHFADKKTTVSAECRNVGDVRLYDNFNVQRPGRSFHLKLVYNFF
>Mature_781_residues
MFMFLVGLFSANACPVYIHIEDNLGNPASGFTILVNNKPMGTSNNSGILELSLTDGNYTIEIVKNDLIKSRQTVSVACGQ
DNHFTFRLDSSNSESANLKEVTVQNKSVKKQIEESPFSVQVIDFKKQYDKAGDVGDFLNRASGVKIRTNGNIGSQVQVNL
GGLQGKAVRIFKDGIPIELFGHGFSLGTIPVNMLDRVEIYKGVMPVYLASDALGGGVNLVTRTSNKDFAEVSYEVASFNT
HRATANLYLQNKKNFYGGFNGSFNYSDNNYKVRVPIENVERDVKRFHDMTRSNYGEAFIGLKEKSWADDIRLTLIYSDFY
KQIQNDAGMVSVYGKAFSKEQNYTGMINYRKKFFNDKLKVSFLTNYSHFNTKFIDTTRLRYNWLGETYNLKFQPGEIRTG
NDQRMKFNFVSSRLNMEYELSDRNFLEFSELYYSQRRKGSDPLGAVSIVTGIDVLTVPATYRKDNMAFAWRSLFLDKKLE
SIVAAKYYHYNAEGYTTDKFGFAWQSSKEDSQFGYLGGLKWEQNNYLLKFSYEYATRLPDEYEIFGDARLVKENLDLNPE
KSHNLNLSGQYSILKENSSLTFSANLFYRKVQDIIFLQLDIPFNRYINYENSTVKGFEFETNYAPVKWLNIGFNMTYQDL
RRIESESRYAYLNDSRVPNIPFLFGNFWANTFFKNVFKNEDSLNFTWNANYTHRFFLVEIPKSQEPSLFGPVKDFQTSLI
IPDDGRIGQFSNDVGVYYHFADKKTTVSAECRNVGDVRLYDNFNVQRPGRSFHLKLVYNFF

Specific function: Not Yet Known. Postulated To Participate In Iron Transport. Outer Membrane Receptor For Colicins Ia And Ib. [C]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 89883; Mature: 89883

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFMFLVGLFSANACPVYIHIEDNLGNPASGFTILVNNKPMGTSNNSGILELSLTDGNYTI
CEEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCEEE
EIVKNDLIKSRQTVSVACGQDNHFTFRLDSSNSESANLKEVTVQNKSVKKQIEESPFSVQ
EEEECHHHCCCCEEEEEECCCCEEEEEECCCCCCCCCEEEEEECCHHHHHHHHCCCCEEE
VIDFKKQYDKAGDVGDFLNRASGVKIRTNGNIGSQVQVNLGGLQGKAVRIFKDGIPIELF
EEEEHHHCCCCCCHHHHHHHCCCEEEEECCCCCCEEEEEECCCCCCEEEEEECCCCEEEE
GHGFSLGTIPVNMLDRVEIYKGVMPVYLASDALGGGVNLVTRTSNKDFAEVSYEVASFNT
ECCEEEECCCHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCCCHHHEEEEEECCCC
HRATANLYLQNKKNFYGGFNGSFNYSDNNYKVRVPIENVERDVKRFHDMTRSNYGEAFIG
CEEEEEEEEECCCCCCCCCCCEEECCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCEEEE
LKEKSWADDIRLTLIYSDFYKQIQNDAGMVSVYGKAFSKEQNYTGMINYRKKFFNDKLKV
ECCCCCCCCEEEEEEEHHHHHHHHCCCCEEEEECHHHCCCCCCEEEEEEHHHHCCCCEEE
SFLTNYSHFNTKFIDTTRLRYNWLGETYNLKFQPGEIRTGNDQRMKFNFVSSRLNMEYEL
EEEECCCCCCEEEEEEEEEEEEECCCEEEEEECCCCEECCCCCEEEEEEEHHHCCEEEEE
SDRNFLEFSELYYSQRRKGSDPLGAVSIVTGIDVLTVPATYRKDNMAFAWRSLFLDKKLE
CCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEECCCCCCCCHHHHHHHHHHHHHHH
SIVAAKYYHYNAEGYTTDKFGFAWQSSKEDSQFGYLGGLKWEQNNYLLKFSYEYATRLPD
HHHEEEEEEECCCCEEECCCCEEECCCCCCCCCEEECCEEECCCCEEEEEEEHHHHCCCC
EYEIFGDARLVKENLDLNPEKSHNLNLSGQYSILKENSSLTFSANLFYRKVQDIIFLQLD
CEEEECCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEHHHHHEECEEEEEEEE
IPFNRYINYENSTVKGFEFETNYAPVKWLNIGFNMTYQDLRRIESESRYAYLNDSRVPNI
CCHHHEEECCCCEEEEEEEECCCCCEEEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCC
PFLFGNFWANTFFKNVFKNEDSLNFTWNANYTHRFFLVEIPKSQEPSLFGPVKDFQTSLI
CEEEHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCHHHCCEEEE
IPDDGRIGQFSNDVGVYYHFADKKTTVSAECRNVGDVRLYDNFNVQRPGRSFHLKLVYNF
ECCCCCCCCCCCCCEEEEEECCCCEEEEHHHCCCCCEEEEECCCCCCCCCEEEEEEEEEC
F
C
>Mature Secondary Structure
MFMFLVGLFSANACPVYIHIEDNLGNPASGFTILVNNKPMGTSNNSGILELSLTDGNYTI
CEEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCEEE
EIVKNDLIKSRQTVSVACGQDNHFTFRLDSSNSESANLKEVTVQNKSVKKQIEESPFSVQ
EEEECHHHCCCCEEEEEECCCCEEEEEECCCCCCCCCEEEEEECCHHHHHHHHCCCCEEE
VIDFKKQYDKAGDVGDFLNRASGVKIRTNGNIGSQVQVNLGGLQGKAVRIFKDGIPIELF
EEEEHHHCCCCCCHHHHHHHCCCEEEEECCCCCCEEEEEECCCCCCEEEEEECCCCEEEE
GHGFSLGTIPVNMLDRVEIYKGVMPVYLASDALGGGVNLVTRTSNKDFAEVSYEVASFNT
ECCEEEECCCHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCCCHHHEEEEEECCCC
HRATANLYLQNKKNFYGGFNGSFNYSDNNYKVRVPIENVERDVKRFHDMTRSNYGEAFIG
CEEEEEEEEECCCCCCCCCCCEEECCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCEEEE
LKEKSWADDIRLTLIYSDFYKQIQNDAGMVSVYGKAFSKEQNYTGMINYRKKFFNDKLKV
ECCCCCCCCEEEEEEEHHHHHHHHCCCCEEEEECHHHCCCCCCEEEEEEHHHHCCCCEEE
SFLTNYSHFNTKFIDTTRLRYNWLGETYNLKFQPGEIRTGNDQRMKFNFVSSRLNMEYEL
EEEECCCCCCEEEEEEEEEEEEECCCEEEEEECCCCEECCCCCEEEEEEEHHHCCEEEEE
SDRNFLEFSELYYSQRRKGSDPLGAVSIVTGIDVLTVPATYRKDNMAFAWRSLFLDKKLE
CCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEECCCCCCCCHHHHHHHHHHHHHHH
SIVAAKYYHYNAEGYTTDKFGFAWQSSKEDSQFGYLGGLKWEQNNYLLKFSYEYATRLPD
HHHEEEEEEECCCCEEECCCCEEECCCCCCCCCEEECCEEECCCCEEEEEEEHHHHCCCC
EYEIFGDARLVKENLDLNPEKSHNLNLSGQYSILKENSSLTFSANLFYRKVQDIIFLQLD
CEEEECCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEHHHHHEECEEEEEEEE
IPFNRYINYENSTVKGFEFETNYAPVKWLNIGFNMTYQDLRRIESESRYAYLNDSRVPNI
CCHHHEEECCCCEEEEEEEECCCCCEEEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCC
PFLFGNFWANTFFKNVFKNEDSLNFTWNANYTHRFFLVEIPKSQEPSLFGPVKDFQTSLI
CEEEHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCHHHCCEEEE
IPDDGRIGQFSNDVGVYYHFADKKTTVSAECRNVGDVRLYDNFNVQRPGRSFHLKLVYNF
ECCCCCCCCCCCCCEEEEEECCCCEEEEHHHCCCCCEEEEECCCCCCCCCEEEEEEEEEC
F
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA