| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is fhuA [H]
Identifier: 146301064
GI number: 146301064
Start: 3965347
End: 3967770
Strand: Reverse
Name: fhuA [H]
Synonym: Fjoh_3320
Alternate gene names: 146301064
Gene position: 3967770-3965347 (Counterclockwise)
Preceding gene: 146301066
Following gene: 146301059
Centisome position: 65.08
GC content: 36.8
Gene sequence:
>2424_bases ATGAGCATGTCTATTATTAAGAAAATCTGCTTTTTTATAGTTCTTTTAACATCATTTACTATGATGAGCCAGGAATTAGG AAAAGTGAGCGGAAAAGTTGCTTTAAGCGGAAATGAACCCTTAGAAGGTATTTCGGTAGTTCTTAAAGGAACCAAACATT CGTCTGTTACCAATGCAAACGGTCAATATGAAATTAGAAATGTAAAACCAGGTTCTTACACAATTAGTGTTCGTTCAGTA GGTATTCGTCCGCTTGAAGATGCAATTGTTGTTACAGCAAAACAAACTACAGTAAAAAACTTTTCACTTTCTGAAACTCA GGAAGATCTTGATGAAGTAGTAATTACAAAAAATAAGTACAAACAAGATAAGCCGTCGTTGTCATTGCGTCTTCAGACTC CTGTTCTTGAAATTCCTCAAAATATTCAAATTGTAAGTGCACAAACACTAAAAGACCAGCAGATTACAAGTATGAGTGAC GGTGTTATTCGTAACGTAAGTGGTGCTGTACGTTTAGAACACTGGGGAGATTTGTATACCAATATTACGATGCGTGGTAC TCAGATTCAGGCTTTCCGTAACGGATTTAATGTGGTATCTTCTTTCTGGGGACCTTTAACAGAGGATATGAGTTTTGTAG ATCATATCGAGTTTGTAAAAGGACCTGCAGGATTCATGCTTTCGAGCGGTGATCCAAGCGGACTTTATAATGTAGTAACT AAAAAGCCTACCGGAATTTCAAAAGGTGAGGTTACGGCAACTGTAGGAAGCTATGATTTTTACAGAGTGAGCCTTGATCT TGACGGAAAACTGGATAAAGCCGGAAAACTGCTTTACAGATTTAATGGGGCAGCTCAAAAGAAAAGATCTCATCGTCCGT TTGAACACAATGACCGTTATGTAATTGCTCCTGTAATTTCATATCAAATTGATGATAAAACAAAAATTACAGCTGAATAT AATTTTCAATATGCTAACATGACTGAGGTTGGTTCTTATTATGTTTTTGGACCTCAAGCCGGCGGTTATGCAGCTTTACC GCGTAATTTTACAATGACTCAGCCAGGATTACCTGATACTAATATTCAGGATCACAGTGGTTATTTGCAATTTGAACATA AATTTGATGATAACTGGAAACTAACAGCTCAGACTTCATATTTTAAATATATCCAGCAGGGATATAGTTCATGGCCTGGT GTTGTAGGTCCCGGACCAGCCGACAGAGATTTTGACGGTACACCAGAAGGTAATCTTGCTTATGGTGAAATTATTAGAAA CGTGGGTATCTGGGATGCTGAAAGTAATATGTATTTAGGACAGATTTTCGTTAACGGAAAATTTAAAACAGGTGCTGTCT CTCACAAAATATTGGGAGGAATTGATTTAGGAAATAAAGATTATATGGCAGACTGGGGACAATCTCATGATCTTGATACT GTAGATAATCCTTTTAATGTATATAATCCAAATTATGGAACTCCATCAAATGGTTTTCCGGCTTTTGATCATGAAACGCC GCTCAGCCAGAGAGCAGGAGGAATTATGAGTTCAGAATATGCTGCAGGTTATATTCAGGATGAACTGGGTTTCTTTGAAA ACAGATTAAGATTGACTCTTGCTGCAAGATATACATGGTTAAGCCAATCGAGCTGGGGAGATACACAGGAAGATACCCAT ATTACACCTCGTGCCGGACTTAGTTTTTCTATAGATTCAAATACAAGTGTTTACGGATTATACGATCAGGCATTTATTCC TCAATCGGGAATTACTCAAAATGGAGATCCTATAAAACCGCTTACAGGAAATAATCTGGAGTTTGGTATTAAAAGAGACT GGTTTGACGGATCATGGAATACTACACTTTCGGCTTATAGAATTACCAAGAAAAATGAGCTTACATCTGATCCAAAAAAT GGACCTAATGATATTTATAAAGTTATTTTGGGAGAAAAAAGAGCTGAAGGTATTGAATTTGATGTTAGAGGAAAAATCAT TGACGGCTTAAATGTAATTGCTAATTATGCTTTTACAGAATCTATTGTGACCTCTTCTAATGTTCCAACTATTGCTGCAG GTTCTACAGTTCCCGGATATGCAAAACATACAGCAAATGCATGGTTAAATTATACAATACAAAGCGGTAAATTAAAAGGT TTTGGAGCTTCTATTGGAGGAACTGGTCTGGTAGGCCGTCAGACTGATACTTGGAGTGTAGGTCTTGAAAGACTTCCAAA CTATTTTAAATTAGATGGAGGTTTGTCTTATGAAACAGGGAAAATTAAAGTTACGGCAAACGTATTTAATATTTTAGATA AGTATTTATACAGCGGTTCTTACTATGAGTGGCTGCAGGCTTATTACTGGCAGACAGAAGCGCCAAGAAACTTTAGAGTT GGCGTGACATACAAATTGTTTTAA
Upstream 100 bases:
>100_bases AGCAGTTTTTAATTATATTTATTTAGAATGAATTAAAATAATTTGGAAAACAAAATATTTGAATCTACTTTTGCCCAACA AAACTTAAAATTTTACTAAA
Downstream 100 bases:
>100_bases TTTTAAGACAATCATATAAAAAAAGCATCCGCTGATAACGGATGCTTTTTTTATATAGGTTCAAAGGTTCATAGAGACAA AGGCTCAAAGTTTTTTAATT
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: Ferric hydroxamate receptor; Ferric hydroxamate uptake [H]
Number of amino acids: Translated: 807; Mature: 806
Protein sequence:
>807_residues MSMSIIKKICFFIVLLTSFTMMSQELGKVSGKVALSGNEPLEGISVVLKGTKHSSVTNANGQYEIRNVKPGSYTISVRSV GIRPLEDAIVVTAKQTTVKNFSLSETQEDLDEVVITKNKYKQDKPSLSLRLQTPVLEIPQNIQIVSAQTLKDQQITSMSD GVIRNVSGAVRLEHWGDLYTNITMRGTQIQAFRNGFNVVSSFWGPLTEDMSFVDHIEFVKGPAGFMLSSGDPSGLYNVVT KKPTGISKGEVTATVGSYDFYRVSLDLDGKLDKAGKLLYRFNGAAQKKRSHRPFEHNDRYVIAPVISYQIDDKTKITAEY NFQYANMTEVGSYYVFGPQAGGYAALPRNFTMTQPGLPDTNIQDHSGYLQFEHKFDDNWKLTAQTSYFKYIQQGYSSWPG VVGPGPADRDFDGTPEGNLAYGEIIRNVGIWDAESNMYLGQIFVNGKFKTGAVSHKILGGIDLGNKDYMADWGQSHDLDT VDNPFNVYNPNYGTPSNGFPAFDHETPLSQRAGGIMSSEYAAGYIQDELGFFENRLRLTLAARYTWLSQSSWGDTQEDTH ITPRAGLSFSIDSNTSVYGLYDQAFIPQSGITQNGDPIKPLTGNNLEFGIKRDWFDGSWNTTLSAYRITKKNELTSDPKN GPNDIYKVILGEKRAEGIEFDVRGKIIDGLNVIANYAFTESIVTSSNVPTIAAGSTVPGYAKHTANAWLNYTIQSGKLKG FGASIGGTGLVGRQTDTWSVGLERLPNYFKLDGGLSYETGKIKVTANVFNILDKYLYSGSYYEWLQAYYWQTEAPRNFRV GVTYKLF
Sequences:
>Translated_807_residues MSMSIIKKICFFIVLLTSFTMMSQELGKVSGKVALSGNEPLEGISVVLKGTKHSSVTNANGQYEIRNVKPGSYTISVRSV GIRPLEDAIVVTAKQTTVKNFSLSETQEDLDEVVITKNKYKQDKPSLSLRLQTPVLEIPQNIQIVSAQTLKDQQITSMSD GVIRNVSGAVRLEHWGDLYTNITMRGTQIQAFRNGFNVVSSFWGPLTEDMSFVDHIEFVKGPAGFMLSSGDPSGLYNVVT KKPTGISKGEVTATVGSYDFYRVSLDLDGKLDKAGKLLYRFNGAAQKKRSHRPFEHNDRYVIAPVISYQIDDKTKITAEY NFQYANMTEVGSYYVFGPQAGGYAALPRNFTMTQPGLPDTNIQDHSGYLQFEHKFDDNWKLTAQTSYFKYIQQGYSSWPG VVGPGPADRDFDGTPEGNLAYGEIIRNVGIWDAESNMYLGQIFVNGKFKTGAVSHKILGGIDLGNKDYMADWGQSHDLDT VDNPFNVYNPNYGTPSNGFPAFDHETPLSQRAGGIMSSEYAAGYIQDELGFFENRLRLTLAARYTWLSQSSWGDTQEDTH ITPRAGLSFSIDSNTSVYGLYDQAFIPQSGITQNGDPIKPLTGNNLEFGIKRDWFDGSWNTTLSAYRITKKNELTSDPKN GPNDIYKVILGEKRAEGIEFDVRGKIIDGLNVIANYAFTESIVTSSNVPTIAAGSTVPGYAKHTANAWLNYTIQSGKLKG FGASIGGTGLVGRQTDTWSVGLERLPNYFKLDGGLSYETGKIKVTANVFNILDKYLYSGSYYEWLQAYYWQTEAPRNFRV GVTYKLF >Mature_806_residues SMSIIKKICFFIVLLTSFTMMSQELGKVSGKVALSGNEPLEGISVVLKGTKHSSVTNANGQYEIRNVKPGSYTISVRSVG IRPLEDAIVVTAKQTTVKNFSLSETQEDLDEVVITKNKYKQDKPSLSLRLQTPVLEIPQNIQIVSAQTLKDQQITSMSDG VIRNVSGAVRLEHWGDLYTNITMRGTQIQAFRNGFNVVSSFWGPLTEDMSFVDHIEFVKGPAGFMLSSGDPSGLYNVVTK KPTGISKGEVTATVGSYDFYRVSLDLDGKLDKAGKLLYRFNGAAQKKRSHRPFEHNDRYVIAPVISYQIDDKTKITAEYN FQYANMTEVGSYYVFGPQAGGYAALPRNFTMTQPGLPDTNIQDHSGYLQFEHKFDDNWKLTAQTSYFKYIQQGYSSWPGV VGPGPADRDFDGTPEGNLAYGEIIRNVGIWDAESNMYLGQIFVNGKFKTGAVSHKILGGIDLGNKDYMADWGQSHDLDTV DNPFNVYNPNYGTPSNGFPAFDHETPLSQRAGGIMSSEYAAGYIQDELGFFENRLRLTLAARYTWLSQSSWGDTQEDTHI TPRAGLSFSIDSNTSVYGLYDQAFIPQSGITQNGDPIKPLTGNNLEFGIKRDWFDGSWNTTLSAYRITKKNELTSDPKNG PNDIYKVILGEKRAEGIEFDVRGKIIDGLNVIANYAFTESIVTSSNVPTIAAGSTVPGYAKHTANAWLNYTIQSGKLKGF GASIGGTGLVGRQTDTWSVGLERLPNYFKLDGGLSYETGKIKVTANVFNILDKYLYSGSYYEWLQAYYWQTEAPRNFRVG VTYKLF
Specific function: This receptor binds the ferrichrome-iron ligand. It interacts with the tonB protein, which is responsible for energy coupling of the ferrichrome-promoted iron transport system. Acts as a receptor for bacteriophage T5 as well as T1, phi80 and colicin M. Bi
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=742, Percent_Identity=23.8544474393531, Blast_Score=177, Evalue=2e-45, Organism=Escherichia coli, GI1787344, Length=590, Percent_Identity=27.7966101694915, Blast_Score=156, Evalue=6e-39, Organism=Escherichia coli, GI1787024, Length=764, Percent_Identity=21.9895287958115, Blast_Score=89, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 89520; Mature: 89389
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMSIIKKICFFIVLLTSFTMMSQELGKVSGKVALSGNEPLEGISVVLKGTKHSSVTNAN CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEECCCCCCEECCC GQYEIRNVKPGSYTISVRSVGIRPLEDAIVVTAKQTTVKNFSLSETQEDLDEVVITKNKY CEEEEEEECCCCEEEEEEECCCCCCCCEEEEEEECCEECCCCCHHHHHHHHHEEECCCCC KQDKPSLSLRLQTPVLEIPQNIQIVSAQTLKDQQITSMSDGVIRNVSGAVRLEHWGDLYT CCCCCCEEEEEECCHHHCCCCEEEEEECCCCCHHHHCCCCCHHCCCCCEEEEEECCCEEE NITMRGTQIQAFRNGFNVVSSFWGPLTEDMSFVDHIEFVKGPAGFMLSSGDPSGLYNVVT EEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEE KKPTGISKGEVTATVGSYDFYRVSLDLDGKLDKAGKLLYRFNGAAQKKRSHRPFEHNDRY CCCCCCCCCCEEEEECCCEEEEEEEECCCCCCCCCEEEEEECCHHHHHHCCCCCCCCCCE VIAPVISYQIDDKTKITAEYNFQYANMTEVGSYYVFGPQAGGYAALPRNFTMTQPGLPDT EEEEEEEEEECCCEEEEEEEEEEECCHHHCCCEEEECCCCCCEEECCCCCEECCCCCCCC NIQDHSGYLQFEHKFDDNWKLTAQTSYFKYIQQGYSSWPGVVGPGPADRDFDGTPEGNLA CCCCCCCEEEEEEECCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH YGEIIRNVGIWDAESNMYLGQIFVNGKFKTGAVSHKILGGIDLGNKDYMADWGQSHDLDT HHHHHHHCCCEECCCCEEEEEEEEECCCCCCCCCHHEEECEECCCCCCHHCCCCCCCCCC VDNPFNVYNPNYGTPSNGFPAFDHETPLSQRAGGIMSSEYAAGYIQDELGFFENRLRLTL CCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHCCEEEEE AARYTWLSQSSWGDTQEDTHITPRAGLSFSIDSNTSVYGLYDQAFIPQSGITQNGDPIKP EEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCC LTGNNLEFGIKRDWFDGSWNTTLSAYRITKKNELTSDPKNGPNDIYKVILGEKRAEGIEF CCCCCEEECEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCEE DVRGKIIDGLNVIANYAFTESIVTSSNVPTIAAGSTVPGYAKHTANAWLNYTIQSGKLKG EECCEEECCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHCCCCEEEEEEECCCEEE FGASIGGTGLVGRQTDTWSVGLERLPNYFKLDGGLSYETGKIKVTANVFNILDKYLYSGS ECCCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCEEECCEEEEEHHHHHHHHHHHHCCC YYEWLQAYYWQTEAPRNFRVGVTYKLF HHHHHHHHHCCCCCCCCEEEEEEEEEC >Mature Secondary Structure SMSIIKKICFFIVLLTSFTMMSQELGKVSGKVALSGNEPLEGISVVLKGTKHSSVTNAN CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEECCCCCCEECCC GQYEIRNVKPGSYTISVRSVGIRPLEDAIVVTAKQTTVKNFSLSETQEDLDEVVITKNKY CEEEEEEECCCCEEEEEEECCCCCCCCEEEEEEECCEECCCCCHHHHHHHHHEEECCCCC KQDKPSLSLRLQTPVLEIPQNIQIVSAQTLKDQQITSMSDGVIRNVSGAVRLEHWGDLYT CCCCCCEEEEEECCHHHCCCCEEEEEECCCCCHHHHCCCCCHHCCCCCEEEEEECCCEEE NITMRGTQIQAFRNGFNVVSSFWGPLTEDMSFVDHIEFVKGPAGFMLSSGDPSGLYNVVT EEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEE KKPTGISKGEVTATVGSYDFYRVSLDLDGKLDKAGKLLYRFNGAAQKKRSHRPFEHNDRY CCCCCCCCCCEEEEECCCEEEEEEEECCCCCCCCCEEEEEECCHHHHHHCCCCCCCCCCE VIAPVISYQIDDKTKITAEYNFQYANMTEVGSYYVFGPQAGGYAALPRNFTMTQPGLPDT EEEEEEEEEECCCEEEEEEEEEEECCHHHCCCEEEECCCCCCEEECCCCCEECCCCCCCC NIQDHSGYLQFEHKFDDNWKLTAQTSYFKYIQQGYSSWPGVVGPGPADRDFDGTPEGNLA CCCCCCCEEEEEEECCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH YGEIIRNVGIWDAESNMYLGQIFVNGKFKTGAVSHKILGGIDLGNKDYMADWGQSHDLDT HHHHHHHCCCEECCCCEEEEEEEEECCCCCCCCCHHEEECEECCCCCCHHCCCCCCCCCC VDNPFNVYNPNYGTPSNGFPAFDHETPLSQRAGGIMSSEYAAGYIQDELGFFENRLRLTL CCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHCCEEEEE AARYTWLSQSSWGDTQEDTHITPRAGLSFSIDSNTSVYGLYDQAFIPQSGITQNGDPIKP EEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCC LTGNNLEFGIKRDWFDGSWNTTLSAYRITKKNELTSDPKNGPNDIYKVILGEKRAEGIEF CCCCCEEECEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCEE DVRGKIIDGLNVIANYAFTESIVTSSNVPTIAAGSTVPGYAKHTANAWLNYTIQSGKLKG EECCEEECCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHCCCCEEEEEEECCCEEE FGASIGGTGLVGRQTDTWSVGLERLPNYFKLDGGLSYETGKIKVTANVFNILDKYLYSGS ECCCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCEEECCEEEEEHHHHHHHHHHHHCCC YYEWLQAYYWQTEAPRNFRVGVTYKLF HHHHHHHHHCCCCCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3079747; 8202364; 9278503; 2823072; 7515827; 8617231; 9856937; 9865695; 10850805 [H]