| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301041
Identifier: 146301041
GI number: 146301041
Start: 3940410
End: 3941900
Strand: Direct
Name: 146301041
Synonym: Fjoh_3297
Alternate gene names: NA
Gene position: 3940410-3941900 (Clockwise)
Preceding gene: 146301040
Following gene: 146301042
Centisome position: 64.63
GC content: 35.41
Gene sequence:
>1491_bases ATGATAAAATACAGCCCACAAAATTACTTTAAATGCCTGTTTTTTTTATTTCTTTTGATTTCATTTTCAGGACATTCTCA AATCGGAATTGGAACTGTAACACCTAATGCAAGTTCTGTTCTAGACATTACATCGACTACTCAGGGAATGCTTACACCCC GAATGACTACTGCTCAAAGAAATGCTGTCGCATCACCTGCAGATGGTTTATTAGTTTATGATACAGATCTAAAAGCTTTT CATTTCTACTCTGGAGCAACATCTACATGGATTAGTATTACTAGTGGCGTTAATCCAAGACTAAATTTTAAGCGTATTAG AAGCACCGACAATCTTGCCGTAGTTTTAGCTGCAGAACTTGCAGCTGGCGGAGGATCAAAATATCTTTTAAACACCAACA CTCTTTATGAAATTAACGGAACAGTTTCTTTTAATTTCCCTATTGATTTAAATAATGCCTATATACAAGGCCTTGACCCA AATGAAGATGTTTTGTTTCGACCTACAGGAAACCTTTTTGAAGGTGCAACAGGCGGCGGTATTAAAAGTGTTACATTACG TGCGGCTACGGGAAGTGTTTTTAACCTGAATGCTTCAGCAACAGAAAATTTGATTTTTAGAGATTCTGTTGTTGCAAATT CTGCAAACGTAGGGACTATATCGGGTTTTGGATTGGTCTTTCTTAGTATTGTTCAGTATACCGGAAATACAAATGGTGTA ACCTATAATAATATTTCACAATTACTGCTTAGTAACACAGGTTGGCTAAACAACAATAATGGAACTTATGAAAAGTTTAC AGGAACTTTTACACTTATTGAAAAACAAGGAGGTTTTAGTCAGGTAGATGGAACTGCTATAGGGTTTGATGTTTCTACAT CAGGACTTACTATAACTGGTGATGCTGTATTAGAATCGGTAGTTTTTACAGGATCAAACACAGCTGGTTATGTTAAGGGA TATACAACAGGATCTTTTACCGGATATAATTTTAATAACAGCTGGAATGTGCGATCTGCCGGAATTCCAACTGAAACTGA TGCAAATGCAGTTGGAGATTTTTCAATGGATTATGCTGTTGGAACTGGTCTTGCAGTGAGTTTTAATTCTTCGAATCCAA GTAATATTGTGAAAATTGGAGCAACCGGAACACCTTCTACAACTTATTCTAATTTATTTAGGTTTTCAACCGATGCGGCA AACAGACTTCGATATGTAGGGAAAAAGAAAAGGATTTTTCAAATTACAGGATCAATTTCTTTTCAGGTACCAGGGTTAGC TACTCATATAATTTATATAGCCAAAAATGGAACAGTTATAAGCCAGTATAAAATTTATGGAAGAGGCCAGGCTTTAAATG ATATTGTCGTTTTACCATTAAATGCTACAACCGAGTTAGTAAACAATGATTACATTGAAGTTTTTGCCCAAAGATTTTCT GGCACAACTGGAGATATTGTAGTTCCTAATATGGCCATTACAATTAAATAA
Upstream 100 bases:
>100_bases ACGAAAAAATATCCCAAAAAGTAATTATTTCAAATTCCCGAAATTAATTTAAATCATCTCTAAAGACTATAACGACTCAA ATAAACTAATACCAAAAATT
Downstream 100 bases:
>100_bases TTCATCTTCTTTTACAAAATAAAAAACACTTCAAAAAGCATTAAGTTTTTTGAAGTGTTTTTTTATTTTCGATTAATGCA TTTCATGCATTACTTGATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 496; Mature: 496
Protein sequence:
>496_residues MIKYSPQNYFKCLFFLFLLISFSGHSQIGIGTVTPNASSVLDITSTTQGMLTPRMTTAQRNAVASPADGLLVYDTDLKAF HFYSGATSTWISITSGVNPRLNFKRIRSTDNLAVVLAAELAAGGGSKYLLNTNTLYEINGTVSFNFPIDLNNAYIQGLDP NEDVLFRPTGNLFEGATGGGIKSVTLRAATGSVFNLNASATENLIFRDSVVANSANVGTISGFGLVFLSIVQYTGNTNGV TYNNISQLLLSNTGWLNNNNGTYEKFTGTFTLIEKQGGFSQVDGTAIGFDVSTSGLTITGDAVLESVVFTGSNTAGYVKG YTTGSFTGYNFNNSWNVRSAGIPTETDANAVGDFSMDYAVGTGLAVSFNSSNPSNIVKIGATGTPSTTYSNLFRFSTDAA NRLRYVGKKKRIFQITGSISFQVPGLATHIIYIAKNGTVISQYKIYGRGQALNDIVVLPLNATTELVNNDYIEVFAQRFS GTTGDIVVPNMAITIK
Sequences:
>Translated_496_residues MIKYSPQNYFKCLFFLFLLISFSGHSQIGIGTVTPNASSVLDITSTTQGMLTPRMTTAQRNAVASPADGLLVYDTDLKAF HFYSGATSTWISITSGVNPRLNFKRIRSTDNLAVVLAAELAAGGGSKYLLNTNTLYEINGTVSFNFPIDLNNAYIQGLDP NEDVLFRPTGNLFEGATGGGIKSVTLRAATGSVFNLNASATENLIFRDSVVANSANVGTISGFGLVFLSIVQYTGNTNGV TYNNISQLLLSNTGWLNNNNGTYEKFTGTFTLIEKQGGFSQVDGTAIGFDVSTSGLTITGDAVLESVVFTGSNTAGYVKG YTTGSFTGYNFNNSWNVRSAGIPTETDANAVGDFSMDYAVGTGLAVSFNSSNPSNIVKIGATGTPSTTYSNLFRFSTDAA NRLRYVGKKKRIFQITGSISFQVPGLATHIIYIAKNGTVISQYKIYGRGQALNDIVVLPLNATTELVNNDYIEVFAQRFS GTTGDIVVPNMAITIK >Mature_496_residues MIKYSPQNYFKCLFFLFLLISFSGHSQIGIGTVTPNASSVLDITSTTQGMLTPRMTTAQRNAVASPADGLLVYDTDLKAF HFYSGATSTWISITSGVNPRLNFKRIRSTDNLAVVLAAELAAGGGSKYLLNTNTLYEINGTVSFNFPIDLNNAYIQGLDP NEDVLFRPTGNLFEGATGGGIKSVTLRAATGSVFNLNASATENLIFRDSVVANSANVGTISGFGLVFLSIVQYTGNTNGV TYNNISQLLLSNTGWLNNNNGTYEKFTGTFTLIEKQGGFSQVDGTAIGFDVSTSGLTITGDAVLESVVFTGSNTAGYVKG YTTGSFTGYNFNNSWNVRSAGIPTETDANAVGDFSMDYAVGTGLAVSFNSSNPSNIVKIGATGTPSTTYSNLFRFSTDAA NRLRYVGKKKRIFQITGSISFQVPGLATHIIYIAKNGTVISQYKIYGRGQALNDIVVLPLNATTELVNNDYIEVFAQRFS GTTGDIVVPNMAITIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52949; Mature: 52949
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKYSPQNYFKCLFFLFLLISFSGHSQIGIGTVTPNASSVLDITSTTQGMLTPRMTTAQR CCEECHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCHHHC NAVASPADGLLVYDTDLKAFHFYSGATSTWISITSGVNPRLNFKRIRSTDNLAVVLAAEL CCCCCCCCCEEEEECCCCEEEEECCCCEEEEEEECCCCCCCCEEEECCCCCEEEEEEEEH AAGGGSKYLLNTNTLYEINGTVSFNFPIDLNNAYIQGLDPNEDVLFRPTGNLFEGATGGG HCCCCCEEEEECCEEEEEECEEEEEEEEECCCCEEECCCCCCCEEECCCCCCCCCCCCCC IKSVTLRAATGSVFNLNASATENLIFRDSVVANSANVGTISGFGLVFLSIVQYTGNTNGV EEEEEEEEECCCEEEECCCCCCCEEEECEEEECCCCCCEECHHHHHHHHHHHHCCCCCCE TYNNISQLLLSNTGWLNNNNGTYEKFTGTFTLIEKQGGFSQVDGTAIGFDVSTSGLTITG EHHHHHHHHHCCCCEEECCCCCEEEEEEEEEEEEECCCCCCCCCEEEEEEEECCCEEEEH DAVLESVVFTGSNTAGYVKGYTTGSFTGYNFNNSWNVRSAGIPTETDANAVGDFSMDYAV HHHEEEEEEECCCCCEEEEEEECCCEEECCCCCCCCEEECCCCCCCCCCCCCCCEECEEE GTGLAVSFNSSNPSNIVKIGATGTPSTTYSNLFRFSTDAANRLRYVGKKKRIFQITGSIS CCCEEEEECCCCCCCEEEEECCCCCCCCHHHHEEEECCHHHHHHHCCCCCEEEEEECEEE FQVPGLATHIIYIAKNGTVISQYKIYGRGQALNDIVVLPLNATTELVNNDYIEVFAQRFS EECCCCEEEEEEEEECCEEEEEEEEEECCCCCCCEEEEECCCHHHHHCCHHHHHHHHHHC GTTGDIVVPNMAITIK CCCCCEEECCEEEEEC >Mature Secondary Structure MIKYSPQNYFKCLFFLFLLISFSGHSQIGIGTVTPNASSVLDITSTTQGMLTPRMTTAQR CCEECHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCHHHC NAVASPADGLLVYDTDLKAFHFYSGATSTWISITSGVNPRLNFKRIRSTDNLAVVLAAEL CCCCCCCCCEEEEECCCCEEEEECCCCEEEEEEECCCCCCCCEEEECCCCCEEEEEEEEH AAGGGSKYLLNTNTLYEINGTVSFNFPIDLNNAYIQGLDPNEDVLFRPTGNLFEGATGGG HCCCCCEEEEECCEEEEEECEEEEEEEEECCCCEEECCCCCCCEEECCCCCCCCCCCCCC IKSVTLRAATGSVFNLNASATENLIFRDSVVANSANVGTISGFGLVFLSIVQYTGNTNGV EEEEEEEEECCCEEEECCCCCCCEEEECEEEECCCCCCEECHHHHHHHHHHHHCCCCCCE TYNNISQLLLSNTGWLNNNNGTYEKFTGTFTLIEKQGGFSQVDGTAIGFDVSTSGLTITG EHHHHHHHHHCCCCEEECCCCCEEEEEEEEEEEEECCCCCCCCCEEEEEEEECCCEEEEH DAVLESVVFTGSNTAGYVKGYTTGSFTGYNFNNSWNVRSAGIPTETDANAVGDFSMDYAV HHHEEEEEEECCCCCEEEEEEECCCEEECCCCCCCCEEECCCCCCCCCCCCCCCEECEEE GTGLAVSFNSSNPSNIVKIGATGTPSTTYSNLFRFSTDAANRLRYVGKKKRIFQITGSIS CCCEEEEECCCCCCCEEEEECCCCCCCCHHHHEEEECCHHHHHHHCCCCCEEEEEECEEE FQVPGLATHIIYIAKNGTVISQYKIYGRGQALNDIVVLPLNATTELVNNDYIEVFAQRFS EECCCCEEEEEEEEECCEEEEEEEEEECCCCCCCEEEEECCCHHHHHCCHHHHHHHHHHC GTTGDIVVPNMAITIK CCCCCEEECCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA