| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301040
Identifier: 146301040
GI number: 146301040
Start: 3938557
End: 3940356
Strand: Direct
Name: 146301040
Synonym: Fjoh_3296
Alternate gene names: NA
Gene position: 3938557-3940356 (Clockwise)
Preceding gene: 146301039
Following gene: 146301041
Centisome position: 64.6
GC content: 36.44
Gene sequence:
>1800_bases ATGAAAAAAATTACTACCTTATTTCTTTTGGTTTCGATTAATGTTTTTTCTCAAATATATGTAGGAGCCACTACACCTCT TTATGTAAAAAATCAAGTATTGTTTGTTAATCAAGGTATAAACTTAGCTGCAAACTCTAATGTATATTTACGGAATAATT CGCAGCTGCTTCAAGGTACGAGCGGTACTTCAACAAATTCAGGAACAGGAACAATTTCAGTTTATCAGGAAGGAACATCT GATAATTTCGAGTACAATTATTGGTGTTCTCCAGTCGGTACGCCATCTGCAGGAGCAGGAAATACTAATTTTGGAATTGC CCTGCTTAACCGACCTTCGACTGTAACTGCTTCTACTCCTGCCACAATTCTTCCTCTCTCAAGCCTTGATGGAACAGCAA ATCCGTTAGCCATAGCTTCCCGCTGGATTTATAAATTAGCCAACGCAGACAGTTATTGGCAGTGGGTTCAAGTAGGAAGT GCTTCTACTATTGCGCCAGGCGAAGGGTTTACGATGAAAGGAACAAGCGGCACAGATACGGCAGATCCGGAAGGAACAAG TATCGTAAATAATCCCGGCAGTTCGCAGCGATATGATTTTAGGGGAAAACCAAATGATGGTAATATTTCTGTTTCTGTTG GAGCTGCAGGAGCCTCCACTCTTACAGGTAATCCTTATCCTTCTGCTCTGCATCTTAATGCATTTTTGTTAGATCCGTCA AATAGTGCATGTACCAGAATTGCCTATTTTTGGGAACAGGATAAAACCACAAATTCTCATTATTTAGCTGCTTATCGTGC TGGTTATGGCGCTTATGCCCCTATGAGTGTAAATACAAATGGTGTATATACCGCTGCTACTTTCAATAGTTATAATGGAG ATGGTACAGTAAATACAGTGGGATCTCCATCGGGAATTGTAATCGAACGCAGATATTCGCCTATAGGTCAAGGTTTCATT ATTTATGGAAACACGAGCGGAACAGTTACTTTTAGAAACTCTCACCGCATTTTTGTAAAAGAAGCTGCAGGTTCCTCACA ATTTGAAAAACCTTCTAAAGTAAAAACACTTAATGAAAATAAAAAAACCGATGAGGAAGATGAAATTACAGATGTTCCGC ACTTCAAAATAAATACCATAATAAACAATCAGTTTACAAGACAAATTGCCCTTGCATTTCTTCCAGAAGCAACAGATAAT ATCGATGCAGGAATGGATGCTCTTAGTATGGATGATGATTTACCCAACGATGTTTTGTTTTGGCTTGAAGATGCCGGGTA TGTAATTCAAGGTGTTAATTTTGATGTATCAAAAAAAATTCCGCTTCATGTAAAGGCAACGGCCAGCAGTACTTTCAAAT TTTCTGTGCCTATAATTACAAATTTTGATCCTTCCCAAAATATTTATTTGTATGATGCTTTGGATTCTTCCTATCATGAT ATAAAAAACAGTTCTTATGAAGTCACTCTTGCATCTGGGGTTTATAATGACCGATTTAAGATTGCTTTTAAAAATGAAAC ACTCGGCATTGATGACAATAATAAATCCAGCTTTTTTATAGCTCAGGATAATTACAATCAGCTTTTAAAAGCTTCTAATC CAGACACGAGAAATTTTAAATCTTTCAGTCTTTATGATATATCTGGCAAAAAAGTTTTATTCAAAAACAATTTAGGAACA GAACAAAACTATAGTTTCTCTACATCTGGCTTAAGCCATGGAGTTTACATTGCTGTATTTCTAACAGACGATAACGAAAA AATATCCCAAAAAGTAATTATTTCAAATTCCCGAAATTAA
Upstream 100 bases:
>100_bases TTAAAAAGCATTTTTCTGAGGCTTTTTTTTGAGTGATTTGTATTTATTCAAATCAAAGATTTTTATTACACCTACTCTCT AATTTTTAATAAAAAAATTA
Downstream 100 bases:
>100_bases TTTAAATCATCTCTAAAGACTATAACGACTCAAATAAACTAATACCAAAAATTATGATAAAATACAGCCCACAAAATTAC TTTAAATGCCTGTTTTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 599; Mature: 599
Protein sequence:
>599_residues MKKITTLFLLVSINVFSQIYVGATTPLYVKNQVLFVNQGINLAANSNVYLRNNSQLLQGTSGTSTNSGTGTISVYQEGTS DNFEYNYWCSPVGTPSAGAGNTNFGIALLNRPSTVTASTPATILPLSSLDGTANPLAIASRWIYKLANADSYWQWVQVGS ASTIAPGEGFTMKGTSGTDTADPEGTSIVNNPGSSQRYDFRGKPNDGNISVSVGAAGASTLTGNPYPSALHLNAFLLDPS NSACTRIAYFWEQDKTTNSHYLAAYRAGYGAYAPMSVNTNGVYTAATFNSYNGDGTVNTVGSPSGIVIERRYSPIGQGFI IYGNTSGTVTFRNSHRIFVKEAAGSSQFEKPSKVKTLNENKKTDEEDEITDVPHFKINTIINNQFTRQIALAFLPEATDN IDAGMDALSMDDDLPNDVLFWLEDAGYVIQGVNFDVSKKIPLHVKATASSTFKFSVPIITNFDPSQNIYLYDALDSSYHD IKNSSYEVTLASGVYNDRFKIAFKNETLGIDDNNKSSFFIAQDNYNQLLKASNPDTRNFKSFSLYDISGKKVLFKNNLGT EQNYSFSTSGLSHGVYIAVFLTDDNEKISQKVIISNSRN
Sequences:
>Translated_599_residues MKKITTLFLLVSINVFSQIYVGATTPLYVKNQVLFVNQGINLAANSNVYLRNNSQLLQGTSGTSTNSGTGTISVYQEGTS DNFEYNYWCSPVGTPSAGAGNTNFGIALLNRPSTVTASTPATILPLSSLDGTANPLAIASRWIYKLANADSYWQWVQVGS ASTIAPGEGFTMKGTSGTDTADPEGTSIVNNPGSSQRYDFRGKPNDGNISVSVGAAGASTLTGNPYPSALHLNAFLLDPS NSACTRIAYFWEQDKTTNSHYLAAYRAGYGAYAPMSVNTNGVYTAATFNSYNGDGTVNTVGSPSGIVIERRYSPIGQGFI IYGNTSGTVTFRNSHRIFVKEAAGSSQFEKPSKVKTLNENKKTDEEDEITDVPHFKINTIINNQFTRQIALAFLPEATDN IDAGMDALSMDDDLPNDVLFWLEDAGYVIQGVNFDVSKKIPLHVKATASSTFKFSVPIITNFDPSQNIYLYDALDSSYHD IKNSSYEVTLASGVYNDRFKIAFKNETLGIDDNNKSSFFIAQDNYNQLLKASNPDTRNFKSFSLYDISGKKVLFKNNLGT EQNYSFSTSGLSHGVYIAVFLTDDNEKISQKVIISNSRN >Mature_599_residues MKKITTLFLLVSINVFSQIYVGATTPLYVKNQVLFVNQGINLAANSNVYLRNNSQLLQGTSGTSTNSGTGTISVYQEGTS DNFEYNYWCSPVGTPSAGAGNTNFGIALLNRPSTVTASTPATILPLSSLDGTANPLAIASRWIYKLANADSYWQWVQVGS ASTIAPGEGFTMKGTSGTDTADPEGTSIVNNPGSSQRYDFRGKPNDGNISVSVGAAGASTLTGNPYPSALHLNAFLLDPS NSACTRIAYFWEQDKTTNSHYLAAYRAGYGAYAPMSVNTNGVYTAATFNSYNGDGTVNTVGSPSGIVIERRYSPIGQGFI IYGNTSGTVTFRNSHRIFVKEAAGSSQFEKPSKVKTLNENKKTDEEDEITDVPHFKINTIINNQFTRQIALAFLPEATDN IDAGMDALSMDDDLPNDVLFWLEDAGYVIQGVNFDVSKKIPLHVKATASSTFKFSVPIITNFDPSQNIYLYDALDSSYHD IKNSSYEVTLASGVYNDRFKIAFKNETLGIDDNNKSSFFIAQDNYNQLLKASNPDTRNFKSFSLYDISGKKVLFKNNLGT EQNYSFSTSGLSHGVYIAVFLTDDNEKISQKVIISNSRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65118; Mature: 65118
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKITTLFLLVSINVFSQIYVGATTPLYVKNQVLFVNQGINLAANSNVYLRNNSQLLQGT CCCCEEEEEEEEHHHHHEEEECCCCCEEEECEEEEEECCCEEEECCEEEEECCCEEEECC SGTSTNSGTGTISVYQEGTSDNFEYNYWCSPVGTPSAGAGNTNFGIALLNRPSTVTASTP CCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCEEECCCC ATILPLSSLDGTANPLAIASRWIYKLANADSYWQWVQVGSASTIAPGEGFTMKGTSGTDT EEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCEECCCCCEEEECCCCCCC ADPEGTSIVNNPGSSQRYDFRGKPNDGNISVSVGAAGASTLTGNPYPSALHLNAFLLDPS CCCCCCEEECCCCCCCEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEECCC NSACTRIAYFWEQDKTTNSHYLAAYRAGYGAYAPMSVNTNGVYTAATFNSYNGDGTVNTV CCCEEEEEEEEECCCCCCCEEEEEEECCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEC GSPSGIVIERRYSPIGQGFIIYGNTSGTVTFRNSHRIFVKEAAGSSQFEKPSKVKTLNEN CCCCCEEEEEECCCCCCEEEEEECCCCEEEEECCCEEEEEECCCCCCCCCCCHHEECCCC KKTDEEDEITDVPHFKINTIINNQFTRQIALAFLPEATDNIDAGMDALSMDDDLPNDVLF CCCCCCCCCCCCCCEEEEEEECCCHHHEEEEEECCCCCCCCCCCCCEECCCCCCCCCEEE WLEDAGYVIQGVNFDVSKKIPLHVKATASSTFKFSVPIITNFDPSQNIYLYDALDSSYHD EEECCCEEEEECCCCCCCCCCEEEEECCCCEEEEEEEEEECCCCCCCEEEEECCCCCHHH IKNSSYEVTLASGVYNDRFKIAFKNETLGIDDNNKSSFFIAQDNYNQLLKASNPDTRNFK HCCCCEEEEEECCCCCCEEEEEECCCEECCCCCCCCEEEEEECCHHHHHCCCCCCCCCCC SFSLYDISGKKVLFKNNLGTEQNYSFSTSGLSHGVYIAVFLTDDNEKISQKVIISNSRN EEEEEECCCCEEEEECCCCCCCCCEEECCCCCCCEEEEEEEECCCCCCCEEEEEECCCC >Mature Secondary Structure MKKITTLFLLVSINVFSQIYVGATTPLYVKNQVLFVNQGINLAANSNVYLRNNSQLLQGT CCCCEEEEEEEEHHHHHEEEECCCCCEEEECEEEEEECCCEEEECCEEEEECCCEEEECC SGTSTNSGTGTISVYQEGTSDNFEYNYWCSPVGTPSAGAGNTNFGIALLNRPSTVTASTP CCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCEEECCCC ATILPLSSLDGTANPLAIASRWIYKLANADSYWQWVQVGSASTIAPGEGFTMKGTSGTDT EEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCEECCCCCEEEECCCCCCC ADPEGTSIVNNPGSSQRYDFRGKPNDGNISVSVGAAGASTLTGNPYPSALHLNAFLLDPS CCCCCCEEECCCCCCCEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEECCC NSACTRIAYFWEQDKTTNSHYLAAYRAGYGAYAPMSVNTNGVYTAATFNSYNGDGTVNTV CCCEEEEEEEEECCCCCCCEEEEEEECCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEC GSPSGIVIERRYSPIGQGFIIYGNTSGTVTFRNSHRIFVKEAAGSSQFEKPSKVKTLNEN CCCCCEEEEEECCCCCCEEEEEECCCCEEEEECCCEEEEEECCCCCCCCCCCHHEECCCC KKTDEEDEITDVPHFKINTIINNQFTRQIALAFLPEATDNIDAGMDALSMDDDLPNDVLF CCCCCCCCCCCCCCEEEEEEECCCHHHEEEEEECCCCCCCCCCCCCEECCCCCCCCCEEE WLEDAGYVIQGVNFDVSKKIPLHVKATASSTFKFSVPIITNFDPSQNIYLYDALDSSYHD EEECCCEEEEECCCCCCCCCCEEEEECCCCEEEEEEEEEECCCCCCCEEEEECCCCCHHH IKNSSYEVTLASGVYNDRFKIAFKNETLGIDDNNKSSFFIAQDNYNQLLKASNPDTRNFK HCCCCEEEEEECCCCCCEEEEEECCCEECCCCCCCCEEEEEECCHHHHHCCCCCCCCCCC SFSLYDISGKKVLFKNNLGTEQNYSFSTSGLSHGVYIAVFLTDDNEKISQKVIISNSRN EEEEEECCCCEEEEECCCCCCCCCEEECCCCCCCEEEEEEEECCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA