Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301040

Identifier: 146301040

GI number: 146301040

Start: 3938557

End: 3940356

Strand: Direct

Name: 146301040

Synonym: Fjoh_3296

Alternate gene names: NA

Gene position: 3938557-3940356 (Clockwise)

Preceding gene: 146301039

Following gene: 146301041

Centisome position: 64.6

GC content: 36.44

Gene sequence:

>1800_bases
ATGAAAAAAATTACTACCTTATTTCTTTTGGTTTCGATTAATGTTTTTTCTCAAATATATGTAGGAGCCACTACACCTCT
TTATGTAAAAAATCAAGTATTGTTTGTTAATCAAGGTATAAACTTAGCTGCAAACTCTAATGTATATTTACGGAATAATT
CGCAGCTGCTTCAAGGTACGAGCGGTACTTCAACAAATTCAGGAACAGGAACAATTTCAGTTTATCAGGAAGGAACATCT
GATAATTTCGAGTACAATTATTGGTGTTCTCCAGTCGGTACGCCATCTGCAGGAGCAGGAAATACTAATTTTGGAATTGC
CCTGCTTAACCGACCTTCGACTGTAACTGCTTCTACTCCTGCCACAATTCTTCCTCTCTCAAGCCTTGATGGAACAGCAA
ATCCGTTAGCCATAGCTTCCCGCTGGATTTATAAATTAGCCAACGCAGACAGTTATTGGCAGTGGGTTCAAGTAGGAAGT
GCTTCTACTATTGCGCCAGGCGAAGGGTTTACGATGAAAGGAACAAGCGGCACAGATACGGCAGATCCGGAAGGAACAAG
TATCGTAAATAATCCCGGCAGTTCGCAGCGATATGATTTTAGGGGAAAACCAAATGATGGTAATATTTCTGTTTCTGTTG
GAGCTGCAGGAGCCTCCACTCTTACAGGTAATCCTTATCCTTCTGCTCTGCATCTTAATGCATTTTTGTTAGATCCGTCA
AATAGTGCATGTACCAGAATTGCCTATTTTTGGGAACAGGATAAAACCACAAATTCTCATTATTTAGCTGCTTATCGTGC
TGGTTATGGCGCTTATGCCCCTATGAGTGTAAATACAAATGGTGTATATACCGCTGCTACTTTCAATAGTTATAATGGAG
ATGGTACAGTAAATACAGTGGGATCTCCATCGGGAATTGTAATCGAACGCAGATATTCGCCTATAGGTCAAGGTTTCATT
ATTTATGGAAACACGAGCGGAACAGTTACTTTTAGAAACTCTCACCGCATTTTTGTAAAAGAAGCTGCAGGTTCCTCACA
ATTTGAAAAACCTTCTAAAGTAAAAACACTTAATGAAAATAAAAAAACCGATGAGGAAGATGAAATTACAGATGTTCCGC
ACTTCAAAATAAATACCATAATAAACAATCAGTTTACAAGACAAATTGCCCTTGCATTTCTTCCAGAAGCAACAGATAAT
ATCGATGCAGGAATGGATGCTCTTAGTATGGATGATGATTTACCCAACGATGTTTTGTTTTGGCTTGAAGATGCCGGGTA
TGTAATTCAAGGTGTTAATTTTGATGTATCAAAAAAAATTCCGCTTCATGTAAAGGCAACGGCCAGCAGTACTTTCAAAT
TTTCTGTGCCTATAATTACAAATTTTGATCCTTCCCAAAATATTTATTTGTATGATGCTTTGGATTCTTCCTATCATGAT
ATAAAAAACAGTTCTTATGAAGTCACTCTTGCATCTGGGGTTTATAATGACCGATTTAAGATTGCTTTTAAAAATGAAAC
ACTCGGCATTGATGACAATAATAAATCCAGCTTTTTTATAGCTCAGGATAATTACAATCAGCTTTTAAAAGCTTCTAATC
CAGACACGAGAAATTTTAAATCTTTCAGTCTTTATGATATATCTGGCAAAAAAGTTTTATTCAAAAACAATTTAGGAACA
GAACAAAACTATAGTTTCTCTACATCTGGCTTAAGCCATGGAGTTTACATTGCTGTATTTCTAACAGACGATAACGAAAA
AATATCCCAAAAAGTAATTATTTCAAATTCCCGAAATTAA

Upstream 100 bases:

>100_bases
TTAAAAAGCATTTTTCTGAGGCTTTTTTTTGAGTGATTTGTATTTATTCAAATCAAAGATTTTTATTACACCTACTCTCT
AATTTTTAATAAAAAAATTA

Downstream 100 bases:

>100_bases
TTTAAATCATCTCTAAAGACTATAACGACTCAAATAAACTAATACCAAAAATTATGATAAAATACAGCCCACAAAATTAC
TTTAAATGCCTGTTTTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 599; Mature: 599

Protein sequence:

>599_residues
MKKITTLFLLVSINVFSQIYVGATTPLYVKNQVLFVNQGINLAANSNVYLRNNSQLLQGTSGTSTNSGTGTISVYQEGTS
DNFEYNYWCSPVGTPSAGAGNTNFGIALLNRPSTVTASTPATILPLSSLDGTANPLAIASRWIYKLANADSYWQWVQVGS
ASTIAPGEGFTMKGTSGTDTADPEGTSIVNNPGSSQRYDFRGKPNDGNISVSVGAAGASTLTGNPYPSALHLNAFLLDPS
NSACTRIAYFWEQDKTTNSHYLAAYRAGYGAYAPMSVNTNGVYTAATFNSYNGDGTVNTVGSPSGIVIERRYSPIGQGFI
IYGNTSGTVTFRNSHRIFVKEAAGSSQFEKPSKVKTLNENKKTDEEDEITDVPHFKINTIINNQFTRQIALAFLPEATDN
IDAGMDALSMDDDLPNDVLFWLEDAGYVIQGVNFDVSKKIPLHVKATASSTFKFSVPIITNFDPSQNIYLYDALDSSYHD
IKNSSYEVTLASGVYNDRFKIAFKNETLGIDDNNKSSFFIAQDNYNQLLKASNPDTRNFKSFSLYDISGKKVLFKNNLGT
EQNYSFSTSGLSHGVYIAVFLTDDNEKISQKVIISNSRN

Sequences:

>Translated_599_residues
MKKITTLFLLVSINVFSQIYVGATTPLYVKNQVLFVNQGINLAANSNVYLRNNSQLLQGTSGTSTNSGTGTISVYQEGTS
DNFEYNYWCSPVGTPSAGAGNTNFGIALLNRPSTVTASTPATILPLSSLDGTANPLAIASRWIYKLANADSYWQWVQVGS
ASTIAPGEGFTMKGTSGTDTADPEGTSIVNNPGSSQRYDFRGKPNDGNISVSVGAAGASTLTGNPYPSALHLNAFLLDPS
NSACTRIAYFWEQDKTTNSHYLAAYRAGYGAYAPMSVNTNGVYTAATFNSYNGDGTVNTVGSPSGIVIERRYSPIGQGFI
IYGNTSGTVTFRNSHRIFVKEAAGSSQFEKPSKVKTLNENKKTDEEDEITDVPHFKINTIINNQFTRQIALAFLPEATDN
IDAGMDALSMDDDLPNDVLFWLEDAGYVIQGVNFDVSKKIPLHVKATASSTFKFSVPIITNFDPSQNIYLYDALDSSYHD
IKNSSYEVTLASGVYNDRFKIAFKNETLGIDDNNKSSFFIAQDNYNQLLKASNPDTRNFKSFSLYDISGKKVLFKNNLGT
EQNYSFSTSGLSHGVYIAVFLTDDNEKISQKVIISNSRN
>Mature_599_residues
MKKITTLFLLVSINVFSQIYVGATTPLYVKNQVLFVNQGINLAANSNVYLRNNSQLLQGTSGTSTNSGTGTISVYQEGTS
DNFEYNYWCSPVGTPSAGAGNTNFGIALLNRPSTVTASTPATILPLSSLDGTANPLAIASRWIYKLANADSYWQWVQVGS
ASTIAPGEGFTMKGTSGTDTADPEGTSIVNNPGSSQRYDFRGKPNDGNISVSVGAAGASTLTGNPYPSALHLNAFLLDPS
NSACTRIAYFWEQDKTTNSHYLAAYRAGYGAYAPMSVNTNGVYTAATFNSYNGDGTVNTVGSPSGIVIERRYSPIGQGFI
IYGNTSGTVTFRNSHRIFVKEAAGSSQFEKPSKVKTLNENKKTDEEDEITDVPHFKINTIINNQFTRQIALAFLPEATDN
IDAGMDALSMDDDLPNDVLFWLEDAGYVIQGVNFDVSKKIPLHVKATASSTFKFSVPIITNFDPSQNIYLYDALDSSYHD
IKNSSYEVTLASGVYNDRFKIAFKNETLGIDDNNKSSFFIAQDNYNQLLKASNPDTRNFKSFSLYDISGKKVLFKNNLGT
EQNYSFSTSGLSHGVYIAVFLTDDNEKISQKVIISNSRN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65118; Mature: 65118

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKITTLFLLVSINVFSQIYVGATTPLYVKNQVLFVNQGINLAANSNVYLRNNSQLLQGT
CCCCEEEEEEEEHHHHHEEEECCCCCEEEECEEEEEECCCEEEECCEEEEECCCEEEECC
SGTSTNSGTGTISVYQEGTSDNFEYNYWCSPVGTPSAGAGNTNFGIALLNRPSTVTASTP
CCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCEEECCCC
ATILPLSSLDGTANPLAIASRWIYKLANADSYWQWVQVGSASTIAPGEGFTMKGTSGTDT
EEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCEECCCCCEEEECCCCCCC
ADPEGTSIVNNPGSSQRYDFRGKPNDGNISVSVGAAGASTLTGNPYPSALHLNAFLLDPS
CCCCCCEEECCCCCCCEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEECCC
NSACTRIAYFWEQDKTTNSHYLAAYRAGYGAYAPMSVNTNGVYTAATFNSYNGDGTVNTV
CCCEEEEEEEEECCCCCCCEEEEEEECCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEC
GSPSGIVIERRYSPIGQGFIIYGNTSGTVTFRNSHRIFVKEAAGSSQFEKPSKVKTLNEN
CCCCCEEEEEECCCCCCEEEEEECCCCEEEEECCCEEEEEECCCCCCCCCCCHHEECCCC
KKTDEEDEITDVPHFKINTIINNQFTRQIALAFLPEATDNIDAGMDALSMDDDLPNDVLF
CCCCCCCCCCCCCCEEEEEEECCCHHHEEEEEECCCCCCCCCCCCCEECCCCCCCCCEEE
WLEDAGYVIQGVNFDVSKKIPLHVKATASSTFKFSVPIITNFDPSQNIYLYDALDSSYHD
EEECCCEEEEECCCCCCCCCCEEEEECCCCEEEEEEEEEECCCCCCCEEEEECCCCCHHH
IKNSSYEVTLASGVYNDRFKIAFKNETLGIDDNNKSSFFIAQDNYNQLLKASNPDTRNFK
HCCCCEEEEEECCCCCCEEEEEECCCEECCCCCCCCEEEEEECCHHHHHCCCCCCCCCCC
SFSLYDISGKKVLFKNNLGTEQNYSFSTSGLSHGVYIAVFLTDDNEKISQKVIISNSRN
EEEEEECCCCEEEEECCCCCCCCCEEECCCCCCCEEEEEEEECCCCCCCEEEEEECCCC
>Mature Secondary Structure
MKKITTLFLLVSINVFSQIYVGATTPLYVKNQVLFVNQGINLAANSNVYLRNNSQLLQGT
CCCCEEEEEEEEHHHHHEEEECCCCCEEEECEEEEEECCCEEEECCEEEEECCCEEEECC
SGTSTNSGTGTISVYQEGTSDNFEYNYWCSPVGTPSAGAGNTNFGIALLNRPSTVTASTP
CCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCEEECCCC
ATILPLSSLDGTANPLAIASRWIYKLANADSYWQWVQVGSASTIAPGEGFTMKGTSGTDT
EEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCEECCCCCEEEECCCCCCC
ADPEGTSIVNNPGSSQRYDFRGKPNDGNISVSVGAAGASTLTGNPYPSALHLNAFLLDPS
CCCCCCEEECCCCCCCEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEECCC
NSACTRIAYFWEQDKTTNSHYLAAYRAGYGAYAPMSVNTNGVYTAATFNSYNGDGTVNTV
CCCEEEEEEEEECCCCCCCEEEEEEECCCCCCCEEEECCCCEEEEEEECCCCCCCEEEEC
GSPSGIVIERRYSPIGQGFIIYGNTSGTVTFRNSHRIFVKEAAGSSQFEKPSKVKTLNEN
CCCCCEEEEEECCCCCCEEEEEECCCCEEEEECCCEEEEEECCCCCCCCCCCHHEECCCC
KKTDEEDEITDVPHFKINTIINNQFTRQIALAFLPEATDNIDAGMDALSMDDDLPNDVLF
CCCCCCCCCCCCCCEEEEEEECCCHHHEEEEEECCCCCCCCCCCCCEECCCCCCCCCEEE
WLEDAGYVIQGVNFDVSKKIPLHVKATASSTFKFSVPIITNFDPSQNIYLYDALDSSYHD
EEECCCEEEEECCCCCCCCCCEEEEECCCCEEEEEEEEEECCCCCCCEEEEECCCCCHHH
IKNSSYEVTLASGVYNDRFKIAFKNETLGIDDNNKSSFFIAQDNYNQLLKASNPDTRNFK
HCCCCEEEEEECCCCCCEEEEEECCCEECCCCCCCCEEEEEECCHHHHHCCCCCCCCCCC
SFSLYDISGKKVLFKNNLGTEQNYSFSTSGLSHGVYIAVFLTDDNEKISQKVIISNSRN
EEEEEECCCCEEEEECCCCCCCCCEEECCCCCCCEEEEEEEECCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA