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The map label for this gene is nlpC [H]

Identifier: 146301023

GI number: 146301023

Start: 3918593

End: 3919216

Strand: Reverse

Name: nlpC [H]

Synonym: Fjoh_3279

Alternate gene names: 146301023

Gene position: 3919216-3918593 (Counterclockwise)

Preceding gene: 146301026

Following gene: 146301022

Centisome position: 64.28

GC content: 33.49

Gene sequence:

>624_bases
ATGATTCTTATGATGCATTTATTTACAGAATGCTATGCTCAAAAATATATTTCGCAGATTCCGTTTAAATATGATTATTC
TTTAGAGCTGTTAAAGAAACAGTCTCAAATGAAAGAAACAGGTTTAAAAAACAAAACCGTTGTTAATGACAATTCAGAGA
ATTTGAGTGACGAAGTTCTCGCTCTAAAAGAAAAATACTCTATTATTCTGGCTGTAATGCCAAATAAAATTACCAACTAC
AAATTATACTCTTACATAGATCCTTGGCTGAATACGCCATATAAGGAGAAAAGCTTTTCTAAAAAAGGAATTGACTGTTC
TTATTTTCTTCAGTCTCTGTACAGTGATGTTTATAAAGTTACGCTTCCTAAAGACCCGGCTGGAATGTGGAAATCAAAAT
CTATTCAAATTTTTACCGGTCGCAGTTTCCTTGCAGAAGGCGATCTGGTTTTCTTTAGATACGACAAAGATCATCCCATA
TCAGATGTTGGTTTGTACCTGCATAATGACCGAATTCTGGCTTGTACAGACAAAGGTCTGGCAATATATAATTTTAATGA
TGAATATTTTCAGTTACGATACATAGGCGCAGGACGAATTAACGAAGATGGAAAGAAAAAGTAA

Upstream 100 bases:

>100_bases
TTGCTAAAATTTAAAAAATTACCCATTTGGGTGTGAAATAATATTTTAATTATCTAAAAAAAGAGTACTAAATAATATTT
TTATGAGGCAGATTGTTATA

Downstream 100 bases:

>100_bases
AAAAAGCCTTGAAGATCTTGCGTACGAAATTGAAAATATTTCGTATGATATTAGAGCGGAAGTGATTGCTAATGAGCTTC
TTGAAAACAAAGCTGTGGTT

Product: NLP/P60 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MILMMHLFTECYAQKYISQIPFKYDYSLELLKKQSQMKETGLKNKTVVNDNSENLSDEVLALKEKYSIILAVMPNKITNY
KLYSYIDPWLNTPYKEKSFSKKGIDCSYFLQSLYSDVYKVTLPKDPAGMWKSKSIQIFTGRSFLAEGDLVFFRYDKDHPI
SDVGLYLHNDRILACTDKGLAIYNFNDEYFQLRYIGAGRINEDGKKK

Sequences:

>Translated_207_residues
MILMMHLFTECYAQKYISQIPFKYDYSLELLKKQSQMKETGLKNKTVVNDNSENLSDEVLALKEKYSIILAVMPNKITNY
KLYSYIDPWLNTPYKEKSFSKKGIDCSYFLQSLYSDVYKVTLPKDPAGMWKSKSIQIFTGRSFLAEGDLVFFRYDKDHPI
SDVGLYLHNDRILACTDKGLAIYNFNDEYFQLRYIGAGRINEDGKKK
>Mature_207_residues
MILMMHLFTECYAQKYISQIPFKYDYSLELLKKQSQMKETGLKNKTVVNDNSENLSDEVLALKEKYSIILAVMPNKITNY
KLYSYIDPWLNTPYKEKSFSKKGIDCSYFLQSLYSDVYKVTLPKDPAGMWKSKSIQIFTGRSFLAEGDLVFFRYDKDHPI
SDVGLYLHNDRILACTDKGLAIYNFNDEYFQLRYIGAGRINEDGKKK

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 24172; Mature: 24172

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILMMHLFTECYAQKYISQIPFKYDYSLELLKKQSQMKETGLKNKTVVNDNSENLSDEVL
CEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHH
ALKEKYSIILAVMPNKITNYKLYSYIDPWLNTPYKEKSFSKKGIDCSYFLQSLYSDVYKV
HHHHCCEEEEEECCCCCCCEEEEEEECHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHEEE
TLPKDPAGMWKSKSIQIFTGRSFLAEGDLVFFRYDKDHPISDVGLYLHNDRILACTDKGL
ECCCCCCCCCCCCCEEEEECCCEEECCCEEEEEECCCCCCCCEEEEEECCEEEEEECCCE
AIYNFNDEYFQLRYIGAGRINEDGKKK
EEEECCCCEEEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MILMMHLFTECYAQKYISQIPFKYDYSLELLKKQSQMKETGLKNKTVVNDNSENLSDEVL
CEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHH
ALKEKYSIILAVMPNKITNYKLYSYIDPWLNTPYKEKSFSKKGIDCSYFLQSLYSDVYKV
HHHHCCEEEEEECCCCCCCEEEEEEECHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHEEE
TLPKDPAGMWKSKSIQIFTGRSFLAEGDLVFFRYDKDHPISDVGLYLHNDRILACTDKGL
ECCCCCCCCCCCCCEEEEECCCEEECCCEEEEEECCCCCCCCEEEEEECCEEEEEECCCE
AIYNFNDEYFQLRYIGAGRINEDGKKK
EEEECCCCEEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]