| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301022
Identifier: 146301022
GI number: 146301022
Start: 3917665
End: 3918609
Strand: Reverse
Name: 146301022
Synonym: Fjoh_3278
Alternate gene names: NA
Gene position: 3918609-3917665 (Counterclockwise)
Preceding gene: 146301023
Following gene: 146301021
Centisome position: 64.27
GC content: 33.44
Gene sequence:
>945_bases ATGGAAAGAAAAAGTAAAAAAAGCCTTGAAGATCTTGCGTACGAAATTGAAAATATTTCGTATGATATTAGAGCGGAAGT GATTGCTAATGAGCTTCTTGAAAACAAAGCTGTGGTTCAGGATGAAATTACGATTTCGAATCACGGACAGTTTTCACGTG CCTACAGAAGCGATATTCTGGGAGCGGCAATTCAGGATGATAATTACGACAAACAAGAATATCTAAATATACGCTTATCT CGAGACAGTATGTATGACGCACTTCCGGAAGGTTTTGTGCATAGTCTGACCGAAAATAACTCTGATAAATCTGTAAAACA GATGATAAGGGAGCATAAACACCAGAAAAAGCAAGAGGCTGAAGCACGTGTTTTTTTTACTCCTTTTGAAAACGAAATTT TTCATTATCGGACTAAAATTGAAAGTGTTGAAAGGAATTTTTTGTATAAGCTGAACGGGAGTAAACCGTTAGATTTTTTC TATGATTTTTGGGGTTTATCACACATTTATCCAGAGATTTTAGTTTCAAAATTTATTCAGTTACTGCCGTATGCCTACAA GATAGTTGGAGATATTGATCTTGCCTGTAATTGTTTATCAAGCATTATAGAAGAAAAAGTAACCTATACAACAACAAGTT CTAAAGAATACAGCGAAGAAGCTGAGCAGATAAAGCTGGGTGAAAACAGGTTAGGAGTCGATTTTATTACCGGAAAAGAT TATATGGATTATTCTATGAATTTAAGGATAGAAATAGGTCCTATAATGAACAAACCTTATCAGCATTACCTTAAAAACGG CGATATAAAAATATTTATAGATTGTTTTTGCGAACATTTTTTTCCAATGGAAGTAGAAGTAAAAACAGTGTTATTGATTA ATGAAGAAACAGAAGAGTTTAATTTTAGTAAAGAACCTGTGTTAGGGTATACAACACGAATTTAG
Upstream 100 bases:
>100_bases GACCGAATTCTGGCTTGTACAGACAAAGGTCTGGCAATATATAATTTTAATGATGAATATTTTCAGTTACGATACATAGG CGCAGGACGAATTAACGAAG
Downstream 100 bases:
>100_bases TAATGGTAAAAAAGCATTTATTAGCCCTTATTGATATTAGGCTTATTGTATTTTTAGTAGTAATTATAGCGGTAAGTTTT ATACTTACCATGGTATTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MERKSKKSLEDLAYEIENISYDIRAEVIANELLENKAVVQDEITISNHGQFSRAYRSDILGAAIQDDNYDKQEYLNIRLS RDSMYDALPEGFVHSLTENNSDKSVKQMIREHKHQKKQEAEARVFFTPFENEIFHYRTKIESVERNFLYKLNGSKPLDFF YDFWGLSHIYPEILVSKFIQLLPYAYKIVGDIDLACNCLSSIIEEKVTYTTTSSKEYSEEAEQIKLGENRLGVDFITGKD YMDYSMNLRIEIGPIMNKPYQHYLKNGDIKIFIDCFCEHFFPMEVEVKTVLLINEETEEFNFSKEPVLGYTTRI
Sequences:
>Translated_314_residues MERKSKKSLEDLAYEIENISYDIRAEVIANELLENKAVVQDEITISNHGQFSRAYRSDILGAAIQDDNYDKQEYLNIRLS RDSMYDALPEGFVHSLTENNSDKSVKQMIREHKHQKKQEAEARVFFTPFENEIFHYRTKIESVERNFLYKLNGSKPLDFF YDFWGLSHIYPEILVSKFIQLLPYAYKIVGDIDLACNCLSSIIEEKVTYTTTSSKEYSEEAEQIKLGENRLGVDFITGKD YMDYSMNLRIEIGPIMNKPYQHYLKNGDIKIFIDCFCEHFFPMEVEVKTVLLINEETEEFNFSKEPVLGYTTRI >Mature_314_residues MERKSKKSLEDLAYEIENISYDIRAEVIANELLENKAVVQDEITISNHGQFSRAYRSDILGAAIQDDNYDKQEYLNIRLS RDSMYDALPEGFVHSLTENNSDKSVKQMIREHKHQKKQEAEARVFFTPFENEIFHYRTKIESVERNFLYKLNGSKPLDFF YDFWGLSHIYPEILVSKFIQLLPYAYKIVGDIDLACNCLSSIIEEKVTYTTTSSKEYSEEAEQIKLGENRLGVDFITGKD YMDYSMNLRIEIGPIMNKPYQHYLKNGDIKIFIDCFCEHFFPMEVEVKTVLLINEETEEFNFSKEPVLGYTTRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36840; Mature: 36840
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERKSKKSLEDLAYEIENISYDIRAEVIANELLENKAVVQDEITISNHGQFSRAYRSDIL CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEECEEECCCCCHHHHHHHHHH GAAIQDDNYDKQEYLNIRLSRDSMYDALPEGFVHSLTENNSDKSVKQMIREHKHQKKQEA HCEECCCCCCCHHHEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC EARVFFTPFENEIFHYRTKIESVERNFLYKLNGSKPLDFFYDFWGLSHIYPEILVSKFIQ CCEEEEECCCCHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHCHHHHHHHHHHHHHHH LLPYAYKIVGDIDLACNCLSSIIEEKVTYTTTSSKEYSEEAEQIKLGENRLGVDFITGKD HHHHHHHHHCCHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHHHCCCCCCCEEEEECCC YMDYSMNLRIEIGPIMNKPYQHYLKNGDIKIFIDCFCEHFFPMEVEVKTVLLINEETEEF CCCEEEEEEEEECCCCCCCHHHHHCCCCEEEEHHHHHHHCCCCEEEEEEEEEEECCHHHC NFSKEPVLGYTTRI CCCCCCCCCEECCC >Mature Secondary Structure MERKSKKSLEDLAYEIENISYDIRAEVIANELLENKAVVQDEITISNHGQFSRAYRSDIL CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEECEEECCCCCHHHHHHHHHH GAAIQDDNYDKQEYLNIRLSRDSMYDALPEGFVHSLTENNSDKSVKQMIREHKHQKKQEA HCEECCCCCCCHHHEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC EARVFFTPFENEIFHYRTKIESVERNFLYKLNGSKPLDFFYDFWGLSHIYPEILVSKFIQ CCEEEEECCCCHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHCHHHHHHHHHHHHHHH LLPYAYKIVGDIDLACNCLSSIIEEKVTYTTTSSKEYSEEAEQIKLGENRLGVDFITGKD HHHHHHHHHCCHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHHHCCCCCCCEEEEECCC YMDYSMNLRIEIGPIMNKPYQHYLKNGDIKIFIDCFCEHFFPMEVEVKTVLLINEETEEF CCCEEEEEEEEECCCCCCCHHHHHCCCCEEEEHHHHHHHCCCCEEEEEEEEEEECCHHHC NFSKEPVLGYTTRI CCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA