Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301022

Identifier: 146301022

GI number: 146301022

Start: 3917665

End: 3918609

Strand: Reverse

Name: 146301022

Synonym: Fjoh_3278

Alternate gene names: NA

Gene position: 3918609-3917665 (Counterclockwise)

Preceding gene: 146301023

Following gene: 146301021

Centisome position: 64.27

GC content: 33.44

Gene sequence:

>945_bases
ATGGAAAGAAAAAGTAAAAAAAGCCTTGAAGATCTTGCGTACGAAATTGAAAATATTTCGTATGATATTAGAGCGGAAGT
GATTGCTAATGAGCTTCTTGAAAACAAAGCTGTGGTTCAGGATGAAATTACGATTTCGAATCACGGACAGTTTTCACGTG
CCTACAGAAGCGATATTCTGGGAGCGGCAATTCAGGATGATAATTACGACAAACAAGAATATCTAAATATACGCTTATCT
CGAGACAGTATGTATGACGCACTTCCGGAAGGTTTTGTGCATAGTCTGACCGAAAATAACTCTGATAAATCTGTAAAACA
GATGATAAGGGAGCATAAACACCAGAAAAAGCAAGAGGCTGAAGCACGTGTTTTTTTTACTCCTTTTGAAAACGAAATTT
TTCATTATCGGACTAAAATTGAAAGTGTTGAAAGGAATTTTTTGTATAAGCTGAACGGGAGTAAACCGTTAGATTTTTTC
TATGATTTTTGGGGTTTATCACACATTTATCCAGAGATTTTAGTTTCAAAATTTATTCAGTTACTGCCGTATGCCTACAA
GATAGTTGGAGATATTGATCTTGCCTGTAATTGTTTATCAAGCATTATAGAAGAAAAAGTAACCTATACAACAACAAGTT
CTAAAGAATACAGCGAAGAAGCTGAGCAGATAAAGCTGGGTGAAAACAGGTTAGGAGTCGATTTTATTACCGGAAAAGAT
TATATGGATTATTCTATGAATTTAAGGATAGAAATAGGTCCTATAATGAACAAACCTTATCAGCATTACCTTAAAAACGG
CGATATAAAAATATTTATAGATTGTTTTTGCGAACATTTTTTTCCAATGGAAGTAGAAGTAAAAACAGTGTTATTGATTA
ATGAAGAAACAGAAGAGTTTAATTTTAGTAAAGAACCTGTGTTAGGGTATACAACACGAATTTAG

Upstream 100 bases:

>100_bases
GACCGAATTCTGGCTTGTACAGACAAAGGTCTGGCAATATATAATTTTAATGATGAATATTTTCAGTTACGATACATAGG
CGCAGGACGAATTAACGAAG

Downstream 100 bases:

>100_bases
TAATGGTAAAAAAGCATTTATTAGCCCTTATTGATATTAGGCTTATTGTATTTTTAGTAGTAATTATAGCGGTAAGTTTT
ATACTTACCATGGTATTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MERKSKKSLEDLAYEIENISYDIRAEVIANELLENKAVVQDEITISNHGQFSRAYRSDILGAAIQDDNYDKQEYLNIRLS
RDSMYDALPEGFVHSLTENNSDKSVKQMIREHKHQKKQEAEARVFFTPFENEIFHYRTKIESVERNFLYKLNGSKPLDFF
YDFWGLSHIYPEILVSKFIQLLPYAYKIVGDIDLACNCLSSIIEEKVTYTTTSSKEYSEEAEQIKLGENRLGVDFITGKD
YMDYSMNLRIEIGPIMNKPYQHYLKNGDIKIFIDCFCEHFFPMEVEVKTVLLINEETEEFNFSKEPVLGYTTRI

Sequences:

>Translated_314_residues
MERKSKKSLEDLAYEIENISYDIRAEVIANELLENKAVVQDEITISNHGQFSRAYRSDILGAAIQDDNYDKQEYLNIRLS
RDSMYDALPEGFVHSLTENNSDKSVKQMIREHKHQKKQEAEARVFFTPFENEIFHYRTKIESVERNFLYKLNGSKPLDFF
YDFWGLSHIYPEILVSKFIQLLPYAYKIVGDIDLACNCLSSIIEEKVTYTTTSSKEYSEEAEQIKLGENRLGVDFITGKD
YMDYSMNLRIEIGPIMNKPYQHYLKNGDIKIFIDCFCEHFFPMEVEVKTVLLINEETEEFNFSKEPVLGYTTRI
>Mature_314_residues
MERKSKKSLEDLAYEIENISYDIRAEVIANELLENKAVVQDEITISNHGQFSRAYRSDILGAAIQDDNYDKQEYLNIRLS
RDSMYDALPEGFVHSLTENNSDKSVKQMIREHKHQKKQEAEARVFFTPFENEIFHYRTKIESVERNFLYKLNGSKPLDFF
YDFWGLSHIYPEILVSKFIQLLPYAYKIVGDIDLACNCLSSIIEEKVTYTTTSSKEYSEEAEQIKLGENRLGVDFITGKD
YMDYSMNLRIEIGPIMNKPYQHYLKNGDIKIFIDCFCEHFFPMEVEVKTVLLINEETEEFNFSKEPVLGYTTRI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36840; Mature: 36840

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERKSKKSLEDLAYEIENISYDIRAEVIANELLENKAVVQDEITISNHGQFSRAYRSDIL
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEECEEECCCCCHHHHHHHHHH
GAAIQDDNYDKQEYLNIRLSRDSMYDALPEGFVHSLTENNSDKSVKQMIREHKHQKKQEA
HCEECCCCCCCHHHEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
EARVFFTPFENEIFHYRTKIESVERNFLYKLNGSKPLDFFYDFWGLSHIYPEILVSKFIQ
CCEEEEECCCCHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHCHHHHHHHHHHHHHHH
LLPYAYKIVGDIDLACNCLSSIIEEKVTYTTTSSKEYSEEAEQIKLGENRLGVDFITGKD
HHHHHHHHHCCHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHHHCCCCCCCEEEEECCC
YMDYSMNLRIEIGPIMNKPYQHYLKNGDIKIFIDCFCEHFFPMEVEVKTVLLINEETEEF
CCCEEEEEEEEECCCCCCCHHHHHCCCCEEEEHHHHHHHCCCCEEEEEEEEEEECCHHHC
NFSKEPVLGYTTRI
CCCCCCCCCEECCC
>Mature Secondary Structure
MERKSKKSLEDLAYEIENISYDIRAEVIANELLENKAVVQDEITISNHGQFSRAYRSDIL
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEECEEECCCCCHHHHHHHHHH
GAAIQDDNYDKQEYLNIRLSRDSMYDALPEGFVHSLTENNSDKSVKQMIREHKHQKKQEA
HCEECCCCCCCHHHEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
EARVFFTPFENEIFHYRTKIESVERNFLYKLNGSKPLDFFYDFWGLSHIYPEILVSKFIQ
CCEEEEECCCCHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHCHHHHHHHHHHHHHHH
LLPYAYKIVGDIDLACNCLSSIIEEKVTYTTTSSKEYSEEAEQIKLGENRLGVDFITGKD
HHHHHHHHHCCHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHHHCCCCCCCEEEEECCC
YMDYSMNLRIEIGPIMNKPYQHYLKNGDIKIFIDCFCEHFFPMEVEVKTVLLINEETEEF
CCCEEEEEEEEECCCCCCCHHHHHCCCCEEEEHHHHHHHCCCCEEEEEEEEEEECCHHHC
NFSKEPVLGYTTRI
CCCCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA