| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301021
Identifier: 146301021
GI number: 146301021
Start: 3916691
End: 3917662
Strand: Reverse
Name: 146301021
Synonym: Fjoh_3277
Alternate gene names: NA
Gene position: 3917662-3916691 (Counterclockwise)
Preceding gene: 146301022
Following gene: 146301020
Centisome position: 64.26
GC content: 30.04
Gene sequence:
>972_bases ATGGTAAAAAAGCATTTATTAGCCCTTATTGATATTAGGCTTATTGTATTTTTAGTAGTAATTATAGCGGTAAGTTTTAT ACTTACCATGGTATTCAGCGATAAAATAAAAGAATTTGCGGTACAGTATAAAAGAAAGTTTTACATCTATGTTTTTTCAT TTGTATTGATTTATGCCCTGGTTGGTTTTTTGGGCTATAATAAATTATTTACAGAGTTGTCAGACGAGTTTCGATTTTAT CAAATTGCATCACTGCTATTCGGAATCCTTAATGTTTACTTGTATAGATGGTATTTTAATGAGTTTAATTTAAAAGGCGT TGTAGGTATCGAATTATTGTTTTCACTTTTAATAACACTTTATTCAAGTGTATTATTTGTGATTATTTATACTGCCTTAA ACGGGATTGCACTGACGTTTTTAATGTGTTCTCATTTCTTGGTATTTATAGTACCGACAGGCGTTTATGCAGTTTTTAAC TATATGATGCAGATACCTCCGAAAGAATATGTTACATGGAAAATTCCGGAAAGAAAAAATCCCTTTCCTGAGATTGAAAA CGTTGAAATGAAAGATTTATTGTTGATTACCCTATTAATTCAGAAAAAAGAAACCGATACAAAATATACTTCTTTAAGAT CCAAAGGTCCAGTAAGAATTGATTTTGGTGCACTGTTTTATCATACGGTTTCAGGATATAATGAACATAATGCCGATAGT AAAATTGATTTAAAAGAAAACGGCGAAAATTGCAGCTGGGTATTCTTTTTACAGCCAAAATGGTATCAAACGGCAAAATA TGTAGATGCAAAATATACTTTGAGCATGAATGGTATTACTGAAAACTCAGTTATCATTTGTAAAAGACAAAAGATTAAAA AAGTTAATCAAACAAAAAAAGCAGAAGGAAAAGGAGAAGATTTTATGTTTGAACCAAAGGTTGAAAAGAAGGAAAAAGAG GCTGCAGTTTAA
Upstream 100 bases:
>100_bases TGGAAGTAGAAGTAAAAACAGTGTTATTGATTAATGAAGAAACAGAAGAGTTTAATTTTAGTAAAGAACCTGTGTTAGGG TATACAACACGAATTTAGTA
Downstream 100 bases:
>100_bases TATTTTTTGAAATGTTATGTACTATATAGATAAACCTGAAAAGTCATCATACGACAAGTTTCGTATTTATAAAATCAAGA AAGGAGATACGCTCGAAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MVKKHLLALIDIRLIVFLVVIIAVSFILTMVFSDKIKEFAVQYKRKFYIYVFSFVLIYALVGFLGYNKLFTELSDEFRFY QIASLLFGILNVYLYRWYFNEFNLKGVVGIELLFSLLITLYSSVLFVIIYTALNGIALTFLMCSHFLVFIVPTGVYAVFN YMMQIPPKEYVTWKIPERKNPFPEIENVEMKDLLLITLLIQKKETDTKYTSLRSKGPVRIDFGALFYHTVSGYNEHNADS KIDLKENGENCSWVFFLQPKWYQTAKYVDAKYTLSMNGITENSVIICKRQKIKKVNQTKKAEGKGEDFMFEPKVEKKEKE AAV
Sequences:
>Translated_323_residues MVKKHLLALIDIRLIVFLVVIIAVSFILTMVFSDKIKEFAVQYKRKFYIYVFSFVLIYALVGFLGYNKLFTELSDEFRFY QIASLLFGILNVYLYRWYFNEFNLKGVVGIELLFSLLITLYSSVLFVIIYTALNGIALTFLMCSHFLVFIVPTGVYAVFN YMMQIPPKEYVTWKIPERKNPFPEIENVEMKDLLLITLLIQKKETDTKYTSLRSKGPVRIDFGALFYHTVSGYNEHNADS KIDLKENGENCSWVFFLQPKWYQTAKYVDAKYTLSMNGITENSVIICKRQKIKKVNQTKKAEGKGEDFMFEPKVEKKEKE AAV >Mature_323_residues MVKKHLLALIDIRLIVFLVVIIAVSFILTMVFSDKIKEFAVQYKRKFYIYVFSFVLIYALVGFLGYNKLFTELSDEFRFY QIASLLFGILNVYLYRWYFNEFNLKGVVGIELLFSLLITLYSSVLFVIIYTALNGIALTFLMCSHFLVFIVPTGVYAVFN YMMQIPPKEYVTWKIPERKNPFPEIENVEMKDLLLITLLIQKKETDTKYTSLRSKGPVRIDFGALFYHTVSGYNEHNADS KIDLKENGENCSWVFFLQPKWYQTAKYVDAKYTLSMNGITENSVIICKRQKIKKVNQTKKAEGKGEDFMFEPKVEKKEKE AAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37725; Mature: 37725
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKKHLLALIDIRLIVFLVVIIAVSFILTMVFSDKIKEFAVQYKRKFYIYVFSFVLIYAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGFLGYNKLFTELSDEFRFYQIASLLFGILNVYLYRWYFNEFNLKGVVGIELLFSLLITL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH YSSVLFVIIYTALNGIALTFLMCSHFLVFIVPTGVYAVFNYMMQIPPKEYVTWKIPERKN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCC PFPEIENVEMKDLLLITLLIQKKETDTKYTSLRSKGPVRIDFGALFYHTVSGYNEHNADS CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEHHHHHHHHHCCCCCCCCCC KIDLKENGENCSWVFFLQPKWYQTAKYVDAKYTLSMNGITENSVIICKRQKIKKVNQTKK EEECCCCCCCEEEEEEECCCHHHHHHHCCCEEEEEECCCCCCCEEEEEHHHHHHHHHHHC AEGKGEDFMFEPKVEKKEKEAAV CCCCCCCCEECCCCHHHHHHCCC >Mature Secondary Structure MVKKHLLALIDIRLIVFLVVIIAVSFILTMVFSDKIKEFAVQYKRKFYIYVFSFVLIYAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGFLGYNKLFTELSDEFRFYQIASLLFGILNVYLYRWYFNEFNLKGVVGIELLFSLLITL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH YSSVLFVIIYTALNGIALTFLMCSHFLVFIVPTGVYAVFNYMMQIPPKEYVTWKIPERKN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCC PFPEIENVEMKDLLLITLLIQKKETDTKYTSLRSKGPVRIDFGALFYHTVSGYNEHNADS CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEHHHHHHHHHCCCCCCCCCC KIDLKENGENCSWVFFLQPKWYQTAKYVDAKYTLSMNGITENSVIICKRQKIKKVNQTKK EEECCCCCCCEEEEEEECCCHHHHHHHCCCEEEEEECCCCCCCEEEEEHHHHHHHHHHHC AEGKGEDFMFEPKVEKKEKEAAV CCCCCCCCEECCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA