| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301017
Identifier: 146301017
GI number: 146301017
Start: 3911564
End: 3912304
Strand: Reverse
Name: 146301017
Synonym: Fjoh_3273
Alternate gene names: NA
Gene position: 3912304-3911564 (Counterclockwise)
Preceding gene: 146301018
Following gene: 146301016
Centisome position: 64.17
GC content: 27.13
Gene sequence:
>741_bases ATGAAAAAAATTTATATAGTTCTGGGATGTTTGATTTTATTTTCTGCATGTACAAAGCATAAAGAAGAAAAGAAAACAAC CATAATTAAAAATGAAAATATTGTTGCGAAAAATATAGTAAACGATGAACCCGTTGGGTTAAATGATGATTGTTCGTCAG ATCCAATAGAAACACTTATTACTGAATATAATGGTATTAGTTTTTATACTGATAATACTTTGAGAGGAACAGGTGTAGTT CAGTTATTAGTAGATAAGAATGTTAATATTCTTAATGAAGATAAAAGTATATTTGGAAGTATATTATTAAGTAATAATGA GTTGGAACCTTATGAAATAAAACTTACTAAAAAAGTTATTGCACGAGAAGTAATTCCAGATATTGAGCATAGAATCTTTA GCTTCGACGCAGAACAACCTGAAAACGATAAGGACTTTTTAATTATCTATATAAATGGCGAAAGAAAATTGATGGAGAAG AAAAATAATAAATATAAGTACAGCTCATGGGAAGAGTATATAAAAGCTGGATTTATTCATCTTACTCCCAAAATAGATAA TTGTACAAAAGATGAACAGATGTATTATTATAAAGTTTTGAAAATTAAGAACGATTCGATGCAGATTAAATCTGTATCCA AAACTAGTTGTGATTATGTAGAGGAATATAAAGATGTCACAAAATGGATTAAATGGAAAAACGATTCTTGCAAGTTTGTC ATGTTTGATTTTTGTTATTAA
Upstream 100 bases:
>100_bases TACTTAAAAATTCAACTCATTTAGCTGATCATCACCACCATTTGCACATTCGAAGAGAGGGATATAAACCAAATTTTAAA GAAACAAAAGAATAGTTATT
Downstream 100 bases:
>100_bases AATTTATTGATATGAAAAATTTAATTGTTTTTTTTATAATTATTATTTTTTTCTCTTCCTGCAAAAAAGAAATTAAAAAC ACTGTTTCTGTAGGAGATAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MKKIYIVLGCLILFSACTKHKEEKKTTIIKNENIVAKNIVNDEPVGLNDDCSSDPIETLITEYNGISFYTDNTLRGTGVV QLLVDKNVNILNEDKSIFGSILLSNNELEPYEIKLTKKVIAREVIPDIEHRIFSFDAEQPENDKDFLIIYINGERKLMEK KNNKYKYSSWEEYIKAGFIHLTPKIDNCTKDEQMYYYKVLKIKNDSMQIKSVSKTSCDYVEEYKDVTKWIKWKNDSCKFV MFDFCY
Sequences:
>Translated_246_residues MKKIYIVLGCLILFSACTKHKEEKKTTIIKNENIVAKNIVNDEPVGLNDDCSSDPIETLITEYNGISFYTDNTLRGTGVV QLLVDKNVNILNEDKSIFGSILLSNNELEPYEIKLTKKVIAREVIPDIEHRIFSFDAEQPENDKDFLIIYINGERKLMEK KNNKYKYSSWEEYIKAGFIHLTPKIDNCTKDEQMYYYKVLKIKNDSMQIKSVSKTSCDYVEEYKDVTKWIKWKNDSCKFV MFDFCY >Mature_246_residues MKKIYIVLGCLILFSACTKHKEEKKTTIIKNENIVAKNIVNDEPVGLNDDCSSDPIETLITEYNGISFYTDNTLRGTGVV QLLVDKNVNILNEDKSIFGSILLSNNELEPYEIKLTKKVIAREVIPDIEHRIFSFDAEQPENDKDFLIIYINGERKLMEK KNNKYKYSSWEEYIKAGFIHLTPKIDNCTKDEQMYYYKVLKIKNDSMQIKSVSKTSCDYVEEYKDVTKWIKWKNDSCKFV MFDFCY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28793; Mature: 28793
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIYIVLGCLILFSACTKHKEEKKTTIIKNENIVAKNIVNDEPVGLNDDCSSDPIETLI CCEEEHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEECCCCCCCCCCCCCCCCCHHHHHH TEYNGISFYTDNTLRGTGVVQLLVDKNVNILNEDKSIFGSILLSNNELEPYEIKLTKKVI HHCCCEEEEECCCCCCCCEEEEEEECCCCEECCCHHHHEEEEECCCCCCCEEEEHHHHHH AREVIPDIEHRIFSFDAEQPENDKDFLIIYINGERKLMEKKNNKYKYSSWEEYIKAGFIH HHHHHHHHHHHHEECCCCCCCCCCCEEEEEECCCHHHHHHCCCCCCCCCHHHHHHCCEEE LTPKIDNCTKDEQMYYYKVLKIKNDSMQIKSVSKTSCDYVEEYKDVTKWIKWKNDSCKFV ECCCCCCCCCCCCEEEEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEE MFDFCY EEEECC >Mature Secondary Structure MKKIYIVLGCLILFSACTKHKEEKKTTIIKNENIVAKNIVNDEPVGLNDDCSSDPIETLI CCEEEHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEECCCCCCCCCCCCCCCCCHHHHHH TEYNGISFYTDNTLRGTGVVQLLVDKNVNILNEDKSIFGSILLSNNELEPYEIKLTKKVI HHCCCEEEEECCCCCCCCEEEEEEECCCCEECCCHHHHEEEEECCCCCCCEEEEHHHHHH AREVIPDIEHRIFSFDAEQPENDKDFLIIYINGERKLMEKKNNKYKYSSWEEYIKAGFIH HHHHHHHHHHHHEECCCCCCCCCCCEEEEEECCCHHHHHHCCCCCCCCCHHHHHHCCEEE LTPKIDNCTKDEQMYYYKVLKIKNDSMQIKSVSKTSCDYVEEYKDVTKWIKWKNDSCKFV ECCCCCCCCCCCCEEEEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEE MFDFCY EEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA