| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301016
Identifier: 146301016
GI number: 146301016
Start: 3910884
End: 3911552
Strand: Reverse
Name: 146301016
Synonym: Fjoh_3272
Alternate gene names: NA
Gene position: 3911552-3910884 (Counterclockwise)
Preceding gene: 146301017
Following gene: 146301015
Centisome position: 64.16
GC content: 23.92
Gene sequence:
>669_bases ATGAAAAATTTAATTGTTTTTTTTATAATTATTATTTTTTTCTCTTCCTGCAAAAAAGAAATTAAAAACACTGTTTCTGT AGGAGATAGAAATACGCAAACTGAAACTTTGAATTCTGCTTCAAACAATAACTTACAAGGTTTTTATAAATCAGATAAGG AAGTTTTTTTAGGGGATTCTGTTTTAGCAATAAAAAACTATTTTGAAAATTTAAATAATAATACAGGATATGTAATACTA AAAAAACAAAATGAATTATATCTAAAGAATTATTCAAATTTTTTAAATAATGATATTCCTCAAATTAGTTCTAGCACAAA TATCAAACTTAAGTTTGAGAAACAATTATTTAAAAGTAAAAATGAATATAGAATTGTGCTTTATACATTTTTAAATGATA AAAAAATTGATTCTGTTGAGTTTTATAGAAATGTAACAGCTTTAGAGTACGAGCCAAGTAGTTACACAAATTTGTCTTAT TTGAATTTAAAGAATGGCAAAATTTGGCAGATTAAATATTTTTCAAGTCCAGTTGATAAGTCCATAGGTTATATATTTTA CGGAAGAAAGGAGATACTTCAAAGTGGAAAAGTAGAAACGGATTCATTGTACTATCTCGATGAATCTCTAGATGTCGAAA TGGAGAAAAATAAATTGTATTATAATTAG
Upstream 100 bases:
>100_bases ATTATGTAGAGGAATATAAAGATGTCACAAAATGGATTAAATGGAAAAACGATTCTTGCAAGTTTGTCATGTTTGATTTT TGTTATTAAAATTTATTGAT
Downstream 100 bases:
>100_bases AAATGATTCTTAATAAATAAAAAAGATAATTGTAATTAAAGCTCCTTGACATATTGAAAAGAAAAGCCCCAGCTAGCAGG AGTTTTACGCTTTTGTTAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MKNLIVFFIIIIFFSSCKKEIKNTVSVGDRNTQTETLNSASNNNLQGFYKSDKEVFLGDSVLAIKNYFENLNNNTGYVIL KKQNELYLKNYSNFLNNDIPQISSSTNIKLKFEKQLFKSKNEYRIVLYTFLNDKKIDSVEFYRNVTALEYEPSSYTNLSY LNLKNGKIWQIKYFSSPVDKSIGYIFYGRKEILQSGKVETDSLYYLDESLDVEMEKNKLYYN
Sequences:
>Translated_222_residues MKNLIVFFIIIIFFSSCKKEIKNTVSVGDRNTQTETLNSASNNNLQGFYKSDKEVFLGDSVLAIKNYFENLNNNTGYVIL KKQNELYLKNYSNFLNNDIPQISSSTNIKLKFEKQLFKSKNEYRIVLYTFLNDKKIDSVEFYRNVTALEYEPSSYTNLSY LNLKNGKIWQIKYFSSPVDKSIGYIFYGRKEILQSGKVETDSLYYLDESLDVEMEKNKLYYN >Mature_222_residues MKNLIVFFIIIIFFSSCKKEIKNTVSVGDRNTQTETLNSASNNNLQGFYKSDKEVFLGDSVLAIKNYFENLNNNTGYVIL KKQNELYLKNYSNFLNNDIPQISSSTNIKLKFEKQLFKSKNEYRIVLYTFLNDKKIDSVEFYRNVTALEYEPSSYTNLSY LNLKNGKIWQIKYFSSPVDKSIGYIFYGRKEILQSGKVETDSLYYLDESLDVEMEKNKLYYN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26065; Mature: 26065
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLIVFFIIIIFFSSCKKEIKNTVSVGDRNTQTETLNSASNNNLQGFYKSDKEVFLGDS CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCEEECCCCEEEECCC VLAIKNYFENLNNNTGYVILKKQNELYLKNYSNFLNNDIPQISSSTNIKLKFEKQLFKSK HHHHHHHHHHCCCCCCEEEEEECCCEEEHHHHHHHCCCCCCCCCCCEEEEEEHHHHHCCC NEYRIVLYTFLNDKKIDSVEFYRNVTALEYEPSSYTNLSYLNLKNGKIWQIKYFSSPVDK CCEEEEEEEEECCCCCCHHHHHHCCEEEEECCCCCCCEEEEEECCCEEEEEEECCCCCCC SIGYIFYGRKEILQSGKVETDSLYYLDESLDVEMEKNKLYYN CCCEEEECHHHHHHCCCCCCCEEEEECCCCCEEEECCEEECC >Mature Secondary Structure MKNLIVFFIIIIFFSSCKKEIKNTVSVGDRNTQTETLNSASNNNLQGFYKSDKEVFLGDS CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCEEECCCCEEEECCC VLAIKNYFENLNNNTGYVILKKQNELYLKNYSNFLNNDIPQISSSTNIKLKFEKQLFKSK HHHHHHHHHHCCCCCCEEEEEECCCEEEHHHHHHHCCCCCCCCCCCEEEEEEHHHHHCCC NEYRIVLYTFLNDKKIDSVEFYRNVTALEYEPSSYTNLSYLNLKNGKIWQIKYFSSPVDK CCEEEEEEEEECCCCCCHHHHHHCCEEEEECCCCCCCEEEEEECCCEEEEEEECCCCCCC SIGYIFYGRKEILQSGKVETDSLYYLDESLDVEMEKNKLYYN CCCEEEECHHHHHHCCCCCCCEEEEECCCCCEEEECCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA