| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301015
Identifier: 146301015
GI number: 146301015
Start: 3909608
End: 3910762
Strand: Reverse
Name: 146301015
Synonym: Fjoh_3271
Alternate gene names: NA
Gene position: 3910762-3909608 (Counterclockwise)
Preceding gene: 146301016
Following gene: 146301014
Centisome position: 64.14
GC content: 25.11
Gene sequence:
>1155_bases ATGAAAAATATAATTTCTTTAATAATTCTGTTGCTAGTTTCTTGTACTGGAAAAACAGACAGCAAAAAAAATAATTTAGG GAATTCTAATGATTCAAAAGATGCCCCTTATAATTTAACGGATTTAGGAGATGGTAAAAAGTTTAATTATGATACTTTGT CTGTAGATTATATTAACAGGTTAAAAACAAGCCTCATAAACAATAATTTTAAATTTCCAGATGAACAAACATTTAAAAAA AGAACTCTAGAGGTTTTTAAAATAAATTTGTATGATTATAAAAACAATATTATTGTTTTGAGACCAGCAATGTTTACTGA AATAGCAATCAAAGAAAGTAAATTTATCTTAATTGAAGATGAAGAAACTGATGGTATTAAAAATGCAGTTAATGAAAACC TTGAACTTTATTATAATTCTTATGTATTCTATGAGGATAAAATCGCATTTAATTGGTTGAAATCTCGTTATAAACAGCAG TTAATAGATTTAGTTGTACAATATGGTTATGATTCTGATAAAGAGTTAGTGAGATTTGTATTTAAAAATTTCGATTTTGA TGATAGCGTTTCATTCCATGATTTAATTTTTACATACGATGTAAAATCTAAAAAGTATATTTTAAGAGAAAGTATTCTAA ATGATATTGAAAGTATTATCTATAAAGGAACAGTTGAAGGCTATACAGAGGCAAAAGAAGGTAATGGTTATAACAGTTTT TCTGATATAATTGAAAAAATAAGAAGTAATTCAAACAACTATTTAGATGCAGAAAAATACATTGCTTTCTTATATGAAAA AGATTTAAGAGTTGGTGTAGTAGGTCATATAGAATCTAATTTAAGTAAGAATACAAAGTATAAAACTTTTTTAAAGGAAA ATAATTACTTTAATCTTAAGAGACTTCAAGATTATGTAGAAAATGTTTATGGAGGAGATTCAGATTCCGATGAAGTAAGT AAGATTTTTAAAATCTCCGACCCAGATGGATTTACGAATCTTAGAAAAGAGAAAAATTCTTCATCAGAAATTTTACAAAA AATAAATAATAATGCAGAAGTTGAAGTATTAGATGATTCAGGTAATTGGTGGCTGATCAAAACAAGTTCTGGAAATAAAG GATATGTTTATAAAACTAAGATTAAAGTTGAATAA
Upstream 100 bases:
>100_bases AAAGATAATTGTAATTAAAGCTCCTTGACATATTGAAAAGAAAAGCCCCAGCTAGCAGGAGTTTTACGCTTTTGTTAGCT GAGGGAATTAATAAAAAAAG
Downstream 100 bases:
>100_bases TATAAAAAAGCATATTTGCTCCTTGACATATTGAAAAGAAAAGCCCCAGTTAGCAGGAGTTTTATGCTTTTGTTAGCTGA GGAATAATAAAATAGAATAA
Product: SH3 type 3 domain-containing protein
Products: NA
Alternate protein names: SH3 Type 3 Domain-Containing Protein
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MKNIISLIILLLVSCTGKTDSKKNNLGNSNDSKDAPYNLTDLGDGKKFNYDTLSVDYINRLKTSLINNNFKFPDEQTFKK RTLEVFKINLYDYKNNIIVLRPAMFTEIAIKESKFILIEDEETDGIKNAVNENLELYYNSYVFYEDKIAFNWLKSRYKQQ LIDLVVQYGYDSDKELVRFVFKNFDFDDSVSFHDLIFTYDVKSKKYILRESILNDIESIIYKGTVEGYTEAKEGNGYNSF SDIIEKIRSNSNNYLDAEKYIAFLYEKDLRVGVVGHIESNLSKNTKYKTFLKENNYFNLKRLQDYVENVYGGDSDSDEVS KIFKISDPDGFTNLRKEKNSSSEILQKINNNAEVEVLDDSGNWWLIKTSSGNKGYVYKTKIKVE
Sequences:
>Translated_384_residues MKNIISLIILLLVSCTGKTDSKKNNLGNSNDSKDAPYNLTDLGDGKKFNYDTLSVDYINRLKTSLINNNFKFPDEQTFKK RTLEVFKINLYDYKNNIIVLRPAMFTEIAIKESKFILIEDEETDGIKNAVNENLELYYNSYVFYEDKIAFNWLKSRYKQQ LIDLVVQYGYDSDKELVRFVFKNFDFDDSVSFHDLIFTYDVKSKKYILRESILNDIESIIYKGTVEGYTEAKEGNGYNSF SDIIEKIRSNSNNYLDAEKYIAFLYEKDLRVGVVGHIESNLSKNTKYKTFLKENNYFNLKRLQDYVENVYGGDSDSDEVS KIFKISDPDGFTNLRKEKNSSSEILQKINNNAEVEVLDDSGNWWLIKTSSGNKGYVYKTKIKVE >Mature_384_residues MKNIISLIILLLVSCTGKTDSKKNNLGNSNDSKDAPYNLTDLGDGKKFNYDTLSVDYINRLKTSLINNNFKFPDEQTFKK RTLEVFKINLYDYKNNIIVLRPAMFTEIAIKESKFILIEDEETDGIKNAVNENLELYYNSYVFYEDKIAFNWLKSRYKQQ LIDLVVQYGYDSDKELVRFVFKNFDFDDSVSFHDLIFTYDVKSKKYILRESILNDIESIIYKGTVEGYTEAKEGNGYNSF SDIIEKIRSNSNNYLDAEKYIAFLYEKDLRVGVVGHIESNLSKNTKYKTFLKENNYFNLKRLQDYVENVYGGDSDSDEVS KIFKISDPDGFTNLRKEKNSSSEILQKINNNAEVEVLDDSGNWWLIKTSSGNKGYVYKTKIKVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44691; Mature: 44691
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNIISLIILLLVSCTGKTDSKKNNLGNSNDSKDAPYNLTDLGDGKKFNYDTLSVDYINR CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHH LKTSLINNNFKFPDEQTFKKRTLEVFKINLYDYKNNIIVLRPAMFTEIAIKESKFILIED HHHHHHCCCCCCCCHHHHHHHCEEEEEEEEEEECCCEEEECCHHHHHEEEECCEEEEEEC EETDGIKNAVNENLELYYNSYVFYEDKIAFNWLKSRYKQQLIDLVVQYGYDSDKELVRFV CCCCHHHHHHCCCEEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH FKNFDFDDSVSFHDLIFTYDVKSKKYILRESILNDIESIIYKGTVEGYTEAKEGNGYNSF HHCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH SDIIEKIRSNSNNYLDAEKYIAFLYEKDLRVGVVGHIESNLSKNTKYKTFLKENNYFNLK HHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEEEHHHCCCCCCCEEEEEECCCCCCHH RLQDYVENVYGGDSDSDEVSKIFKISDPDGFTNLRKEKNSSSEILQKINNNAEVEVLDDS HHHHHHHHHCCCCCCHHHHHHEEEECCCCCHHHHHHHCCCHHHHHHHHCCCCEEEEEECC GNWWLIKTSSGNKGYVYKTKIKVE CCEEEEEECCCCCCEEEEEEEEEC >Mature Secondary Structure MKNIISLIILLLVSCTGKTDSKKNNLGNSNDSKDAPYNLTDLGDGKKFNYDTLSVDYINR CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHH LKTSLINNNFKFPDEQTFKKRTLEVFKINLYDYKNNIIVLRPAMFTEIAIKESKFILIED HHHHHHCCCCCCCCHHHHHHHCEEEEEEEEEEECCCEEEECCHHHHHEEEECCEEEEEEC EETDGIKNAVNENLELYYNSYVFYEDKIAFNWLKSRYKQQLIDLVVQYGYDSDKELVRFV CCCCHHHHHHCCCEEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH FKNFDFDDSVSFHDLIFTYDVKSKKYILRESILNDIESIIYKGTVEGYTEAKEGNGYNSF HHCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH SDIIEKIRSNSNNYLDAEKYIAFLYEKDLRVGVVGHIESNLSKNTKYKTFLKENNYFNLK HHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEEEHHHCCCCCCCEEEEEECCCCCCHH RLQDYVENVYGGDSDSDEVSKIFKISDPDGFTNLRKEKNSSSEILQKINNNAEVEVLDDS HHHHHHHHHCCCCCCHHHHHHEEEECCCCCHHHHHHHCCCHHHHHHHHCCCCEEEEEECC GNWWLIKTSSGNKGYVYKTKIKVE CCEEEEEECCCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA