Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146300966

Identifier: 146300966

GI number: 146300966

Start: 3838525

End: 3840075

Strand: Direct

Name: 146300966

Synonym: Fjoh_3221

Alternate gene names: NA

Gene position: 3838525-3840075 (Clockwise)

Preceding gene: 146300965

Following gene: 146300967

Centisome position: 62.96

GC content: 35.72

Gene sequence:

>1551_bases
ATGAGACTACGATTTTCTGAAAGCGAGATTATAAAAACGACCGTTGGAGATCACGATATTTTTTCTAATGAAGATATTAC
TGCAAACGCAGGAATGTACATACATGAATCGTGTGATGGAGAAATAATTTATGGAGACAATCCTAAAGAGGCGCCACCTG
CAGCAAAATATTTTGTAAAAGGCTGGTGGACTGATAAGCATGACAAGCCTATAAAGGAAGCCCGTATTTTGGACACGGTA
AAATTTCATATTCAAACCCAGGGAATAGAAAACCCAAAAGGAAAAAAGATAGAAATAAAACTGTTCGAATACGATACCTC
TGTTTATTTGTCATTGGGTACATATGGCTCAGGTGCAGTTGAAACCCGCCCTTTTGACGATCATGTAAGAATCGTATCAG
GTAAAAATGAGATAACAGAATTGACATTGGACGAAAACGGAAAAACAGCCATTACCATAAATTTGACTTGGGGAATGCAC
GAGATGTTTAATGAAACCTTTTTTGGCGGTTTTGCAGAAATGGGACTGTTAGAATTTTATTTCGAATGCTCTTACGGCGA
GGATAGAGGCATTTGGCTCCCCGCGAATTTGGGGGACTATTTGAAAGTGACAATTTCGAACCAAAGCCTCTTTATAAAGC
CTGCCTATGAGGGTTATAATTTTCCTGAAATTCGTACTGCCGAAGGAGATATTGTTGTTTTCTCAGCAGGGATAGGACTA
GAACACGAACCATCCAAAGAACTGGAAGGACAGCTAGATGCAATTGCAGACAAGATAAAAAGTGAAATTTATGGAAGTGT
GCGTGAAGCAATGATGAAGTATAGCGACAATATGCGCCATACCATTGCTGTAAGACAATTGAAGAAAGGGTATTTGGCAA
ACAACCTTGGAAAAATAGAGTTTAGCCGTAGGATTTATACCAAACCGGTTTACGATAATAGTGGCAAACTTTATGAAATA
ACAAAAGCAGCAAATTTTGGCTATAGAAAAGAAGGCAAAAAGGTAACCACAAAGGGAATAAGCCAGCTTGATTATTTTAG
GGAAGTAGGTGCTTTTAATGAAATAGCTAAAGCCTCTAAAGAATTACTAGGGATATTTAATTTCGCTTCAGATGTAATAA
GTTTTGCCATGGATGAAAACCCAAAAATAATTCCGACTGGGTTTGCGCCGCTAGATTTTCTTGTGGCTATGGTTATGCCT
AGTATCGCAGAATCTATACTAGAATCTTGGGATGCTCCTGTTTTTGAGTTAGTAGAAAAAGCAAAAGATAAAGGTATCGA
AGGTATTTATGATTTTTTACAAAGTTCAGGAGGGAAAGAGAAAAGATATGATTTCAACACAATGGATATAAATCAATACA
TGCTAAATCAGCTATTAATGGGCAAATTTAAAACTTTTGAAGAATTAACAAATGCTCAAGAGAATTTGAAAATAACAATG
GATCGGTATGATTATGAGAGTTCGTTAGTATATACTCTTTTTTATTATAAAAAAATAGATGAAGCAAAAGAGGAAGAGTT
ATTAATAATTGATACTATTTTTTTTAATTAA

Upstream 100 bases:

>100_bases
AGTTGAAACAAGCAGTGAAGGCTCTATTAGTAAACATGCGCAAAAAAACTTGAATAACAATAGCGGAGAAAATTCGACCC
ACAACTAAAACATTGAAAAT

Downstream 100 bases:

>100_bases
TAAAAATTGAAAATTATGAAAAGACTATATTTTTATTTAGGAATTCTTTTAACTATGTTTTCTTGTAATATACATGAACC
AATTTCTGTCAAAGAAAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 516; Mature: 516

Protein sequence:

>516_residues
MRLRFSESEIIKTTVGDHDIFSNEDITANAGMYIHESCDGEIIYGDNPKEAPPAAKYFVKGWWTDKHDKPIKEARILDTV
KFHIQTQGIENPKGKKIEIKLFEYDTSVYLSLGTYGSGAVETRPFDDHVRIVSGKNEITELTLDENGKTAITINLTWGMH
EMFNETFFGGFAEMGLLEFYFECSYGEDRGIWLPANLGDYLKVTISNQSLFIKPAYEGYNFPEIRTAEGDIVVFSAGIGL
EHEPSKELEGQLDAIADKIKSEIYGSVREAMMKYSDNMRHTIAVRQLKKGYLANNLGKIEFSRRIYTKPVYDNSGKLYEI
TKAANFGYRKEGKKVTTKGISQLDYFREVGAFNEIAKASKELLGIFNFASDVISFAMDENPKIIPTGFAPLDFLVAMVMP
SIAESILESWDAPVFELVEKAKDKGIEGIYDFLQSSGGKEKRYDFNTMDINQYMLNQLLMGKFKTFEELTNAQENLKITM
DRYDYESSLVYTLFYYKKIDEAKEEELLIIDTIFFN

Sequences:

>Translated_516_residues
MRLRFSESEIIKTTVGDHDIFSNEDITANAGMYIHESCDGEIIYGDNPKEAPPAAKYFVKGWWTDKHDKPIKEARILDTV
KFHIQTQGIENPKGKKIEIKLFEYDTSVYLSLGTYGSGAVETRPFDDHVRIVSGKNEITELTLDENGKTAITINLTWGMH
EMFNETFFGGFAEMGLLEFYFECSYGEDRGIWLPANLGDYLKVTISNQSLFIKPAYEGYNFPEIRTAEGDIVVFSAGIGL
EHEPSKELEGQLDAIADKIKSEIYGSVREAMMKYSDNMRHTIAVRQLKKGYLANNLGKIEFSRRIYTKPVYDNSGKLYEI
TKAANFGYRKEGKKVTTKGISQLDYFREVGAFNEIAKASKELLGIFNFASDVISFAMDENPKIIPTGFAPLDFLVAMVMP
SIAESILESWDAPVFELVEKAKDKGIEGIYDFLQSSGGKEKRYDFNTMDINQYMLNQLLMGKFKTFEELTNAQENLKITM
DRYDYESSLVYTLFYYKKIDEAKEEELLIIDTIFFN
>Mature_516_residues
MRLRFSESEIIKTTVGDHDIFSNEDITANAGMYIHESCDGEIIYGDNPKEAPPAAKYFVKGWWTDKHDKPIKEARILDTV
KFHIQTQGIENPKGKKIEIKLFEYDTSVYLSLGTYGSGAVETRPFDDHVRIVSGKNEITELTLDENGKTAITINLTWGMH
EMFNETFFGGFAEMGLLEFYFECSYGEDRGIWLPANLGDYLKVTISNQSLFIKPAYEGYNFPEIRTAEGDIVVFSAGIGL
EHEPSKELEGQLDAIADKIKSEIYGSVREAMMKYSDNMRHTIAVRQLKKGYLANNLGKIEFSRRIYTKPVYDNSGKLYEI
TKAANFGYRKEGKKVTTKGISQLDYFREVGAFNEIAKASKELLGIFNFASDVISFAMDENPKIIPTGFAPLDFLVAMVMP
SIAESILESWDAPVFELVEKAKDKGIEGIYDFLQSSGGKEKRYDFNTMDINQYMLNQLLMGKFKTFEELTNAQENLKITM
DRYDYESSLVYTLFYYKKIDEAKEEELLIIDTIFFN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58845; Mature: 58845

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLRFSESEIIKTTVGDHDIFSNEDITANAGMYIHESCDGEIIYGDNPKEAPPAAKYFVK
CCEECCCCCEEEEECCCCCCCCCCCCEECCCEEEEECCCCEEEECCCCCCCCCHHHHEEE
GWWTDKHDKPIKEARILDTVKFHIQTQGIENPKGKKIEIKLFEYDTSVYLSLGTYGSGAV
EEECCCCCCCHHHHHHHHEEEEEEEECCCCCCCCCEEEEEEEEECCEEEEEECCCCCCCC
ETRPFDDHVRIVSGKNEITELTLDENGKTAITINLTWGMHEMFNETFFGGFAEMGLLEFY
CCCCCCCCEEEEECCCCEEEEEECCCCCEEEEEEEECCHHHHHHHHHCCCHHHHHHEEEE
FECSYGEDRGIWLPANLGDYLKVTISNQSLFIKPAYEGYNFPEIRTAEGDIVVFSAGIGL
EEECCCCCCCEEEECCCCCEEEEEECCCEEEEEECCCCCCCCCEEECCCCEEEEECCCCC
EHEPSKELEGQLDAIADKIKSEIYGSVREAMMKYSDNMRHTIAVRQLKKGYLANNLGKIE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEE
FSRRIYTKPVYDNSGKLYEITKAANFGYRKEGKKVTTKGISQLDYFREVGAFNEIAKASK
ECCEEEECCCCCCCCCEEEEEECCCCCCCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHH
ELLGIFNFASDVISFAMDENPKIIPTGFAPLDFLVAMVMPSIAESILESWDAPVFELVEK
HHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
AKDKGIEGIYDFLQSSGGKEKRYDFNTMDINQYMLNQLLMGKFKTFEELTNAQENLKITM
HHHCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
DRYDYESSLVYTLFYYKKIDEAKEEELLIIDTIFFN
EECCCCCCEEEEEHHHHHHCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MRLRFSESEIIKTTVGDHDIFSNEDITANAGMYIHESCDGEIIYGDNPKEAPPAAKYFVK
CCEECCCCCEEEEECCCCCCCCCCCCEECCCEEEEECCCCEEEECCCCCCCCCHHHHEEE
GWWTDKHDKPIKEARILDTVKFHIQTQGIENPKGKKIEIKLFEYDTSVYLSLGTYGSGAV
EEECCCCCCCHHHHHHHHEEEEEEEECCCCCCCCCEEEEEEEEECCEEEEEECCCCCCCC
ETRPFDDHVRIVSGKNEITELTLDENGKTAITINLTWGMHEMFNETFFGGFAEMGLLEFY
CCCCCCCCEEEEECCCCEEEEEECCCCCEEEEEEEECCHHHHHHHHHCCCHHHHHHEEEE
FECSYGEDRGIWLPANLGDYLKVTISNQSLFIKPAYEGYNFPEIRTAEGDIVVFSAGIGL
EEECCCCCCCEEEECCCCCEEEEEECCCEEEEEECCCCCCCCCEEECCCCEEEEECCCCC
EHEPSKELEGQLDAIADKIKSEIYGSVREAMMKYSDNMRHTIAVRQLKKGYLANNLGKIE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEE
FSRRIYTKPVYDNSGKLYEITKAANFGYRKEGKKVTTKGISQLDYFREVGAFNEIAKASK
ECCEEEECCCCCCCCCEEEEEECCCCCCCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHH
ELLGIFNFASDVISFAMDENPKIIPTGFAPLDFLVAMVMPSIAESILESWDAPVFELVEK
HHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
AKDKGIEGIYDFLQSSGGKEKRYDFNTMDINQYMLNQLLMGKFKTFEELTNAQENLKITM
HHHCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
DRYDYESSLVYTLFYYKKIDEAKEEELLIIDTIFFN
EECCCCCCEEEEEHHHHHHCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA