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The map label for this gene is 146300965

Identifier: 146300965

GI number: 146300965

Start: 3836656

End: 3838512

Strand: Direct

Name: 146300965

Synonym: Fjoh_3220

Alternate gene names: NA

Gene position: 3836656-3838512 (Clockwise)

Preceding gene: 146300964

Following gene: 146300966

Centisome position: 62.93

GC content: 40.28

Gene sequence:

>1857_bases
ATGGCATTACAAACAATAACCACCATTAAAGTAGGCGAAATCAGGATTACCAATTTTAATAAATTAAAGATATTTCAAAC
CATCCACGACCACCATACTTTTTCATTTGAAGTAAGACAGGATTTATTAGTTGACGAGTTTAAAAGTGTGATGCCTTTTT
CCCAGAAACTGTACGGCGAGAAAATCAGCATCGAAATAAAACCTATAGACGGCCTGGAAGATCTTATGATTGGCGCAGAC
CTTAAACATTATACCATGCAGTTCTATGGTGTTGTGACCAAAGTAAAACTGAAGAAATCCCGTGTAAAAGATATAGAAGA
AATTATCGTAATAAAAGGAAAAAGCTCCACGATAGCACTCGAAAACGGTCCCGAATGCAGTTCTTTTACCAATATGACCC
TGAGTGATATTGTAACCAAAGTAAAATCAGGCTGTGATATTGATATGGATGTAAGACCTTTTTATTTAGAAAACCTGCCT
TATACGGTGCAGTATAACGAAAGTAATTTTTCTTTTCTAAACCGTCTGGCAAAAAGAAACGGACACTGGCTGTATTATAA
CGGACGCACCACTGTTTTTGGAAGCCCCGGCGGTGTAGGCGGACAGCCCCAGTTAGTTTACGGGGTAAACATGCAGGATT
TTGATTATACCATTAAACTCCTGCCGGCAATGTTTAAAGTAATAGAAAATGACAACCGCGACGGCAGTTACAGAACCGAT
GAAACCTTAAAATACAGAAGGGAAGCCGACGGTTTTCAGCAGAATTTTTTAAATAAGTCTAATGAGTTCTTTAATAAAGA
AACCATAATACAGCTCAACCAAAATCCTGTTGGAGGATCTGCACGACGCTCCTCAGAAGAATATGCCAAAAACAAAATGC
GCGCTATTTTAAGCCGTTTAACAGAAGTAAAAGCCTCCAGCGAAGTTCCGGGAATTACGATAGGAAATGAAGTCAGGATA
GCAGGTGTCGACGTACAGCTGGAAAGCTCCTACCGCGTAATACAGATAACCCACATCTGCGACGACGGAGGCGGTTATGA
AAATTATTTTACTGCCGTAAACTTTAACGGTTCTGTATTCTCTCCCAAAACCGACCCTGATTTAGTGCCGTTCTGCAGAA
GCCAGACCGCCATTGTAACGGGCAATGCAGACCCGGACGGACTCAGCGGCATACAGGTGCAGATGCCGTGGCAGGAAGCC
AAAGGCGAAACCACTCCTTATATTCCCTTCGTGCAGAAATACGGAGGCGATGCCAGAGGAATCCATACGCTGCCGGAAAT
TGGCGATACAGTTTTTGTGGATTTTCAGTGTAATAATGCCGAACTGCCTATTGCAATGGGAACCATAACCAGCAGAAAAG
AAAAAAGTGGTTTCAGCACGCCTAATAATGATCTGAAAGTGATGAGAACGCGAAGCGGAATTGAGACTCTTCGCAATGAT
GCAGAAGGGAGCTGGAAACAGAGTACGCCCGATGGAAATTATTTACTCTTTGACGGACAAGGAAATGCAACACTAAATGT
TCTTAAAAACTTCACTATAAATGTTGGTGAGGATTTAAATATTAATGTTGAAAGGAATATGACTGCTGATGTTGTAAACG
ATAAAACAGATACTGTAGGTGGCAATTATAGGGAAACCATAAATGGGTCTAAATACATATCCATAGGTATTGATTTTATA
ATTAGGGTGATGGGCTGTTTTAAAGAATATGTAAAAGGTAGAATTGAATCACACTCAGATAAAGAGCGAAAAGAGATTGG
TTTAAAAGGAGTTGAAACAAGCAGTGAAGGCTCTATTAGTAAACATGCGCAAAAAAACTTGAATAACAATAGCGGAGAAA
ATTCGACCCACAACTAA

Upstream 100 bases:

>100_bases
ATAAGACCGATAAATATTTTGTTGTTTTTCAAAAATTCAAATCCTCTAATCATCCTCAGATAGAAGCATATATATCCAGT
AATTAATTAAAACAACCAGC

Downstream 100 bases:

>100_bases
AACATTGAAAATATGAGACTACGATTTTCTGAAAGCGAGATTATAAAAACGACCGTTGGAGATCACGATATTTTTTCTAA
TGAAGATATTACTGCAAACG

Product: Rhs element Vgr protein

Products: NA

Alternate protein names: Rhs Element Vgr Protein Family Protein; Rhs Family Protein; LOW QUALITY PROTEIN Rhs Element Vgr Protein Family Protein; Type VI Secretion System Vgr Family Protein; VgrG Family T6SS G

Number of amino acids: Translated: 618; Mature: 617

Protein sequence:

>618_residues
MALQTITTIKVGEIRITNFNKLKIFQTIHDHHTFSFEVRQDLLVDEFKSVMPFSQKLYGEKISIEIKPIDGLEDLMIGAD
LKHYTMQFYGVVTKVKLKKSRVKDIEEIIVIKGKSSTIALENGPECSSFTNMTLSDIVTKVKSGCDIDMDVRPFYLENLP
YTVQYNESNFSFLNRLAKRNGHWLYYNGRTTVFGSPGGVGGQPQLVYGVNMQDFDYTIKLLPAMFKVIENDNRDGSYRTD
ETLKYRREADGFQQNFLNKSNEFFNKETIIQLNQNPVGGSARRSSEEYAKNKMRAILSRLTEVKASSEVPGITIGNEVRI
AGVDVQLESSYRVIQITHICDDGGGYENYFTAVNFNGSVFSPKTDPDLVPFCRSQTAIVTGNADPDGLSGIQVQMPWQEA
KGETTPYIPFVQKYGGDARGIHTLPEIGDTVFVDFQCNNAELPIAMGTITSRKEKSGFSTPNNDLKVMRTRSGIETLRND
AEGSWKQSTPDGNYLLFDGQGNATLNVLKNFTINVGEDLNINVERNMTADVVNDKTDTVGGNYRETINGSKYISIGIDFI
IRVMGCFKEYVKGRIESHSDKERKEIGLKGVETSSEGSISKHAQKNLNNNSGENSTHN

Sequences:

>Translated_618_residues
MALQTITTIKVGEIRITNFNKLKIFQTIHDHHTFSFEVRQDLLVDEFKSVMPFSQKLYGEKISIEIKPIDGLEDLMIGAD
LKHYTMQFYGVVTKVKLKKSRVKDIEEIIVIKGKSSTIALENGPECSSFTNMTLSDIVTKVKSGCDIDMDVRPFYLENLP
YTVQYNESNFSFLNRLAKRNGHWLYYNGRTTVFGSPGGVGGQPQLVYGVNMQDFDYTIKLLPAMFKVIENDNRDGSYRTD
ETLKYRREADGFQQNFLNKSNEFFNKETIIQLNQNPVGGSARRSSEEYAKNKMRAILSRLTEVKASSEVPGITIGNEVRI
AGVDVQLESSYRVIQITHICDDGGGYENYFTAVNFNGSVFSPKTDPDLVPFCRSQTAIVTGNADPDGLSGIQVQMPWQEA
KGETTPYIPFVQKYGGDARGIHTLPEIGDTVFVDFQCNNAELPIAMGTITSRKEKSGFSTPNNDLKVMRTRSGIETLRND
AEGSWKQSTPDGNYLLFDGQGNATLNVLKNFTINVGEDLNINVERNMTADVVNDKTDTVGGNYRETINGSKYISIGIDFI
IRVMGCFKEYVKGRIESHSDKERKEIGLKGVETSSEGSISKHAQKNLNNNSGENSTHN
>Mature_617_residues
ALQTITTIKVGEIRITNFNKLKIFQTIHDHHTFSFEVRQDLLVDEFKSVMPFSQKLYGEKISIEIKPIDGLEDLMIGADL
KHYTMQFYGVVTKVKLKKSRVKDIEEIIVIKGKSSTIALENGPECSSFTNMTLSDIVTKVKSGCDIDMDVRPFYLENLPY
TVQYNESNFSFLNRLAKRNGHWLYYNGRTTVFGSPGGVGGQPQLVYGVNMQDFDYTIKLLPAMFKVIENDNRDGSYRTDE
TLKYRREADGFQQNFLNKSNEFFNKETIIQLNQNPVGGSARRSSEEYAKNKMRAILSRLTEVKASSEVPGITIGNEVRIA
GVDVQLESSYRVIQITHICDDGGGYENYFTAVNFNGSVFSPKTDPDLVPFCRSQTAIVTGNADPDGLSGIQVQMPWQEAK
GETTPYIPFVQKYGGDARGIHTLPEIGDTVFVDFQCNNAELPIAMGTITSRKEKSGFSTPNNDLKVMRTRSGIETLRNDA
EGSWKQSTPDGNYLLFDGQGNATLNVLKNFTINVGEDLNINVERNMTADVVNDKTDTVGGNYRETINGSKYISIGIDFII
RVMGCFKEYVKGRIESHSDKERKEIGLKGVETSSEGSISKHAQKNLNNNSGENSTHN

Specific function: Unknown

COG id: COG3501

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69186; Mature: 69055

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALQTITTIKVGEIRITNFNKLKIFQTIHDHHTFSFEVRQDLLVDEFKSVMPFSQKLYGE
CCCEEEEEEEECEEEEECCCEEEEEEEHHCCCEEEEHHHHHHHHHHHHHHCCHHHHHCCC
KISIEIKPIDGLEDLMIGADLKHYTMQFYGVVTKVKLKKSRVKDIEEIIVIKGKSSTIAL
EEEEEEECCCCHHHHHCCCCHHHHHHHHHHHHEEEEEHHHHHCCCEEEEEEECCCCEEEE
ENGPECSSFTNMTLSDIVTKVKSGCDIDMDVRPFYLENLPYTVQYNESNFSFLNRLAKRN
CCCCCCCHHCCCCHHHHHHHHHCCCCCCCCCCCEEECCCCEEEEECCCCHHHHHHHHHCC
GHWLYYNGRTTVFGSPGGVGGQPQLVYGVNMQDFDYTIKLLPAMFKVIENDNRDGSYRTD
CCEEEECCEEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
ETLKYRREADGFQQNFLNKSNEFFNKETIIQLNQNPVGGSARRSSEEYAKNKMRAILSRL
HHHHHHHHCCHHHHHHHCCCHHHCCCEEEEEECCCCCCCCHHCCHHHHHHHHHHHHHHHH
TEVKASSEVPGITIGNEVRIAGVDVQLESSYRVIQITHICDDGGGYENYFTAVNFNGSVF
HHHHCCCCCCCEEECCEEEEEEEEEEECCCEEEEEEEEEECCCCCCCCEEEEEECCCCEE
SPKTDPDLVPFCRSQTAIVTGNADPDGLSGIQVQMPWQEAKGETTPYIPFVQKYGGDARG
CCCCCCCCCHHCCCCEEEEECCCCCCCCCCEEEEECHHHCCCCCCCCCHHHHHCCCCCCC
IHTLPEIGDTVFVDFQCNNAELPIAMGTITSRKEKSGFSTPNNDLKVMRTRSGIETLRND
CCCCCCCCCEEEEEEEECCCCCCEEECCCCCCHHHCCCCCCCCCEEEEEEHHHHHHHHCC
AEGSWKQSTPDGNYLLFDGQGNATLNVLKNFTINVGEDLNINVERNMTADVVNDKTDTVG
CCCCCCCCCCCCCEEEEECCCCCEEEEEECCEEECCCCEEEEEECCCEEECCCCCCCCCC
GNYRETINGSKYISIGIDFIIRVMGCFKEYVKGRIESHSDKERKEIGLKGVETSSEGSIS
CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCHH
KHAQKNLNNNSGENSTHN
HHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
ALQTITTIKVGEIRITNFNKLKIFQTIHDHHTFSFEVRQDLLVDEFKSVMPFSQKLYGE
CCEEEEEEEECEEEEECCCEEEEEEEHHCCCEEEEHHHHHHHHHHHHHHCCHHHHHCCC
KISIEIKPIDGLEDLMIGADLKHYTMQFYGVVTKVKLKKSRVKDIEEIIVIKGKSSTIAL
EEEEEEECCCCHHHHHCCCCHHHHHHHHHHHHEEEEEHHHHHCCCEEEEEEECCCCEEEE
ENGPECSSFTNMTLSDIVTKVKSGCDIDMDVRPFYLENLPYTVQYNESNFSFLNRLAKRN
CCCCCCCHHCCCCHHHHHHHHHCCCCCCCCCCCEEECCCCEEEEECCCCHHHHHHHHHCC
GHWLYYNGRTTVFGSPGGVGGQPQLVYGVNMQDFDYTIKLLPAMFKVIENDNRDGSYRTD
CCEEEECCEEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
ETLKYRREADGFQQNFLNKSNEFFNKETIIQLNQNPVGGSARRSSEEYAKNKMRAILSRL
HHHHHHHHCCHHHHHHHCCCHHHCCCEEEEEECCCCCCCCHHCCHHHHHHHHHHHHHHHH
TEVKASSEVPGITIGNEVRIAGVDVQLESSYRVIQITHICDDGGGYENYFTAVNFNGSVF
HHHHCCCCCCCEEECCEEEEEEEEEEECCCEEEEEEEEEECCCCCCCCEEEEEECCCCEE
SPKTDPDLVPFCRSQTAIVTGNADPDGLSGIQVQMPWQEAKGETTPYIPFVQKYGGDARG
CCCCCCCCCHHCCCCEEEEECCCCCCCCCCEEEEECHHHCCCCCCCCCHHHHHCCCCCCC
IHTLPEIGDTVFVDFQCNNAELPIAMGTITSRKEKSGFSTPNNDLKVMRTRSGIETLRND
CCCCCCCCCEEEEEEEECCCCCCEEECCCCCCHHHCCCCCCCCCEEEEEEHHHHHHHHCC
AEGSWKQSTPDGNYLLFDGQGNATLNVLKNFTINVGEDLNINVERNMTADVVNDKTDTVG
CCCCCCCCCCCCCEEEEECCCCCEEEEEECCEEECCCCEEEEEECCCEEECCCCCCCCCC
GNYRETINGSKYISIGIDFIIRVMGCFKEYVKGRIESHSDKERKEIGLKGVETSSEGSIS
CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCHH
KHAQKNLNNNSGENSTHN
HHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA