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The map label for this gene is ape1 [H]

Identifier: 146300617

GI number: 146300617

Start: 3405047

End: 3406702

Strand: Reverse

Name: ape1 [H]

Synonym: Fjoh_2868

Alternate gene names: 146300617

Gene position: 3406702-3405047 (Counterclockwise)

Preceding gene: 146300619

Following gene: 146300616

Centisome position: 55.88

GC content: 34.66

Gene sequence:

>1656_bases
ATGAAAAAATACTTTGGAAGTGTTATAACAGCTTTTCTAATTGGTTTTGCAGCCAATGCCCAAGGACTTTTAAATAAGTC
AGAAACTGTTTTTACACATCAGGATAGCTTACGCGGAAGTATTACAAAAGAAAGAGCCTGGTGGGATTTGAAATATTATC
ATCTTGACATTAAGGTGAATCCGACAGATAGAACCATTTCCGGAACTAATACTGTCCGTTATACGGTTTTAAATGAATAC
AACCGTATGCAGATTGATTTGCAGGAACCGATGAACATTACGAAAGTAACGCAGAATGGAAAAGATTTAAAGTTTGAAAG
AGACGGAAATGCTTTCTTTATTACTTTATCAGAAAATCAAAAAGCTGGAGAAACGAAAGAAATTATCGTTTCATTTGGAG
GAGTTCCAAAAGAAGCCGTACGTCCCCCTTGGGATGGCGGAATAACCTGGCAGAAAGATAAAAACGGAAAAGATTTTATC
GCTTCATCTTGTCAGGGATTAGGTGCGAGTGTTTGGTGGCCTTGTAAAGACCATATGTACGATGAAGTAGAGAATATGCT
GATCAGCGTAAATGTTCCTGGGAATTTAACTGATGTTTCAAATGGAAGGCTGCAAAGCGTTAAAAAACAAAAAGATGGAA
CTAAAACTTTCAATTGGTATGTCGCTAATCCAATTAACAATTACGGCGTAAATATCAATATTGGGGATTACGTTAATTTC
TCAGAAAAATTTAAAGGAGAAAAAGGCGATTTAGATTGTAATTATTATGTTTTGAGAGATAATCTGGCTAAAGCAAAAGA
ACAGTTTAAAGATGCTCCTAAAATGCTTAAAGCTTTTGAAAGCTGGTTTGGACCTTATCCGTTTTACGAAGACAGTTACA
AATTGGTCGAAGTTCCGTATTTAGGCATGGAACATCAAAGCTCGGTAACTTACGGGAACAATTACCAAAACGGTCATAAC
GGACATGATATAAGCGGAACAGGCTGGGGATTGAAATTTGATTATATCATTATTCATGAATCGGGTCATGAATGGTTTGC
TAATAATATTACCTATAAAGACATTGCCGATATGTGGATTCATGAAAGTTTTACGACATATTCAGAAGTTCTTTTTATAG
AATATTATTATGGAAAAGATGCTGCAAATGAATACGCTAGAGGAATTAGAAAAATGATTGCGAATAAAGAACCTATTATT
GGGCATTATGATGTAAACAGAGAAGGTTCTGGCGATATGTACCCGAAAGGCGCTAATATGATTCACACGATTCGTCAGGT
GATTAATGATGATGCAAAATTTAAAGCGATTCTTCGCGGTATGAACAAAACGTTTTATCATCAAACCGTTACCACAAAAC
AGATTGAAGACTATATTAGTAAAGAATCTGGAATTGATTTCAGTGCGGTTTTTAATCAGTATTTAAGAACGCCTCAGGTG
CCTGTTTTTGAATATTATTTTAAAAATCAAAAATTAGCGTATCACTGGATTAATTGTCAGGAAAATTTTGATCTTCCTTT
AAAGGTCATTTTAAACGGTGTAGAAACCTGGCTAAAACCAACATCAGATTGGCAGGCGAAAGATTTAAACAGCGAAAAAA
CAGTTTTAACTGTAGATAAAAACTTTTATGTGATTGAATCTAATATCACTAATTAA

Upstream 100 bases:

>100_bases
AGCTAAAATAGAAAACAAAACTATATATGAATACTAATTTTGTAACATAAATTGGAAATGTATACTAATATTATAACTAA
TTCAAAACTTAATTTATATA

Downstream 100 bases:

>100_bases
GTTTTTAAAATAACTAAAAATGAAACCCAATAAATTTCTTATTTATTGGGTTTGTTTTTTATGAAGAAATCATAAAATTT
TAGAATTCTTAATCCGAATG

Product: peptidase M1, membrane alanine aminopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 551; Mature: 551

Protein sequence:

>551_residues
MKKYFGSVITAFLIGFAANAQGLLNKSETVFTHQDSLRGSITKERAWWDLKYYHLDIKVNPTDRTISGTNTVRYTVLNEY
NRMQIDLQEPMNITKVTQNGKDLKFERDGNAFFITLSENQKAGETKEIIVSFGGVPKEAVRPPWDGGITWQKDKNGKDFI
ASSCQGLGASVWWPCKDHMYDEVENMLISVNVPGNLTDVSNGRLQSVKKQKDGTKTFNWYVANPINNYGVNINIGDYVNF
SEKFKGEKGDLDCNYYVLRDNLAKAKEQFKDAPKMLKAFESWFGPYPFYEDSYKLVEVPYLGMEHQSSVTYGNNYQNGHN
GHDISGTGWGLKFDYIIIHESGHEWFANNITYKDIADMWIHESFTTYSEVLFIEYYYGKDAANEYARGIRKMIANKEPII
GHYDVNREGSGDMYPKGANMIHTIRQVINDDAKFKAILRGMNKTFYHQTVTTKQIEDYISKESGIDFSAVFNQYLRTPQV
PVFEYYFKNQKLAYHWINCQENFDLPLKVILNGVETWLKPTSDWQAKDLNSEKTVLTVDKNFYVIESNITN

Sequences:

>Translated_551_residues
MKKYFGSVITAFLIGFAANAQGLLNKSETVFTHQDSLRGSITKERAWWDLKYYHLDIKVNPTDRTISGTNTVRYTVLNEY
NRMQIDLQEPMNITKVTQNGKDLKFERDGNAFFITLSENQKAGETKEIIVSFGGVPKEAVRPPWDGGITWQKDKNGKDFI
ASSCQGLGASVWWPCKDHMYDEVENMLISVNVPGNLTDVSNGRLQSVKKQKDGTKTFNWYVANPINNYGVNINIGDYVNF
SEKFKGEKGDLDCNYYVLRDNLAKAKEQFKDAPKMLKAFESWFGPYPFYEDSYKLVEVPYLGMEHQSSVTYGNNYQNGHN
GHDISGTGWGLKFDYIIIHESGHEWFANNITYKDIADMWIHESFTTYSEVLFIEYYYGKDAANEYARGIRKMIANKEPII
GHYDVNREGSGDMYPKGANMIHTIRQVINDDAKFKAILRGMNKTFYHQTVTTKQIEDYISKESGIDFSAVFNQYLRTPQV
PVFEYYFKNQKLAYHWINCQENFDLPLKVILNGVETWLKPTSDWQAKDLNSEKTVLTVDKNFYVIESNITN
>Mature_551_residues
MKKYFGSVITAFLIGFAANAQGLLNKSETVFTHQDSLRGSITKERAWWDLKYYHLDIKVNPTDRTISGTNTVRYTVLNEY
NRMQIDLQEPMNITKVTQNGKDLKFERDGNAFFITLSENQKAGETKEIIVSFGGVPKEAVRPPWDGGITWQKDKNGKDFI
ASSCQGLGASVWWPCKDHMYDEVENMLISVNVPGNLTDVSNGRLQSVKKQKDGTKTFNWYVANPINNYGVNINIGDYVNF
SEKFKGEKGDLDCNYYVLRDNLAKAKEQFKDAPKMLKAFESWFGPYPFYEDSYKLVEVPYLGMEHQSSVTYGNNYQNGHN
GHDISGTGWGLKFDYIIIHESGHEWFANNITYKDIADMWIHESFTTYSEVLFIEYYYGKDAANEYARGIRKMIANKEPII
GHYDVNREGSGDMYPKGANMIHTIRQVINDDAKFKAILRGMNKTFYHQTVTTKQIEDYISKESGIDFSAVFNQYLRTPQV
PVFEYYFKNQKLAYHWINCQENFDLPLKVILNGVETWLKPTSDWQAKDLNSEKTVLTVDKNFYVIESNITN

Specific function: Unknown

COG id: COG0308

COG function: function code E; Aminopeptidase N

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001930
- InterPro:   IPR014782 [H]

Pfam domain/function: PF01433 Peptidase_M1 [H]

EC number: NA

Molecular weight: Translated: 63485; Mature: 63485

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYFGSVITAFLIGFAANAQGLLNKSETVFTHQDSLRGSITKERAWWDLKYYHLDIKVN
CCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHCCCCCCCCEEEEEEEEEEEEEEC
PTDRTISGTNTVRYTVLNEYNRMQIDLQEPMNITKVTQNGKDLKFERDGNAFFITLSENQ
CCCCEECCCCEEEEEEECCCCEEEEEECCCCCEEEEECCCCCEEEEECCCEEEEEECCCC
KAGETKEIIVSFGGVPKEAVRPPWDGGITWQKDKNGKDFIASSCQGLGASVWWPCKDHMY
CCCCCEEEEEEECCCCHHHCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCEECCCHHHHH
DEVENMLISVNVPGNLTDVSNGRLQSVKKQKDGTKTFNWYVANPINNYGVNINIGDYVNF
HHHCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEECCCCCC
SEKFKGEKGDLDCNYYVLRDNLAKAKEQFKDAPKMLKAFESWFGPYPFYEDSYKLVEVPY
HHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECC
LGMEHQSSVTYGNNYQNGHNGHDISGTGWGLKFDYIIIHESGHEWFANNITYKDIADMWI
CCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHCCCCHHHHHHHHH
HESFTTYSEVLFIEYYYGKDAANEYARGIRKMIANKEPIIGHYDVNREGSGDMYPKGANM
HHCHHCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHH
IHTIRQVINDDAKFKAILRGMNKTFYHQTVTTKQIEDYISKESGIDFSAVFNQYLRTPQV
HHHHHHHHCCCHHHHHHHHHCCHHHEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCC
PVFEYYFKNQKLAYHWINCQENFDLPLKVILNGVETWLKPTSDWQAKDLNSEKTVLTVDK
CCEEHEECCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEC
NFYVIESNITN
CEEEEECCCCC
>Mature Secondary Structure
MKKYFGSVITAFLIGFAANAQGLLNKSETVFTHQDSLRGSITKERAWWDLKYYHLDIKVN
CCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHCCCCCCCCEEEEEEEEEEEEEEC
PTDRTISGTNTVRYTVLNEYNRMQIDLQEPMNITKVTQNGKDLKFERDGNAFFITLSENQ
CCCCEECCCCEEEEEEECCCCEEEEEECCCCCEEEEECCCCCEEEEECCCEEEEEECCCC
KAGETKEIIVSFGGVPKEAVRPPWDGGITWQKDKNGKDFIASSCQGLGASVWWPCKDHMY
CCCCCEEEEEEECCCCHHHCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCEECCCHHHHH
DEVENMLISVNVPGNLTDVSNGRLQSVKKQKDGTKTFNWYVANPINNYGVNINIGDYVNF
HHHCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEECCCCCC
SEKFKGEKGDLDCNYYVLRDNLAKAKEQFKDAPKMLKAFESWFGPYPFYEDSYKLVEVPY
HHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECC
LGMEHQSSVTYGNNYQNGHNGHDISGTGWGLKFDYIIIHESGHEWFANNITYKDIADMWI
CCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHCCCCHHHHHHHHH
HESFTTYSEVLFIEYYYGKDAANEYARGIRKMIANKEPIIGHYDVNREGSGDMYPKGANM
HHCHHCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHH
IHTIRQVINDDAKFKAILRGMNKTFYHQTVTTKQIEDYISKESGIDFSAVFNQYLRTPQV
HHHHHHHHCCCHHHHHHHHHCCHHHEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCC
PVFEYYFKNQKLAYHWINCQENFDLPLKVILNGVETWLKPTSDWQAKDLNSEKTVLTVDK
CCEEHEECCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEC
NFYVIESNITN
CEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11427726 [H]