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The map label for this gene is yciH [C]

Identifier: 146300588

GI number: 146300588

Start: 3369976

End: 3370308

Strand: Reverse

Name: yciH [C]

Synonym: Fjoh_2838

Alternate gene names: 146300588

Gene position: 3370308-3369976 (Counterclockwise)

Preceding gene: 146300589

Following gene: 146300587

Centisome position: 55.28

GC content: 33.33

Gene sequence:

>333_bases
ATGGACTTAAAAGATCAATTAAAAAACTTATTTCCCGATCACGTAGAAACAAATGAACCAGAGGAAATTCAGGAACAAGA
TCACGTTTTATATGTGCAGAAAGAACCTATGATCTGTAAATTCGAAAAGCGAAAAGGAAAACCCACAACCATAATTGAAG
GTTACGAAGGAAGTGATGAAGATTTTAAAGTATTAGCCAAAGAAATAAAAACAAAATTAAGCGTTGGCGGTACTTTTAAA
GACGACTCAATCATTATACAAGGTGATTACCGCGACAAAATTATGGCCATTTTAAAAGAAAAAGGATTTAAAACTAAAAG
AGTCGGCGGGTAA

Upstream 100 bases:

>100_bases
AGGATAAAAAATTCCAAATTCCAAACTCTGTTATGGGGTTTGGAATTTAATTTTTAAATACCTTTATGGTTGGAAATTTA
TTTTACAGAATTAAAAAAAT

Downstream 100 bases:

>100_bases
AAATAGTTTCACGTTTAAAGTTTCAAGTTACGCAGCCTGAAACCTGAAACAAAAAGACTTAGAACCTTAATATCTCAGAA
TCTTAGCAACTTAAAAAAAA

Product: translation initiation factor SUI1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MDLKDQLKNLFPDHVETNEPEEIQEQDHVLYVQKEPMICKFEKRKGKPTTIIEGYEGSDEDFKVLAKEIKTKLSVGGTFK
DDSIIIQGDYRDKIMAILKEKGFKTKRVGG

Sequences:

>Translated_110_residues
MDLKDQLKNLFPDHVETNEPEEIQEQDHVLYVQKEPMICKFEKRKGKPTTIIEGYEGSDEDFKVLAKEIKTKLSVGGTFK
DDSIIIQGDYRDKIMAILKEKGFKTKRVGG
>Mature_110_residues
MDLKDQLKNLFPDHVETNEPEEIQEQDHVLYVQKEPMICKFEKRKGKPTTIIEGYEGSDEDFKVLAKEIKTKLSVGGTFK
DDSIIIQGDYRDKIMAILKEKGFKTKRVGG

Specific function: Unknown

COG id: COG0023

COG function: function code J; Translation initiation factor 1 (eIF-1/SUI1) and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SUI1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022851
- InterPro:   IPR005872
- InterPro:   IPR001950 [H]

Pfam domain/function: PF01253 SUI1 [H]

EC number: NA

Molecular weight: Translated: 12662; Mature: 12662

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: PS50296 SUI1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLKDQLKNLFPDHVETNEPEEIQEQDHVLYVQKEPMICKFEKRKGKPTTIIEGYEGSDE
CCHHHHHHHHCCCCCCCCCCHHHCCCCCEEEEECCCCEEEEECCCCCCCEEEECCCCCCH
DFKVLAKEIKTKLSVGGTFKDDSIIIQGDYRDKIMAILKEKGFKTKRVGG
HHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MDLKDQLKNLFPDHVETNEPEEIQEQDHVLYVQKEPMICKFEKRKGKPTTIIEGYEGSDE
CCHHHHHHHHCCCCCCCCCCHHHCCCCCEEEEECCCCEEEEECCCCCCCEEEECCCCCCH
DFKVLAKEIKTKLSVGGTFKDDSIIIQGDYRDKIMAILKEKGFKTKRVGG
HHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA