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The map label for this gene is udp [H]

Identifier: 146300587

GI number: 146300587

Start: 3369006

End: 3369875

Strand: Reverse

Name: udp [H]

Synonym: Fjoh_2837

Alternate gene names: 146300587

Gene position: 3369875-3369006 (Counterclockwise)

Preceding gene: 146300588

Following gene: 146300586

Centisome position: 55.27

GC content: 32.87

Gene sequence:

>870_bases
ATGATAAAAGAATCAGAATTAATACTTAATCCAGATGGAAGCGTTTACCACTTAAACCTTCGTCCTGAACATATTGCCAA
CGATATAATTTTTGTTGGAGACCAAAACAGAGTCGAAAAAATCACCCAGTTTTTTGATTCAATCGAATATTCAACTCAAA
AAAGAGAATTTAAAACCCAAACCGGAATTTACAAAGGAAAAAGAATTTCTGTAATGTCTACCGGAATTGGTCCTGATAAT
ATTGATATTGTAATTAATGAGCTGGATGCTCTTGTAAATATTGATTTAAAAACACGTCAGCCAAAAGAAAAATTGACATC
TTTAAATATTATCAGAATCGGGACTTCGGGTTCATTACAAGCCGATATTCCTGTTGACAGTTTTGTAATGTCAAAATTCG
GACTAGGACTTGATAATATGCTTCGATCCTATTTAATAGATGAAGTTTCAAATGCTGGACTCGAAGATGCTTTCATTCAG
CATACCAATTGGGATATTAAAAAAGGAAGACCTTACGTGATTCCATGTTCTGAAAAACTGGAAAAAATTATCGAATCTGA
TAAAATTTTTAAAGGAATAACTGCTACAGCCGGAGGATTTTATGGTCCGCAGGGACGCGTTTTACGTTTAAATATCCAAG
ATGAGGAATTGAACAGCAAAATGGATAATTTTAATTTTAATGATAAACGCATTACCAATTTAGAGATGGAAACAGCAGCA
ATTTATGGGCTTTCTTCTCTTTTAGGACATAATGCCTTATCTTTAAATGCTATTATTGCCAATCGAGCTTCGGGAACTTT
TAGTGAAGATCCTTATAAAGCAGTAGACCAATTAATTACATATACATTAAATAAATTGGCAGGGAATTAA

Upstream 100 bases:

>100_bases
AAATAGTTTCACGTTTAAAGTTTCAAGTTACGCAGCCTGAAACCTGAAACAAAAAGACTTAGAACCTTAATATCTCAGAA
TCTTAGCAACTTAAAAAAAA

Downstream 100 bases:

>100_bases
TTAGAAAAATTGATAATTTTTAAAATCTAAAATTTATGTTTTTACGAGTTGCCAGACATACGAATGATTTAAAGAAAATC
GAGGATTTTTACGTTAATAT

Product: purine phosphorylase family 1

Products: NA

Alternate protein names: UPase; UrdPase [H]

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MIKESELILNPDGSVYHLNLRPEHIANDIIFVGDQNRVEKITQFFDSIEYSTQKREFKTQTGIYKGKRISVMSTGIGPDN
IDIVINELDALVNIDLKTRQPKEKLTSLNIIRIGTSGSLQADIPVDSFVMSKFGLGLDNMLRSYLIDEVSNAGLEDAFIQ
HTNWDIKKGRPYVIPCSEKLEKIIESDKIFKGITATAGGFYGPQGRVLRLNIQDEELNSKMDNFNFNDKRITNLEMETAA
IYGLSSLLGHNALSLNAIIANRASGTFSEDPYKAVDQLITYTLNKLAGN

Sequences:

>Translated_289_residues
MIKESELILNPDGSVYHLNLRPEHIANDIIFVGDQNRVEKITQFFDSIEYSTQKREFKTQTGIYKGKRISVMSTGIGPDN
IDIVINELDALVNIDLKTRQPKEKLTSLNIIRIGTSGSLQADIPVDSFVMSKFGLGLDNMLRSYLIDEVSNAGLEDAFIQ
HTNWDIKKGRPYVIPCSEKLEKIIESDKIFKGITATAGGFYGPQGRVLRLNIQDEELNSKMDNFNFNDKRITNLEMETAA
IYGLSSLLGHNALSLNAIIANRASGTFSEDPYKAVDQLITYTLNKLAGN
>Mature_289_residues
MIKESELILNPDGSVYHLNLRPEHIANDIIFVGDQNRVEKITQFFDSIEYSTQKREFKTQTGIYKGKRISVMSTGIGPDN
IDIVINELDALVNIDLKTRQPKEKLTSLNIIRIGTSGSLQADIPVDSFVMSKFGLGLDNMLRSYLIDEVSNAGLEDAFIQ
HTNWDIKKGRPYVIPCSEKLEKIIESDKIFKGITATAGGFYGPQGRVLRLNIQDEELNSKMDNFNFNDKRITNLEMETAA
IYGLSSLLGHNALSLNAIIANRASGTFSEDPYKAVDQLITYTLNKLAGN

Specific function: Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synth

COG id: COG2820

COG function: function code F; Uridine phosphorylase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PNP/UDP phosphorylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018017
- InterPro:   IPR018016
- InterPro:   IPR000845
- InterPro:   IPR010058 [H]

Pfam domain/function: PF01048 PNP_UDP_1 [H]

EC number: =2.4.2.3 [H]

Molecular weight: Translated: 32297; Mature: 32297

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKESELILNPDGSVYHLNLRPEHIANDIIFVGDQNRVEKITQFFDSIEYSTQKREFKTQ
CCCCCCEEECCCCCEEEEECCHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
TGIYKGKRISVMSTGIGPDNIDIVINELDALVNIDLKTRQPKEKLTSLNIIRIGTSGSLQ
HCCCCCCEEEEEECCCCCCCCEEEEEECCEEEEECCCCCCCHHHHCEEEEEEECCCCCEE
ADIPVDSFVMSKFGLGLDNMLRSYLIDEVSNAGLEDAFIQHTNWDIKKGRPYVIPCSEKL
ECCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCEEEECHHHH
EKIIESDKIFKGITATAGGFYGPQGRVLRLNIQDEELNSKMDNFNFNDKRITNLEMETAA
HHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECHHHHHHHHCCCCCCCCEEEEEEHHHHH
IYGLSSLLGHNALSLNAIIANRASGTFSEDPYKAVDQLITYTLNKLAGN
HHHHHHHHCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIKESELILNPDGSVYHLNLRPEHIANDIIFVGDQNRVEKITQFFDSIEYSTQKREFKTQ
CCCCCCEEECCCCCEEEEECCHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
TGIYKGKRISVMSTGIGPDNIDIVINELDALVNIDLKTRQPKEKLTSLNIIRIGTSGSLQ
HCCCCCCEEEEEECCCCCCCCEEEEEECCEEEEECCCCCCCHHHHCEEEEEEECCCCCEE
ADIPVDSFVMSKFGLGLDNMLRSYLIDEVSNAGLEDAFIQHTNWDIKKGRPYVIPCSEKL
ECCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCEEEECHHHH
EKIIESDKIFKGITATAGGFYGPQGRVLRLNIQDEELNSKMDNFNFNDKRITNLEMETAA
HHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECHHHHHHHHCCCCCCCCEEEEEEHHHHH
IYGLSSLLGHNALSLNAIIANRASGTFSEDPYKAVDQLITYTLNKLAGN
HHHHHHHHCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]